prot_S-ischiensis_contig11.2117.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2117.1
Unique Nameprot_S-ischiensis_contig11.2117.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length81
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig11.2117.1 vs. uniprot
Match: D7FHX5_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX5_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 7.750e-6
Identity = 25/54 (46.30%), Postives = 33/54 (61.11%), Query Frame = 0 
Query:   36 RLPSWAQFCGRS--------GQVWFWDEETGETAWEPPGEAVGQAWGWLRAWDE 81
            RLP W Q+C  S         Q +F +EETGE++W  P +AV ++ GWLRAW E
Sbjct:  744 RLPLWVQWCSYSPHDGDDTNNQPYFVNEETGESSWVLPPDAVAESRGWLRAWSE 797
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHX5_ECTSI7.750e-646.30WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 38..67
score: 10.147
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 35..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:1314931..1315173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2117.1mRNA_S-ischiensis_contig11.2117.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 1314931..1315173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2117.1 ID=prot_S-ischiensis_contig11.2117.1|Name=mRNA_S-ischiensis_contig11.2117.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=81bp
SCLGWPDPVGSASTGPSSSWYEGGGGGGRGHDWHGRLPSWAQFCGRSGQV
WFWDEETGETAWEPPGEAVGQAWGWLRAWDE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf