prot_S-ischiensis_contig11.2045.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2045.1
Unique Nameprot_S-ischiensis_contig11.2045.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length185
Homology
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BLAST of mRNA_S-ischiensis_contig11.2045.1 vs. uniprot
Match: A0A6H5KZ38_9PHAE (Myosin motor domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ38_9PHAE)

HSP 1 Score: 137 bits (344), Expect = 5.620e-34
Identity = 78/178 (43.82%), Postives = 115/178 (64.61%), Query Frame = 0 
Query:    7 MQTTWRMHRARARFVAVRRKVVKVQSIARCLLAKRELDQLRDEDYDRTIKHLKHGVTLTKHTVGSNLKMTKVKGLVFTLDPQGGVLSWNGLGVRGKE-GLNIFRDIKDLTKGISSKTLMKTGEPAKGEGETPEER--RERAGGVYLVLHEVSGGRTVDLEAVDYAQRDSLFRTISRLR 181
            +QT WR H AR  F+  R++   VQS  R  +A+++ +++R EDY  TI  L+ G+T+ KHTVG++ +    + + FT   +G VLSWNGLG+  KE  +NI  D+  +TKGI+S+TL +TGE AKG+G     R  +    G YLVLH+ SG +T+DLE   Y QRDS+ R +S+++
Sbjct: 1135 IQTAWRKHAARKAFIVRRKQTAVVQSFYRRRVARQQFEKMRLEDYKFTINELRGGMTMVKHTVGTSFRRKTKRPIEFTCSNRG-VLSWNGLGMMRKEQSVNIASDVLKITKGITSRTLRRTGEAAKGDGVATRTRPGQVNGSGNYLVLHQRSG-KTLDLECESYTQRDSVKRALSKIK 1310
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BLAST of mRNA_S-ischiensis_contig11.2045.1 vs. uniprot
Match: D8LTJ6_ECTSI (Myosin IA, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ6_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 2.360e-28
Identity = 76/196 (38.78%), Postives = 115/196 (58.67%), Query Frame = 0 
Query:    7 MQTTWRMHRARARFVAVRRKVVKVQSIARCLLAKRELDQLRDEDYDRTIKHLKHGVTLTKHTVGSNLKMTKVKGLVFTLDPQGGVLSWNGLGVRGKE-GLNIFRDI------------------KDLTKGISSKTLMKTGEPAKGEGETPEER--RERAGGVYLVLHEVSGGRTVDLEAVDYAQRDSLFRTISRLR 181
            +QT WR H AR  F+  R++   VQS  R  +A+++ ++L  EDY  TI+ L+ G+T+ KHTVG++ +    + + FT   +G VLSW+GLG+  KE  +NI  D+                  + +TKGI+S+TL +TGE AKG+G     R  +    G YLVLH+ SG +T+DLE   Y  RDS+ R +S+++
Sbjct:  797 IQTAWRKHAARKAFMVRRKQTAVVQSCYRRRVARQQFEKLLLEDYKVTIRELRGGMTMVKHTVGTSFRRKTKRPIEFTCSNRG-VLSWDGLGMMRKEQSVNIASDVLKIGREDGGVWVDPSSMSQKITKGITSRTLRRTGEAAKGDGVATRTRPGQVNGSGNYLVLHQRSG-KTLDLECESYTHRDSVKRALSKIK 990
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KZ38_9PHAE5.620e-3443.82Myosin motor domain-containing protein n=1 Tax=Ect... [more]
D8LTJ6_ECTSI2.360e-2838.78Myosin IA, putative n=1 Tax=Ectocarpus siliculosus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.5.190coord: 2..50
e-value: 2.0E-6
score: 29.3
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 7..20
e-value: 0.18
score: 11.7
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 24..52
score: 6.723

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:640422..643974 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2045.1mRNA_S-ischiensis_contig11.2045.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 639851..644092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2045.1 ID=prot_S-ischiensis_contig11.2045.1|Name=mRNA_S-ischiensis_contig11.2045.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=185bp
MDGARAMQTTWRMHRARARFVAVRRKVVKVQSIARCLLAKRELDQLRDED
YDRTIKHLKHGVTLTKHTVGSNLKMTKVKGLVFTLDPQGGVLSWNGLGVR
GKEGLNIFRDIKDLTKGISSKTLMKTGEPAKGEGETPEERRERAGGVYLV
LHEVSGGRTVDLEAVDYAQRDSLFRTISRLRAGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS