prot_S-ischiensis_contig11.2040.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2040.1
Unique Nameprot_S-ischiensis_contig11.2040.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length320
Homology
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BLAST of mRNA_S-ischiensis_contig11.2040.1 vs. uniprot
Match: D8LT64_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT64_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.200e-19
Identity = 46/72 (63.89%), Postives = 58/72 (80.56%), Query Frame = 0 
Query:  183 VGGISTVAYLPLPNNGDYRHVPAEVLMSALVLVARVTVAAADYLGVSLPHPIYPASSTTYATVAVDQSQRKR 254
            V G+ST+  LPLPNNGDY  VPA+VLM++L LVAR+  A A  LGVSLPHP++PA+ST YAT++VD S R+R
Sbjct:  225 VSGVSTLVDLPLPNNGDYSQVPADVLMASLALVARLVAAVASCLGVSLPHPLFPAASTRYATISVDSSPRER 296
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT64_ECTSI2.200e-1963.89Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15157FAMILY NOT NAMEDcoord: 34..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:612904..615699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2040.1mRNA_S-ischiensis_contig11.2040.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 610977..615751 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2040.1 ID=prot_S-ischiensis_contig11.2040.1|Name=mRNA_S-ischiensis_contig11.2040.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=320bp
MKENKRWSCPICGTKVGDAVCGSCVSVEAGRRRKELQERQGVLREIRARA
LSTSQCHKDALHQEAALEREAANASRLKEEILGVTELVRRDRINLASSSF
TLQQRQALQAEVEAKLAAEGRAAKHVFEAVLWGLKRHMEEVRRALRRRCW
EKVSQLFVVLPIHASVPGWSEGGERGGGPRGEVGGISTVAYLPLPNNGDY
RHVPAEVLMSALVLVARVTVAAADYLGVSLPHPIYPASSTTYATVAVDQS
QRKRWRRRACSGGWSPCATPWGLSTRPWTCWAGAVIHIHCNEVRVQSHVC
EIDCSRITLLAGKYSKSAS*
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