prot_S-ischiensis_contig11.2034.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2034.1
Unique Nameprot_S-ischiensis_contig11.2034.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length125
Homology
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BLAST of mRNA_S-ischiensis_contig11.2034.1 vs. uniprot
Match: A0A6H5KJI2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJI2_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.190e-11
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 0 
Query:   37 SCRVLGRLCWSLASTAPRARRILRDAVGPALPHSVSILTPLV--AGAGSSSEVSAAAQALLALVRAVIASIGQEVGPAFSSRSVEALVAA 124
            SCRVL RLC +  ST  +ARR+L  AV PAL   V+++ PL+  A AG S E  +AAQ LL L  +V+  +G+E GP F+S +V +L AA
Sbjct:  230 SCRVLSRLCRTFVSTPAKARRVLFQAVSPALSPIVTLVPPLLEQALAGGSKEAGSAAQGLLRLQVSVVECLGKEAGPTFASSAVGSLSAA 319
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2034.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJI2_9PHAE1.190e-1148.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:576880..579384 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2034.1mRNA_S-ischiensis_contig11.2034.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 576880..579384 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2034.1 ID=prot_S-ischiensis_contig11.2034.1|Name=mRNA_S-ischiensis_contig11.2034.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=125bp
MYTALLQPLLQDLWRVAAALEAGQQVSAEDLEGVRSSCRVLGRLCWSLAS
TAPRARRILRDAVGPALPHSVSILTPLVAGAGSSSEVSAAAQALLALVRA
VIASIGQEVGPAFSSRSVEALVAAW
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