prot_S-ischiensis_contig11.2030.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2030.1
Unique Nameprot_S-ischiensis_contig11.2030.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length182
Homology
BLAST of mRNA_S-ischiensis_contig11.2030.1 vs. uniprot
Match: A0A6H5KGL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL8_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.320e-44
Identity = 87/169 (51.48%), Postives = 117/169 (69.23%), Query Frame = 0
Query:   12 YRGVLFRITAMDDTENSLVDSDMEHCYRRLREDVDRCLEPLREMQRGRFLRRRFTWGTFGLTGPQFFGLGYNVVRSAIELLPDAIGAAVAAAPGHTGRPDGRYRFVLHMPSPEAVLGWQRRRATEKALVKANPSGCARAEGW-QASLASKAGRITRSLVRATEDIGVGD 179
            +RGV+FR+T MD    +++DS ++  YRR+   VD CL+PLR+M    F RRR    +FGL GPQFFG+GY+ VRSA+E  PDA+ AAV         P+ +YRFV+++PS E V+ WQRR+A EKA VK NP+GCARAE   ++S  ++ GRITR+LVRA E +G  D
Sbjct:  252 FRGVVFRVTMMDHPGTAMIDSSLDRLYRRVVAAVDECLQPLRKMDPC-FRRRRTGHASFGLNGPQFFGIGYDAVRSAMEAWPDAVSAAVTPEDD----PERQYRFVINLPSEETVVAWQRRQAAEKAGVKENPNGCARAEVLSESSSTARTGRITRTLVRAAEKLGAAD 415          
BLAST of mRNA_S-ischiensis_contig11.2030.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 2.400e-44
Identity = 88/169 (52.07%), Postives = 117/169 (69.23%), Query Frame = 0
Query:   12 YRGVLFRITAMDDTENSLVDSDMEHCYRRLREDVDRCLEPLREMQRGRFLRRRFTWGTFGLTGPQFFGLGYNVVRSAIELLPDAIGAAVAAAPGHTGRPDGRYRFVLHMPSPEAVLGWQRRRATEKALVKANPSGCARAEGW-QASLASKAGRITRSLVRATEDIGVGD 179
            YRGV+FR+T MDD   +++DS ++  Y R+   VD CL+PLR+M    F RRR    +FGL GPQFFG+GY+ VRSA+E  PDA+ AAV         P+ +YRFV+++PS E V+ WQRR+A EKA VK NP+GCARAE   ++S  ++ GRITR+LVRA E +G  D
Sbjct: 2816 YRGVVFRVTMMDDPGTAMIDSSLDRLYTRVVAAVDECLQPLRKMDPC-FRRRRTGHASFGLNGPQFFGIGYDAVRSAMEAWPDAVSAAVTPEDD----PERQYRFVMNLPSEETVVAWQRRQAAEKAGVKENPNGCARAEVLSESSSTARTGRITRTLVRAAEKLGAAD 2979          
BLAST of mRNA_S-ischiensis_contig11.2030.1 vs. uniprot
Match: A0A7S1DDE7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDE7_CYCTE)

HSP 1 Score: 77.4 bits (189), Expect = 1.640e-13
Identity = 62/168 (36.90%), Postives = 81/168 (48.21%), Query Frame = 0
Query:   15 VLFRITAMDDTENSLVDSDMEHCYRRLREDVDRCLEPLREMQRGRF-----LRRRFTWGTFGLTGPQFFGLGYNVVRSAIELLPDAIGAAVAAAPGHTGRPDGRYRFVLHMPSPEAVLGWQRRRAT---EKALVKANPSGCARAEGWQASLASK-AGRITRSLVRATE 173
            +LF  TA D+  + +    +   Y  +   V R         +G       +RR+ +  TFGL GPQFFG+G   +R  +E L    G     AP     P   YRF    PS E V+G QR+RA    E AL   N SGCAR EG  A   S  +GRITR+LVR+ +
Sbjct:   18 ILFTATAADNPAHPITGRTVNEVYNTVVSRVHRINSEF--YSKGNVYSKLPVRRKSSKKTFGLNGPQFFGIGLTHIRKRLEALE---GVEAVVAPLTESSPS--YRFCFKQPSIETVMGLQRKRAAAAAENALE--NASGCARTEGMTAFTRSGGSGRITRALVRSAD 176          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2030.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KGL8_9PHAE1.320e-4451.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU3_ECTSI2.400e-4452.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1DDE7_CYCTE1.640e-1336.90Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003889FY-rich, C-terminalPFAMPF05965FYRCcoord: 16..95
e-value: 1.5E-6
score: 28.3
IPR003889FY-rich, C-terminalPROSITEPS51543FYRCcoord: 12..106
score: 12.537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:559129..561857 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2030.1mRNA_S-ischiensis_contig11.2030.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 559129..561859 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2030.1 ID=prot_S-ischiensis_contig11.2030.1|Name=mRNA_S-ischiensis_contig11.2030.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=182bp
EAAAATAPPERYRGVLFRITAMDDTENSLVDSDMEHCYRRLREDVDRCLE
PLREMQRGRFLRRRFTWGTFGLTGPQFFGLGYNVVRSAIELLPDAIGAAV
AAAPGHTGRPDGRYRFVLHMPSPEAVLGWQRRRATEKALVKANPSGCARA
EGWQASLASKAGRITRSLVRATEDIGVGDMAA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003889FYrich_C