prot_S-ischiensis_contig11.2022.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.2022.1
Unique Nameprot_S-ischiensis_contig11.2022.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length183
Homology
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BLAST of mRNA_S-ischiensis_contig11.2022.1 vs. uniprot
Match: A0A6H5KG36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG36_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 7.970e-11
Identity = 36/75 (48.00%), Postives = 51/75 (68.00%), Query Frame = 0 
Query:   18 SGDARRVGPQSGELAGQAW--VGKRMRLYRDDVDYPKGRWCLAWVRRYSSTQRKHLLAYEDAEN--LRPGWLAVK 88
            SG  RRV    G+   + +  VGK ++L+RDDVDYP GRWC+A V+++S TQ+KHLL+Y    +  L PGWL ++
Sbjct:  723 SGSRRRVSEAGGKQPKEGFGLVGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLE 797
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BLAST of mRNA_S-ischiensis_contig11.2022.1 vs. uniprot
Match: D8LHU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU3_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.000e-10
Identity = 32/65 (49.23%), Postives = 47/65 (72.31%), Query Frame = 0 
Query:   37 VGKRMRLYRDDVDYPKGRWCLAWVRRYSSTQRKHLLAYEDAEN--LRPGWLAVKPDHRPDVRNTP 99
            VGK ++L+RDDVDYP GRWC+A V+++S TQ+KHLL+Y    +  L PGWL ++   + +V + P
Sbjct:  591 VGKTIKLHRDDVDYPNGRWCVADVQQWSRTQQKHLLSYRGVGSAWLPPGWLKLEEKRKAEVVSVP 655
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.2022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KG36_9PHAE7.970e-1148.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHU3_ECTSI2.000e-1049.23Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:530329..531500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.2022.1mRNA_S-ischiensis_contig11.2022.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 530315..531500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.2022.1 ID=prot_S-ischiensis_contig11.2022.1|Name=mRNA_S-ischiensis_contig11.2022.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=183bp
MPAPPSPKHEGRPSRKRSGDARRVGPQSGELAGQAWVGKRMRLYRDDVDY
PKGRWCLAWVRRYSSTQRKHLLAYEDAENLRPGWLAVKPDHRPDVRNTPP
PLPPPGPAAHASQGTPGPPGGPERAPTPPRQADERPKPEPKEEPGPGPPG
AEGPEEGAAAAAPAGRRQSSSAVVGAAADGSDG
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