prot_S-ischiensis_contig11.1976.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig11.1976.1
Unique Nameprot_S-ischiensis_contig11.1976.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length316
Homology
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BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: A0A0S7F4E4_9TELE (DCTN1 (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7F4E4_9TELE)

HSP 1 Score: 89.7 bits (221), Expect = 7.810e-19
Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 0 
Query:   34 LGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNP 111
            +G +V    +G+ GTV + G T F SG WVGI LDEP G++DG+  G +YFTCE NHGIF R + ++ +D+G+ AT+P
Sbjct:    1 IGSKVEVTGKGQQGTVAYIGATLFASGKWVGIILDEPKGKNDGTVQGKRYFTCEENHGIFVRSSQIQVIDDGSAATSP 78
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BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: A0A7K4R6Q1_9TYRA (DCTN1 protein (Fragment) n=1 Tax=Neopipo cinnamomea TaxID=456388 RepID=A0A7K4R6Q1_9TYRA)

HSP 1 Score: 90.1 bits (222), Expect = 8.950e-19
Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:   31 PLQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNP 111
            PL++G RV    +G  GTV + G T F +G WVG+ LDEP G++DG+  G +YFTCE NHGIF R++ ++  ++GA  T+P
Sbjct:   26 PLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEPRGKNDGTVQGRKYFTCEENHGIFVRQSQIQVFEDGADTTSP 106
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BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: UPI000FD6880F (dynactin subunit 1-like n=2 Tax=Pipridae TaxID=114313 RepID=UPI000FD6880F)

HSP 1 Score: 90.1 bits (222), Expect = 2.980e-18
Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:   31 PLQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNP 111
            PL++G RV    +G  GTV + G T F +G WVG+ LDEP G++DG+  G +YFTCE NHGIF R++ ++  ++GA  T+P
Sbjct:   26 PLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEPRGKNDGTVQGRKYFTCEENHGIFVRQSQIQVFEDGADTTSP 106
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BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: UPI000462E6F1 (dynactin subunit 1 isoform X8 n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI000462E6F1)

HSP 1 Score: 95.9 bits (237), Expect = 3.570e-18
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 0 
Query:   18 ARSRGTHHDTEYEPLQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNPSETARPSTTGLDRR 125
            A SR +  +   +PL++G RV    +G  GTV + G T F +G WVG+ LDEP G++DG+  G +YFTCE NHGIF R++ ++  D+GA  T+P ET   ST+ + +R
Sbjct:   18 ASSRMSSVEASGKPLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGRRYFTCEENHGIFVRQSQIQVFDDGADTTSP-ETPESSTSKVPKR 124
[Close]
BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: A0A803TW73_ANOCA (Dynactin subunit 1 n=1 Tax=Anolis carolinensis TaxID=28377 RepID=A0A803TW73_ANOCA)

HSP 1 Score: 95.9 bits (237), Expect = 3.570e-18
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 0 
Query:   18 ARSRGTHHDTEYEPLQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNPSETARPSTTGLDRR 125
            A SR +  +   +PL++G RV    +G  GTV + G T F +G WVG+ LDEP G++DG+  G +YFTCE NHGIF R++ ++  D+GA  T+P ET   ST+ + +R
Sbjct:   18 ASSRMSSVEASGKPLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGRRYFTCEENHGIFVRQSQIQVFDDGADTTSP-ETPESSTSKVPKR 124
[Close]
BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: H9GAJ5_ANOCA (Dynactin subunit 1 n=8 Tax=Episquamata TaxID=1329912 RepID=H9GAJ5_ANOCA)

HSP 1 Score: 95.9 bits (237), Expect = 3.580e-18
Identity = 48/108 (44.44%), Postives = 70/108 (64.81%), Query Frame = 0 
Query:   18 ARSRGTHHDTEYEPLQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNPSETARPSTTGLDRR 125
            A SR +  +   +PL++G RV    +G  GTV + G T F +G WVG+ LDEP G++DG+  G +YFTCE NHGIF R++ ++  D+GA  T+P ET   ST+ + +R
Sbjct:   18 ASSRMSSVEASGKPLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEPKGKNDGTVQGRRYFTCEENHGIFVRQSQIQVFDDGADTTSP-ETPESSTSKVPKR 124
[Close]
BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: UPI000FFD0317 (dynactin subunit 1-like n=1 Tax=Empidonax traillii TaxID=164674 RepID=UPI000FFD0317)

HSP 1 Score: 90.1 bits (222), Expect = 4.090e-18
Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = 0 
Query:   31 PLQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNP 111
            PL++G RV    +G  GTV + G T F +G WVG+ LDEP G++DG+  G +YFTCE NHGIF R++ ++  ++GA  T+P
Sbjct:    9 PLKVGSRVEVIGKGHRGTVAYVGATLFATGKWVGVILDEPRGKNDGTVQGRKYFTCEENHGIFVRQSQIQVFEDGADTTSP 89
[Close]
BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: A0A6F9BIG3_9TELE (CAP-Gly domain-containing protein (Fragment) n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F9BIG3_9TELE)

HSP 1 Score: 86.7 bits (213), Expect = 1.240e-17
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0 
Query:   33 QLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNP 111
            ++G RV    +G  GTV + G T F +G WVG+ LDEP G++DG+  G +YFTC  NHGIF R++ ++ +D+GA  T+P
Sbjct:   19 KVGSRVEVIGKGHRGTVAYIGATLFSTGKWVGVILDEPKGKNDGTVQGKRYFTCHENHGIFVRQSQIQLVDDGADTTSP 97
[Close]
BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: A0A3B3WDL4_9TELE (Dynactin subunit 1 n=1 Tax=Poecilia mexicana TaxID=48701 RepID=A0A3B3WDL4_9TELE)

HSP 1 Score: 92.0 bits (227), Expect = 6.780e-17
Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0 
Query:   32 LQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNP 111
            LQ+G +V    +G+ GTV + G T F SG WVGI LDEP G++DG+  G +YF+CE NHGIF R + ++ +D+G+ AT+P
Sbjct:   10 LQIGSKVEVTGKGQQGTVAYIGATLFASGKWVGIILDEPKGKNDGTVQGKRYFSCEENHGIFVRSSQIQVIDDGSAATSP 89
[Close]
BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Match: A0A3P8S583_AMPPE (Dynactin subunit 1 n=15 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3P8S583_AMPPE)

HSP 1 Score: 92.0 bits (227), Expect = 7.090e-17
Identity = 43/89 (48.31%), Postives = 61/89 (68.54%), Query Frame = 0 
Query:   31 PLQLGCRVITQPRGRTGTVRHYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVERLDNGAGATNPSETARPST 119
            P+++G  V    +G+ GTV + G T F SG WVG+ LDEP G++DG+  G +YFTCE NHGIF R++ ++ +D+GA  T+P ET  P T
Sbjct:   28 PVKVGSLVEVIGKGQRGTVAYIGTTLFASGKWVGVILDEPKGKNDGTVQGKRYFTCEENHGIFVRQSQIQLVDDGADTTSP-ETPEPGT 115
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig11.1976.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S7F4E4_9TELE7.810e-1950.00DCTN1 (Fragment) n=1 Tax=Poeciliopsis prolifica Ta... [more]
A0A7K4R6Q1_9TYRA8.950e-1948.15DCTN1 protein (Fragment) n=1 Tax=Neopipo cinnamome... [more]
UPI000FD6880F2.980e-1848.15dynactin subunit 1-like n=2 Tax=Pipridae TaxID=114... [more]
UPI000462E6F13.570e-1844.44dynactin subunit 1 isoform X8 n=1 Tax=Anolis carol... [more]
A0A803TW73_ANOCA3.570e-1844.44Dynactin subunit 1 n=1 Tax=Anolis carolinensis Tax... [more]
H9GAJ5_ANOCA3.580e-1844.44Dynactin subunit 1 n=8 Tax=Episquamata TaxID=13299... [more]
UPI000FFD03174.090e-1848.15dynactin subunit 1-like n=1 Tax=Empidonax traillii... [more]
A0A6F9BIG3_9TELE1.240e-1746.84CAP-Gly domain-containing protein (Fragment) n=1 T... [more]
A0A3B3WDL4_9TELE6.780e-1750.00Dynactin subunit 1 n=1 Tax=Poecilia mexicana TaxID... [more]
A0A3P8S583_AMPPE7.090e-1748.31Dynactin subunit 1 n=15 Tax=Percomorphaceae TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000938CAP Gly-rich domainSMARTSM01052CAP_GLY_2coord: 34..100
e-value: 1.4E-31
score: 120.9
IPR000938CAP Gly-rich domainPFAMPF01302CAP_GLYcoord: 34..98
e-value: 3.3E-24
score: 84.7
IPR000938CAP Gly-rich domainPROSITEPS50245CAP_GLY_2coord: 53..95
score: 18.537
IPR036859CAP Gly-rich domain superfamilyGENE3D2.30.30.190coord: 21..116
e-value: 1.1E-27
score: 97.2
IPR036859CAP Gly-rich domain superfamilySUPERFAMILY74924Cap-Gly domaincoord: 24..113
NoneNo IPR availablePANTHERPTHR18916DYNACTIN 1-RELATED MICROTUBULE-BINDINGcoord: 29..237

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig11contigS-ischiensis_contig11:161719..165927 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig11.1976.1mRNA_S-ischiensis_contig11.1976.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig11 161688..165927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig11.1976.1 ID=prot_S-ischiensis_contig11.1976.1|Name=mRNA_S-ischiensis_contig11.1976.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=316bp
MFGKPSTLPGPGAPRAVARSRGTHHDTEYEPLQLGCRVITQPRGRTGTVR
HYGPTEFQSGLWVGIELDEPTGRHDGSHDGIQYFTCEANHGIFCRRNAVE
RLDNGAGATNPSETARPSTTGLDRRRTRTPAGTPGRGGAKGRASVGGHGR
GLSPHRVPSAGSLVSEGSGGAAKGSIMTRIDQALHDGEGVDQPVGLKARG
KRGSVASSAASSGRDLNYEVRVSQSLAEYLGSPAFQAQLGGMVDKRVNAE
LKARLAEDRPADAAATNGGTDASTAKHNTAAVAPEPLASLSKWGGGGGGG
GSASQRLESGAGGGAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000938CAP-Gly_domain
IPR036859CAP-Gly_dom_sf