prot_S-ischiensis_contig108.1926.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig108.1926.1
Unique Nameprot_S-ischiensis_contig108.1926.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length207
Homology
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: A0A7S2SQY1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY1_9STRA)

HSP 1 Score: 113 bits (282), Expect = 2.340e-25
Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 0
Query:    2 DVTRHLPECFCDLTRNFLLDLLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            D+ +HLPE FCDL RNF +DLLP G  C  + + + G PFMGPNLYITPPG+ T  HQDG+GTVDSGHQCL+G
Sbjct:  641 DLPKHLPELFCDLERNFKVDLLPRGRRCLFRHLPLRGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHQCLRG 713          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 6.030e-25
Identity = 50/74 (67.57%), Postives = 59/74 (79.73%), Query Frame = 0
Query:    1 MDVTRHLPECFCDLTRNFLLDLLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            MD+TR+LPEC  +L+R F +D+LP G  CA+Q +  E R FMGPNLYITPPGS T+ HQDGNGTVDSGHQCL G
Sbjct:  266 MDLTRYLPECANNLSREFKMDILPAGARCAMQHMPRESRTFMGPNLYITPPGSWTQCHQDGNGTVDSGHQCLAG 339          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: A0A7S2DKI0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DKI0_9STRA)

HSP 1 Score: 105 bits (261), Expect = 9.980e-24
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    2 DVTRHLPECFCDLTRNFLLDLLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            DV ++LPE   DLTR+  LDLLP GE C L+ + + G PFMGPNLYITPPG+ T  HQDG+GTVDSGH CL+G
Sbjct:   52 DVPKYLPELQADLTRHLKLDLLPRGERCMLRHLPLNGHPFMGPNLYITPPGTFTHFHQDGHGTVDSGHLCLRG 124          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: A0A7S2VFF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2VFF2_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 4.170e-21
Identity = 44/69 (63.77%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    7 LPECFCDLTRNFLLD-LLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            LP+ F DL  NF L  +LPGG +C +  V++ GRPFMGPNLYITPP S T  HQDG+GTVDSGH CL G
Sbjct:    1 LPKSFEDLQNNFKLSSILPGGSHCMMNAVNINGRPFMGPNLYITPPSSFTHFHQDGHGTVDSGHLCLSG 69          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: K0SGJ8_THAOC (C2H2-type domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SGJ8_THAOC)

HSP 1 Score: 100 bits (250), Expect = 4.740e-21
Identity = 45/75 (60.00%), Postives = 56/75 (74.67%), Query Frame = 0
Query:    1 MDVTRHLPECFCDLTRNFLL-DLLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            +D+ + LP+ F DL  NF+L  +LPGG +C +  ++V GRPFMGPNLYITPP S T  HQDG+GTVDSGH CL G
Sbjct:  860 VDMVKLLPQSFDDLKNNFMLPSILPGGSHCMMNALNVNGRPFMGPNLYITPPASFTHFHQDGHGTVDSGHLCLSG 934          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: A0A7S3ZG35_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZG35_9EUKA)

HSP 1 Score: 98.2 bits (243), Expect = 1.590e-20
Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    6 HLPECFCDLTRNFLLDLLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            + PE   D+ +    DLLPGGENC L+ VS  GRP MGPNLYI+PPG+ T  H+DG+GTVDSGH CLQG
Sbjct:  131 YTPELMVDMRKRMPFDLLPGGENCLLRYVSTNGRPQMGPNLYISPPGTYTWFHEDGHGTVDSGHLCLQG 199          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: A0A7S1CQ01_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ01_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.390e-20
Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    1 MDVTRHLPECFCDLTRNFLLDLLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            + V   LP    DL  N+ ++ LP G NC LQ +  +GRPFMGPNLY+TPPGS T  H+DG GT+DSGHQ + G
Sbjct:   30 LSVPAKLPNLAADLAANYGIETLPAGSNCMLQALPEKGRPFMGPNLYVTPPGSFTWTHEDGRGTLDSGHQTITG 103          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: A0A7S3Q867_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q867_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.320e-19
Identity = 45/75 (60.00%), Postives = 53/75 (70.67%), Query Frame = 0
Query:    1 MDVTRHLPECFCDLTRNFLLD-LLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            MD+ R LPE   D  +NF L   LPGG+ C +  V+  GRPFMGPNLY+TPPGS T  HQDG+GTVDSGH C+ G
Sbjct:  504 MDLKRTLPESHNDFLKNFRLPKCLPGGDFCMMNSVNDLGRPFMGPNLYVTPPGSFTHFHQDGHGTVDSGHMCIDG 578          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: B8CCF4_THAPS (RanBP2-type domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCF4_THAPS)

HSP 1 Score: 94.4 bits (233), Expect = 8.210e-19
Identity = 42/75 (56.00%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 MDVTRHLPECFCDLTRNFLLD-LLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            +D+ + LP+ + D  RNF L  +LPGG +C +  V+  GRPFMGPNLY+TPP S T  HQDG+GTVDSGH C +G
Sbjct:  593 VDMIKLLPQTYEDFRRNFKLPGILPGGSHCMMNAVNEGGRPFMGPNLYVTPPSSFTHFHQDGHGTVDSGHHCREG 667          
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Match: A0A7S1ZIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 9.930e-18
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 0
Query:    2 DVTRHLPECFCDLTRNFLLD-LLPGGENCALQMVSVEGRPFMGPNLYITPPGSVTKMHQDGNGTVDSGHQCLQG 74
            D+ + LP  + D    F +   LPGG +C +  V+  GRPFMGPN+Y+TPPGS T  HQDG+GTVDSGHQCL G
Sbjct:  695 DMVKLLPPLYEDFINKFKMPGCLPGGIHCMMNSVNAGGRPFMGPNIYLTPPGSFTHFHQDGHGTVDSGHQCLSG 768          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig108.1926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A7S2SQY1_9STRA2.340e-2565.75Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D8LCL4_ECTSI6.030e-2567.57ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2DKI0_9STRA9.980e-2464.38Hypothetical protein (Fragment) n=2 Tax=Dictyocha ... [more]
A0A7S2VFF2_9STRA4.170e-2163.77Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
K0SGJ8_THAOC4.740e-2160.00C2H2-type domain-containing protein n=1 Tax=Thalas... [more]
A0A7S3ZG35_9EUKA1.590e-2062.32Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
A0A7S1CQ01_9STRA3.390e-2054.05Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3Q867_9STRA1.320e-1960.00Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
B8CCF4_THAPS8.210e-1956.00RanBP2-type domain-containing protein (Fragment) n... [more]
A0A7S1ZIK7_9STRA9.930e-1855.41Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig108contigS-ischiensis_contig108:171366..174751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig108.1926.1mRNA_S-ischiensis_contig108.1926.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig108 171289..174855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig108.1926.1 ID=prot_S-ischiensis_contig108.1926.1|Name=mRNA_S-ischiensis_contig108.1926.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=207bp
MDVTRHLPECFCDLTRNFLLDLLPGGENCALQMVSVEGRPFMGPNLYITP
PGSVTKMHQDGNGTVDSGHQCLQGPQPRYHAEAPGRGEQAPRHRHSQCCC
QEEHATGTLATAAAAAAAANPPRPRPNSGGATSTAPRVPSAAAATAATRR
TTVIVIRGRRCLHLRRRRRPHYHPCCRHLGWWCGRSGWGCPCRGCGRARQ
LRWGPQ*
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