prot_S-ischiensis_contig106.1887.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig106.1887.1
Unique Nameprot_S-ischiensis_contig106.1887.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length140
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig106.1887.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..107
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..139
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.899
NoneNo IPR availableTMHMMTMhelixcoord: 59..81
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 109..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig106contigS-ischiensis_contig106:239581..240180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig106.1887.1mRNA_S-ischiensis_contig106.1887.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig106 239542..240191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig106.1887.1 ID=prot_S-ischiensis_contig106.1887.1|Name=mRNA_S-ischiensis_contig106.1887.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=140bp
MLPVFRALVAALALLAAPVLGLRPVIPARSVAGRSASLGSASPWGLTMAS
KPDTDVTKFGLAALAASAPLASPGAAWATVAGPAATAVAAATPLALADAA
SGPEGPPWLVAVPIVLGVVLATSVAGVIFGLSQPREQDD*
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