prot_S-ischiensis_contig106.1878.1 (polypeptide) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: D8LFT3_ECTSI (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFT3_ECTSI) HSP 1 Score: 135 bits (339), Expect = 2.380e-34 Identity = 78/135 (57.78%), Postives = 92/135 (68.15%), Query Frame = 0
Query: 86 SVKEHQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGDIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALSEFAGSTPAGSLSSVQLARLVHRLDHP 220
+++EHQ+ HA VESL V E +V++ AR +T A A L PL AK LLE GRKAE A + V DIV YAQR+SG +SAPAYW+PGM M+GFAPPAP EMMRAGALS FA S SLS +L L LD P
Sbjct: 62 ALREHQQLHAEVESLRQEVRYGEQQVQDCARKLTEADAALRGPLRDAKRLLEAGRKAEAAEIDVRDIVDYAQRISGITSAPAYWKPGMAMVGFAPPAPRPEMMRAGALSAFAVSPGTSSLSLPELLTLARDLDRP 196
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: A0A835YUZ4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ4_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.380e-18 Identity = 50/87 (57.47%), Postives = 59/87 (67.82%), Query Frame = 0
Query: 118 MTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGDIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALSEFAGSTPAGS 204
+ A+A L L A+ L KA AGV V DIVAYAQR+SGT+SAPAYW+PGMPM+GF PPAP+ EMMR GAL+ T A S
Sbjct: 63 IAGASADLRHALESARKSLGEFDKACAAGVAVSDIVAYAQRISGTTSAPAYWKPGMPMVGFLPPAPLPEMMRMGALTRLNAGTAATS 149
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: A0A7S3UVI8_HETAK (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVI8_HETAK) HSP 1 Score: 78.2 bits (191), Expect = 1.350e-13 Identity = 40/89 (44.94%), Postives = 58/89 (65.17%), Query Frame = 0
Query: 109 ARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGDIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALSEFA 197
AR R+ A +++S L L K K +++ R A V + +VAYAQR+ GT++AP YW+PGMPM+GF PPAP+ E +RAG+ +A
Sbjct: 75 ARARDLASALSSKEKDLRIALRKVKPVVDAARLANANPVSLKGLVAYAQRIGGTTAAPPYWKPGMPMVGFIPPAPLPEQIRAGSFHAYA 163
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: A0A8K1CAS9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAS9_PYTOL) HSP 1 Score: 73.2 bits (178), Expect = 2.180e-11 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 0
Query: 89 EHQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGDIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALS 194
+HQ + ++ + + + +V +A + + + L K + +L+ R+ +K + D+VAYA R++GT+SAP WRPG PM GF PPAP +MMRAG LS
Sbjct: 67 QHQVAQKELLAVQDEIHEKKQKVVRYAAQLRQSQEDIALVLKKHRRVLDHARQKQKVLLDPRDVVAYAHRIAGTTSAPKEWRPGFPMFGFMPPAPQEQMMRAGVLS 172
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: F0WL35_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WL35_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.610e-11 Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 0
Query: 90 HQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGD--IVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALS 194
H+ + L + E RV E+A + +A ++ K + L++ RK ++ V + +VAYA R++GT+SAP +W+PG+PM GFAPPAP ++MRAG LS
Sbjct: 68 HRLTQKTIFQLQNEIQAKEERVIEYATQLRNAQVAIQNVFEKHQYTLQQARKPKQEQVLLDPRVVVAYAHRIAGTTSAPEHWQPGLPMSGFAPPAPQEQIMRAGVLS 174
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: A0A024TZF4_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZF4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 3.740e-11 Identity = 38/110 (34.55%), Postives = 66/110 (60.00%), Query Frame = 0
Query: 87 VKEHQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVG--DIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALS 194
+ +HQ +++L +++D E ++ +A+ + S + L+K + LE+ + + V + ++VAYA +++G++SAP W+P PM GF PPAP EMMRAG LS
Sbjct: 64 LNQHQSAQKELDALKAQIADKEQKIVRYAKELRSGQQSIASALAKHRRTLEQCHQDSSSKVVLDPLEVVAYAHKIAGSTSAPPNWKPEYPMFGFVPPAPTPEMMRAGVLS 173
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: W4FJC9_9STRA (Mediator of RNA polymerase II transcription subunit 4 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FJC9_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 4.400e-11 Identity = 45/126 (35.71%), Postives = 72/126 (57.14%), Query Frame = 0
Query: 87 VKEHQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRK--AEKAGVRVGDIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALSEFAGSTPAGSLSSVQL 210
+ +HQ +++L +++D E ++ +A+ + S + L+K + L + + A K + DIVAYA +++G++SAP W+P PM GF PPAP EMMRAG LS GST + +V L
Sbjct: 63 LNQHQTAQKELDALKAQIADKEQKIVRYAKELRSGQQSIASVLAKHRRTLTQCAQDAASKVVLDPLDIVAYAHKIAGSTSAPPNWQPEYPMFGFVPPAPTPEMMRAGVLSR--GSTSRATYFAVVL 186
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: A0A024GRI1_9STRA (J domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GRI1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 7.220e-11 Identity = 42/107 (39.25%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 90 HQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGD--IVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALS 194
HQ + L + E RV E+A + +A ++ K + +L++ RK ++ V + +VAYA R++GT+SAP +W+PG+PM GFAPPAP ++MRAG LS
Sbjct: 754 HQITQKTLFQLQNEIKAKEERVIEYATQLRNAQVAIQNVFEKHQYVLQQVRKPKQQQVFLDPQLLVAYAHRIAGTTSAPKHWQPGLPMSGFAPPAPQEQIMRAGVLS 860
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: A0A484E4Y5_BRELC (Mediator of RNA polymerase II transcription subunit 4 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E4Y5_BRELC) HSP 1 Score: 71.2 bits (173), Expect = 9.950e-11 Identity = 40/108 (37.04%), Postives = 61/108 (56.48%), Query Frame = 0
Query: 87 VKEHQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGDIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALS 194
V HQ + L +S + + ++A + S+ +E L + K +L+ ++ K + ++VAYA R++GT+SAP W+PG PM GF PPAP MMRAG LS
Sbjct: 68 VARHQVAQNELLRLENDISRKKQTIIDYAAQLRSSQDAIENVLRRHKVVLQHAKQVNKKVLDPREVVAYAHRIAGTTSAPKEWQPGFPMFGFMPPAPQEHMMRAGVLS 175
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Match: D0NRG4_PHYIT (Mediator of RNA polymerase II transcription subunit 4 n=24 Tax=Phytophthora TaxID=4783 RepID=D0NRG4_PHYIT) HSP 1 Score: 70.5 bits (171), Expect = 1.830e-10 Identity = 38/105 (36.19%), Postives = 59/105 (56.19%), Query Frame = 0
Query: 90 HQECHAAVESLSCRVSDAEARVREFARSMTSAAAGLEEPLSKAKDLLERGRKAEKAGVRVGDIVAYAQRVSGTSSAPAYWRPGMPMIGFAPPAPMTEMMRAGALS 194
HQ + + + + + +V ++A + + + + L K + L+ ++ K + DIVAYA R++GT+SAP W+PG PM GF PPAP MMRAG LS
Sbjct: 69 HQVAQKELLRIEAEIENKKQKVVQYAAQLRCSQEDIADVLRKHRVTLQNAKQKSKVVLDPRDIVAYAHRIAGTTSAPKEWQPGFPMFGFMPPAPQEHMMRAGVLS 173 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig106.1878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig106.1878.1 ID=prot_S-ischiensis_contig106.1878.1|Name=mRNA_S-ischiensis_contig106.1878.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=246bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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