prot_S-ischiensis_contig103.1780.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig103.1780.1
Unique Nameprot_S-ischiensis_contig103.1780.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length314
Homology
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: A0A835YK59_9STRA (Putative DNAdirected RNA polymerase II 36 kDa polypeptide A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK59_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 1.900e-139
Identity = 200/308 (64.94%), Postives = 241/308 (78.25%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQFEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQLV 308
            MPN+R P++EVLELK DFVKFVLSDTD SVANALRRVMI EVPTMAIDLVTI +NSS LQDEFLAHRLGL+PLR + G +F YNLDCDCED+C +CSVT +L  SWE KA  RP+HE+DLPV VTS+DL + DPR+ PVHFA SD    SQD GI++AKLSRGQ++QLTAVAKKGI KEHAKWSPV VATY +DPI+ V  +V A LT  Q+ ++VE CP KVY   E+T  +  +NR  CM+CD+C  +A S + RPEDD+VVTV   +DRF FSVETNG++ A+ VV  AL+ +  KL  LRN+L+
Sbjct:    1 MPNTRAPKIEVLELKADFVKFVLSDTDTSVANALRRVMIAEVPTMAIDLVTITENSSALQDEFLAHRLGLVPLRCEPGTKFVYNLDCDCEDNCEQCSVTLSLDVSWESKAAGRPDHEKDLPVFVTSSDLVSHDPRVGPVHFASSDIIDASQDDGIMLAKLSRGQRLQLTAVAKKGIAKEHAKWSPVCVATYQFDPIIKVADDVSATLTVAQRQQVVESCPVKVYGLDERTNNIVVRNRLECMYCDECTNVASSLKLRPEDDAVVTVTASQDRFIFSVETNGTIDADQVVQQALEALSLKLQTLRNELI 308          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: D7FHB9_ECTSI (RPOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB9_ECTSI)

HSP 1 Score: 359 bits (921), Expect = 6.600e-122
Identity = 175/259 (67.57%), Postives = 212/259 (81.85%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQFEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQT--FSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRAR 257
            MPN R PQVE+++L+EDFV+FVLS+TD SVANALRRVMI EVPTMAIDLVTIHDNSSVLQDEFL+HRLGLIPL AD GVQ+EYN DCDCED+C KCS  FTL  SW++KA  RPEH +D PV VTS DL ++DPRL  VHFAPSD+     SQD GI+IAKL++GQ++QLTAVAKKGI KEHAKWSPVAVATY ++P++++N E EA LTPEQK E VE+CP KVY R EK+GT++ ++R +CM+     YL + + +R
Sbjct:    1 MPNLRAPQVEIVDLREDFVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADPGVQYEYNYDCDCEDYCDKCSAVFTLDVSWDKKALGRPEHMQDQPVHVTSADLVSSDPRLRAVHFAPSDQTNSDISQDAGIIIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPVIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKSGTIFVEHRDMCMWRRTGRYLRRRWWSR 259          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: A0A8K1CE06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE06_PYTOL)

HSP 1 Score: 320 bits (821), Expect = 6.980e-106
Identity = 160/311 (51.45%), Postives = 221/311 (71.06%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQ-----FEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQ 306
            MPN R P++EV+EL++DF+KF LS+TD SVANA+RRVMI EVPT+AIDLVTI  N+SV+ DEFLAHRLG+IPL  D G++     F Y+ DCDC++HCP CSV FTL    ++             + VTS  L +TDP + P+HF+  +  + +QDTG++IAKL  GQ+I+L+A+AK GIGKEHAKWSPVAVAT++Y+PI+ +N  V   L+ +QK E+ + CP +VY   E    L   +   CM+CD+CV +A SF+  PEDD+ +T+R RED+F FSVET G +  E+VV+ AL ++++KL  L++Q
Sbjct:    1 MPNPRFPKIEVVELRDDFIKFELSETDASVANAIRRVMIAEVPTLAIDLVTIEANTSVMTDEFLAHRLGMIPLFFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFTLDVVADQGV-----------LTVTSESLRSTDPYIRPMHFSSEEEFSNTQDTGVIIAKLGPGQRIKLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVMNTLSSDQKAELYKSCPAEVYDTDENYDQLTVGDAMRCMYCDECVKVANSFKDNPEDDAALTIRMREDKFIFSVETCGQLRPEEVVICALDIIREKLSSLKHQ 300          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: A0A7S2Y381_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y381_9STRA)

HSP 1 Score: 320 bits (821), Expect = 1.310e-105
Identity = 161/299 (53.85%), Postives = 215/299 (71.91%), Query Frame = 0
Query:    4 SRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRG--VQFEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKL 300
            +R P+V+V EL++D ++F LSDTDISVANALRRVMI E PT+AIDLVTI  N+SV+QDEFLAHRLGLIP+R  RG   +F +N DCDCED+C +C+V F+L  S++++A  RP+HE DLP+ VTS DL + +P +  VHFA +D Q  SQD GI + KL+RGQ I+LTA+AK G  KEH+KW    VATY YDPI+ +N E   +L+ EQ D++ E CP  V+   EKTG L   NR  CM+C++C  L  + +AR EDD  + +    + F F+VETNG++ AE+VV++AL V+  KL
Sbjct:    5 TRFPKVKVQELRDDCIRFELSDTDISVANALRRVMIAETPTLAIDLVTIETNTSVMQDEFLAHRLGLIPIRYHRGDVSKFRFNYDCDCEDYCHQCAVLFSLDVSFDQRAAMRPDHESDLPLTVTSQDLVSNNPDVQAVHFASADEQQQSQDAGIALLKLARGQAIKLTAIAKLGTQKEHSKWCTCCVATYQYDPIIKLNEEKLDQLSSEQVDQLAESCPVGVFEVDEKTGKLTVVNRMDCMYCEECTRLGDTMKARSEDDPFIDIHADTNVFLFTVETNGALLAEEVVLSALTVLGAKL 303          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: K3W7V5_GLOUD (RPOLD domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3W7V5_GLOUD)

HSP 1 Score: 317 bits (811), Expect = 2.360e-104
Identity = 159/311 (51.13%), Postives = 218/311 (70.10%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQ-----FEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQ 306
            MPN R P++E+ EL++DF+KF LS+TD SVANA+RRVMI EVPT+AIDLV+I  N+SV+ DEFLAHRLG+IPL  D G++     F Y+ DCDC++HCP CSV F L    ++             + VTS  L + DP + PV+F+  +    +QDTG++IAKL  GQ+++L+A+AK GIGKEHAKWSPVAVAT++Y+PI+ +N  V A  TPEQK E+ + CPT+VY   E        +   CM+CD+CV +A SF+  PEDD+ V+VR RED+F FSVET G +  E+VV+ AL ++++KL  L++Q
Sbjct:    1 MPNPRFPKIEIQELRDDFIKFELSETDASVANAIRRVMISEVPTLAIDLVSIEVNTSVMTDEFLAHRLGMIPLYFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFQLDVRADQGV-----------MTVTSEALKSLDPYIRPVNFSSEEELNNTQDTGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVLATYTPEQKAELYKSCPTEVYETDENYDQFTVGDSMRCMYCDECVKVADSFKDNPEDDAAVSVRMREDKFIFSVETTGQLRPEEVVICALDLIREKLSSLKHQ 300          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: W4FWZ6_9STRA (RPOLD domain-containing protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FWZ6_9STRA)

HSP 1 Score: 316 bits (809), Expect = 4.910e-104
Identity = 156/311 (50.16%), Postives = 216/311 (69.45%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQ-----FEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQ 306
            MPN+R P++++ E+++DF+KF LS+TD SVANA+RRVMI EVPT+AIDLV+I  N+SV+ DEFLAHRLG+IPLR + G++     F Y+ DCDC++HCP CSV F L    E   +            VTS  L + DP + PVHF+  +    +QDTG++IAKL  GQ+++L A+AK GIGKEHAKWSPVAVATY+++PI+ +N  V    T EQ+ E+ + CPT+V+   +   TL  ++   CM+CD+CV LA S+R  PEDD  VTV   +D+F FSVET G +  E+VV+ AL +++DKL  L++Q
Sbjct:    1 MPNTRFPKIDLQEIRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVSIEVNTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSADCDCDEHCPNCSVEFELDVRAESGTQ-----------TVTSDSLRSLDPYIKPVHFSSEEEANNTQDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLNTYTSEQRVELYKSCPTRVFEIDDTYDTLQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVTATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQ 300          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: A0A024G378_9STRA (RPOLD domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G378_9STRA)

HSP 1 Score: 314 bits (804), Expect = 2.630e-103
Identity = 159/311 (51.13%), Postives = 216/311 (69.45%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQ-----FEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQ 306
            MPN + P+VE+L+L++DF+KF L +TD SVANALRRVMI EVPT+AIDLVTI  N+SV+ DEFLAHRLG+IPL  D G++     F Y+ DCDCE+HCP CSV F L    E+             + VTS  L + DP + PV+F+  +    +QDTG++IAKL  GQ I+L+A+AK GIGKEHAKWSPVAVAT++Y+P + +N  + +  TPEQK E+ + CPT+VY   E        N   CM+CD+CV +A S++  PEDD+ VTV+ +ED+F FSVET G +  E+VV+ AL ++++KL  L++Q
Sbjct:    1 MPNPQFPKVEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEINTSVMTDEFLAHRLGMIPLFFDGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDVRAEQGM-----------LSVTSDALKSVDPYIRPVNFSSEEEFNNTQDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWSPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVANSYKDNPEDDAAVTVQMQEDKFIFSVETTGQLKPEEVVICALDMIREKLSYLKHQ 300          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: A0A067CJB5_SAPPC (RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJB5_SAPPC)

HSP 1 Score: 305 bits (781), Expect = 8.550e-100
Identity = 151/311 (48.55%), Postives = 216/311 (69.45%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQ-----FEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQ 306
            MP+ R P++++ EL++DF+KF LS+TD SVAN++RRVMI EVPT+AIDLV+I  N+SV+ DEFLAHRLG+IPL  D G++     F Y+ DCDC++HCP CSV F L    E   +            VTS  L + DP ++PVHF+  +    +QD+G++IAKL  GQ+++L A+AK GIGKEHAKWSPVAVATY+++PI+ +N +V +  T EQ+ E+ + CPT+V+   +    +  ++   CM+CD+CV LA+S+   PEDD+ VTV    D+F FSVET G +  E+VV+ AL +++DKL  L++Q
Sbjct:    1 MPHPRFPKIDIQELRDDFIKFELSETDTSVANSIRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLAFDGGLEGFKKRFVYSADCDCDEHCPHCSVEFELDVRAESGMQ-----------TVTSQSLRSLDPYVHPVHFSSEEELNNTQDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQ 300          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: A0A484DTY5_BRELC (RPOLD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTY5_BRELC)

HSP 1 Score: 313 bits (801), Expect = 1.230e-99
Identity = 156/311 (50.16%), Postives = 221/311 (71.06%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRGVQ-----FEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQ 306
            MP+ R P++E+ EL++DF++F LS+TD SVANA+RRVMI EVPT+AIDLV+I  N+SV+ DEFLAHRLG+IPL  D G++     F Y+ DCDC+++CP CSV F+L  + +              + VTS  L ++DP + PV+F+  +    +QD+G++IAKL  GQ+++L+A+AK GIGKEHAKWSPVAVATY+YDPI+ +N  V +  TPEQK E+ + CPT+V+   E    L   +   CM+CD+CV LA SF+  PEDDS V+++ RED+F FSVET G +  E+VV+ AL ++++KL  L++Q
Sbjct:  245 MPHPRFPKIEIQELRDDFIRFELSETDPSVANAIRRVMIAEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGGLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADSGV-----------LSVTSEALKSSDPYIRPVNFSSEEELNNTQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSSYTPEQKAELYKSCPTEVFETDENYEQLTVGDPMRCMYCDECVKLADSFKDNPEDDSAVSIKMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQ 544          
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Match: A0A7S3M8K8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8K8_9STRA)

HSP 1 Score: 290 bits (742), Expect = 9.420e-94
Identity = 137/310 (44.19%), Postives = 211/310 (68.06%), Query Frame = 0
Query:    1 MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLRADRG---VQFEYNLDCDCEDHCPKCSVTFTLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFSQDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVNPEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYLAKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKLMLLRNQL 307
            MP +R P V+V+EL++D++ F L+DTDIS+ANALRR+M+ E P + IDLV   DN++VLQDEF+AHRLGLIPLRA R      + Y+ +CDC+++C KCS TFT+   + +   R P H++++ + +T+ DL +    + PVHF+ +  +  S+D GIV+ KL  GQ+++L A+AKKGIGKEHAKW+PVA     +D +V +N ++  + + EQK+ +V+ CPT+V+   E T T+  KN + C+FC +C++  + FR  PED   V V+  +++F F+VET G++ A++VV  AL  +  K+  L+  L
Sbjct:   17 MPFNRAPNVKVIELRDDYINFELTDTDISMANALRRIMMAETPILCIDLVEFEDNTTVLQDEFIAHRLGLIPLRATRDGGMAAWNYHFECDCDNYCQKCSATFTIDCDFNDIVSRLPMHQQEVAISITTRDLISLSDDVQPVHFSNTQEEDRSRDKGIVLVKLGPGQRLKLKAIAKKGIGKEHAKWNPVATVALKHDAVVTLNEDILDQYSEEQKEALVDCCPTQVFDYDENTKTVSVKNPSACIFCKECLFTTEDFRKNPEDKLAVQVKHSKEKFIFTVETTGALHAKEVVKDALAQLNAKIFRLQEIL 326          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig103.1780.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK59_9STRA1.900e-13964.94Putative DNAdirected RNA polymerase II 36 kDa poly... [more]
D7FHB9_ECTSI6.600e-12267.57RPOLD domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A8K1CE06_PYTOL6.980e-10651.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2Y381_9STRA1.310e-10553.85Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3W7V5_GLOUD2.360e-10451.13RPOLD domain-containing protein n=21 Tax=Oomycota ... [more]
W4FWZ6_9STRA4.910e-10450.16RPOLD domain-containing protein n=8 Tax=Aphanomyce... [more]
A0A024G378_9STRA2.630e-10351.13RPOLD domain-containing protein n=2 Tax=Albugo Tax... [more]
A0A067CJB5_SAPPC8.550e-10048.55RNA polymerase Rpb3/Rpb11 dimeriZation domain-cont... [more]
A0A484DTY5_BRELC1.230e-9950.16RPOLD domain-containing protein n=1 Tax=Bremia lac... [more]
A0A7S3M8K8_9STRA9.420e-9444.19Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typeSMARTSM00662rpoldneu2coord: 18..306
e-value: 1.9E-68
score: 243.4
IPR011263DNA-directed RNA polymerase, RpoA/D/Rpb3-typePFAMPF01193RNA_pol_Lcoord: 20..300
e-value: 2.4E-21
score: 75.4
IPR011262DNA-directed RNA polymerase, insert domainPFAMPF01000RNA_pol_A_baccoord: 50..184
e-value: 1.5E-30
score: 105.9
NoneNo IPR availableGENE3D3.30.1360.270coord: 8..299
e-value: 2.9E-80
score: 271.5
NoneNo IPR availablePANTHERPTHR11800DNA-DIRECTED RNA POLYMERASEcoord: 1..307
NoneNo IPR availablePANTHERPTHR11800:SF2DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB3coord: 1..307
IPR036643DNA-directed RNA polymerase, insert domain superfamilyGENE3D2.170.120.12coord: 44..181
e-value: 2.9E-80
score: 271.5
IPR036643DNA-directed RNA polymerase, insert domain superfamilySUPERFAMILY56553Insert subdomain of RNA polymerase alpha subunitcoord: 43..185
IPR001514DNA-directed RNA polymerase, 30-40kDa subunit, conserved sitePROSITEPS00446RNA_POL_D_30KDcoord: 32..72
IPR036603RNA polymerase, RBP11-like subunitSUPERFAMILY55257RBP11-like subunits of RNA polymerasecoord: 6..308

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig103contigS-ischiensis_contig103:127186..135529 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig103.1780.1mRNA_S-ischiensis_contig103.1780.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig103 125682..135577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig103.1780.1 ID=prot_S-ischiensis_contig103.1780.1|Name=mRNA_S-ischiensis_contig103.1780.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=314bp
MPNSRTPQVEVLELKEDFVKFVLSDTDISVANALRRVMIGEVPTMAIDLV
TIHDNSSVLQDEFLAHRLGLIPLRADRGVQFEYNLDCDCEDHCPKCSVTF
TLQASWEEKAKRRPEHERDLPVLVTSTDLTTTDPRLYPVHFAPSDRQTFS
QDTGIVIAKLSRGQQIQLTAVAKKGIGKEHAKWSPVAVATYVYDPIVDVN
PEVEAKLTPEQKDEMVEVCPTKVYARHEKTGTLYTKNRALCMFCDDCVYL
AKSFRARPEDDSVVTVRPREDRFTFSVETNGSVTAEDVVVTALKVVQDKL
MLLRNQLVATQPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011263DNA-dir_RNA_pol_RpoA/D/Rpb3
IPR011262DNA-dir_RNA_pol_insert
IPR036643RNApol_insert_sf
IPR001514DNA-dir_RNA_pol_30-40kDasu_CS
IPR036603RBP11-like