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Homology
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR003690 | Transcription termination factor, mitochondrial/chloroplastic | SMART | SM00733 | mt_12 | coord: 157..189
e-value: 0.68
score: 19.0
coord: 194..226
e-value: 0.0088
score: 25.3
coord: 46..78
e-value: 1.3E-4
score: 31.3
coord: 120..152
e-value: 5.3E-5
score: 32.6
coord: 342..374
e-value: 4.2E-6
score: 36.3
coord: 9..41
e-value: 160.0
score: 10.1
coord: 268..300
e-value: 0.098
score: 21.8
coord: 83..115
e-value: 1.6E-5
score: 34.3
coord: 231..263
e-value: 5.1E-5
score: 32.7
coord: 305..337
e-value: 0.28
score: 20.3 |
| IPR003690 | Transcription termination factor, mitochondrial/chloroplastic | PFAM | PF02536 | mTERF | coord: 2..256
e-value: 2.8E-37
score: 128.3
coord: 249..412
e-value: 5.7E-19
score: 68.2 |
| IPR038538 | MTERF superfamily, mitochondrial/chloroplastic | GENE3D | 1.25.70.10 | | coord: 200..430
e-value: 8.6E-39
score: 135.3
coord: 1..170
e-value: 7.2E-39
score: 135.6 |
| None | No IPR available | PANTHER | PTHR13068:SF36 | TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC | coord: 101..145
coord: 66..108 |
| None | No IPR available | PANTHER | PTHR13068 | CGI-12 PROTEIN-RELATED | coord: 314..373
coord: 169..219 |
| None | No IPR available | PANTHER | PTHR13068 | CGI-12 PROTEIN-RELATED | coord: 244..300 |
| None | No IPR available | PANTHER | PTHR13068 | CGI-12 PROTEIN-RELATED | coord: 101..145
coord: 66..108 |
| None | No IPR available | PANTHER | PTHR13068:SF36 | TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC | coord: 244..300 |
| None | No IPR available | PANTHER | PTHR13068 | CGI-12 PROTEIN-RELATED | coord: 12..73 |
| None | No IPR available | PANTHER | PTHR13068:SF36 | TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC | coord: 12..73 |
| None | No IPR available | PANTHER | PTHR13068:SF36 | TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC | coord: 169..219
coord: 185..256 |
| None | No IPR available | PANTHER | PTHR13068 | CGI-12 PROTEIN-RELATED | coord: 185..256 |
| None | No IPR available | PANTHER | PTHR13068:SF36 | TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC | coord: 314..373 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-ischiensis_contig102.1763.1 ID=prot_S-ischiensis_contig102.1763.1|Name=mRNA_S-ischiensis_contig102.1763.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=441bp
MGLDSGKVTNMRSRNRALDQYSVEDTLQPKVQWLEKALGLERKEVAKMVL
KRPQVLGYSITDNMEPKVQWLEERLDLECKEVAKMVFKDPQLFGYSIEDN
LEPKVQWLEEQLGLEGKEVAKMVFKDPQLFGYSIRDNLEPKVQWLEERLG
LERKEVVNMACGFPPVLGLSITDNLEPKLQWLEKRLGMEGKEVAKMVFKD
ERILSCSIEDNLEPKLQWLEERLGLERKEVAKMVHMRPQLFHYSIKDNLE
PKLQWLEERLGLECKEVARMVFKDPTLFSFSIEDNLEPKVRWMREELPLD
GEAVSRMLLARPELLRPSLERTLRPKMPWLRDALGASPEQCANIVHKYPE
LLGCSIDNNLKPTLDFFMEELGGGRDAPQTRAIILGGMGVLKASLSKRLR
PRAEAMRAAGLVPDFAAHGRIMAGYTDKKFEGWLRRPHAQ* back to top
Annotated Terms
The following terms have been associated with this polypeptide:
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