prot_S-ischiensis_contig10.1599.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig10.1599.1
Unique Nameprot_S-ischiensis_contig10.1599.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length67
Homology
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Match: UPI00189DDB5A (tripartite motif containing 35-28 n=1 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189DDB5A)

HSP 1 Score: 59.3 bits (142), Expect = 1.140e-8
Identity = 23/46 (50.00%), Postives = 33/46 (71.74%), Query Frame = 0
Query:   13 EHLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKECPLCKEEI 58
            + L C VC   F +PV+LPC+H+ C EC ++S+EF K CPLC+E +
Sbjct:   19 KDLTCPVCHGIFQDPVLLPCSHSFCRECLQKSIEFNKNCPLCREVV 64          
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Match: A0A0D7B749_9AGAR (Postreplication repair E3 ubiquitin-protein ligase RAD18 n=1 Tax=Cylindrobasidium torrendii FP15055 ss-10 TaxID=1314674 RepID=A0A0D7B749_9AGAR)

HSP 1 Score: 57.4 bits (137), Expect = 5.030e-8
Identity = 22/54 (40.74%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    2 ESLGPGLRHVGEHLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKECPLCK 55
             S  PGLR +   L+C +C   F  PV L C H+ CS+C +Q++  ++ECP C+
Sbjct:   17 SSTAPGLRALDNALRCTICKELFSGPVSLRCGHSFCSQCIRQALSAKQECPTCR 70          
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Match: A0A7S1J7X5_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J7X5_9EUGL)

HSP 1 Score: 55.5 bits (132), Expect = 1.940e-7
Identity = 18/51 (35.29%), Postives = 30/51 (58.82%), Query Frame = 0
Query:    8 LRHVGEHLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKECPLCKEEI 58
            ++ +   L+C +C+ +F  P++ PCNH  C EC +  +    +CPLCK  I
Sbjct:   27 VQQIANELRCIICYDFFEEPLVTPCNHCFCKECIEHHLRLSSKCPLCKTHI 77          
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Match: UPI001CC6AE6C (BRCA1-associated RING domain protein 1-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC6AE6C)

HSP 1 Score: 54.7 bits (130), Expect = 4.930e-7
Identity = 22/55 (40.00%), Postives = 34/55 (61.82%), Query Frame = 0
Query:    4 LGPGLRHVGE---HLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKECPLCK 55
            L P L H+ +    L+C VC +    P+++PCNH +CS C  ++ EF  ECP+C+
Sbjct:   13 LNPWLLHLQKMCLELKCSVCLNLLNRPLLMPCNHILCSSCIPRTTEFGSECPVCR 67          
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Match: UPI001C4F31ED (BRCA1-associated RING domain protein 1-like n=1 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F31ED)

HSP 1 Score: 52.0 bits (123), Expect = 1.460e-6
Identity = 21/54 (38.89%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    4 LGPGLRHVGE---HLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKECPLC 54
            L P L H+ +    L+C +C +    P+++PCNH +CS C  +S EF  +CP+C
Sbjct:   13 LNPWLLHLQKMCLELKCPLCLNLLNRPLLIPCNHILCSSCIPRSTEFGSKCPVC 66          
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Match: UPI0010FC8C38 (LON peptidase N-terminal domain and RING finger protein 2-like n=2 Tax=Acropora TaxID=6127 RepID=UPI0010FC8C38)

HSP 1 Score: 53.1 bits (126), Expect = 1.720e-6
Identity = 18/46 (39.13%), Postives = 29/46 (63.04%), Query Frame = 0
Query:   13 EHLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKECPLCKEEI 58
            E L+C +C+S  Y  +   C H  C +C K+S++FR ECP C++ +
Sbjct:  396 EDLECKICYSILYQAITTDCGHTFCRDCLKRSLDFRPECPYCRQSL 441          
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Match: A0A261Y9C5_9FUNG (HECT-type E3 ubiquitin transferase n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y9C5_9FUNG)

HSP 1 Score: 48.9 bits (115), Expect = 5.550e-5
Identity = 19/46 (41.30%), Postives = 27/46 (58.70%), Query Frame = 0
Query:   13 EHLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKECPLCKEEI 58
              L C VC S FY+PV+ PC H  C EC  ++++    CP C++ I
Sbjct: 1042 NELDCNVCLSLFYDPVITPCGHTFCQECLLRTIDHGPYCPTCRQLI 1087          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig10.1599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
UPI00189DDB5A1.140e-850.00tripartite motif containing 35-28 n=1 Tax=Sebastes... [more]
A0A0D7B749_9AGAR5.030e-840.74Postreplication repair E3 ubiquitin-protein ligase... [more]
A0A7S1J7X5_9EUGL1.940e-735.29Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]
UPI001CC6AE6C4.930e-740.00BRCA1-associated RING domain protein 1-like n=1 Ta... [more]
UPI001C4F31ED1.460e-638.89BRCA1-associated RING domain protein 1-like n=1 Ta... [more]
UPI0010FC8C381.720e-639.13LON peptidase N-terminal domain and RING finger pr... [more]
A0A261Y9C5_9FUNG5.550e-541.30HECT-type E3 ubiquitin transferase n=1 Tax=Bifigur... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 17..54
e-value: 8.8E-6
score: 35.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 17..55
score: 11.486
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 3..67
e-value: 1.1E-15
score: 59.2
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 14..59
e-value: 1.7E-11
score: 43.8
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 11..61
IPR031099BRCA1-associatedPANTHERPTHR13763BREAST CANCER TYPE 1 SUSCEPTIBILITY PROTEIN BRCA1coord: 1..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig10contigS-ischiensis_contig10:2992744..2993105 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig10.1599.1mRNA_S-ischiensis_contig10.1599.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig10 2992666..2993105 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig10.1599.1 ID=prot_S-ischiensis_contig10.1599.1|Name=mRNA_S-ischiensis_contig10.1599.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=67bp
MESLGPGLRHVGEHLQCCVCFSYFYNPVMLPCNHAMCSECSKQSMEFRKE
CPLCKEEIHNKRSVGRN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR031099BRCA1-associated