prot_S-ischiensis_contig1.1213.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1213.1
Unique Nameprot_S-ischiensis_contig1.1213.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length191
Homology
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A6H5JU68_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JU68_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 4.700e-42
Identity = 93/194 (47.94%), Postives = 111/194 (57.22%), Query Frame = 0
Query:    3 FFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAAR------RRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPP-AALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQY 189
            F+FDGR   +AMRA GARL   R      R +Y++LG+ +LL+   EA  A+       R      L +S       E   G+  G          P+ L G  +G +A      + P  PA+    TP   AL PPS RRCSLCMS REN AATPCGHLFCW C+VGWCQTNPECPLCRQPV PQSIVC+YQY
Sbjct:  256 FYFDGRFANVAMRAVGARLAYARPEQEAARTRYAVLGLLLLLQAAAEAATASAETAERWRATARAALSESFPRSTEGEAVCGEGGG----------PSDL-GEGVGDTA------LPPRVPAATRGRTPADVALFPPSRRRCSLCMSSRENVAATPCGHLFCWECIVGWCQTNPECPLCRQPVAPQSIVCLYQY 432          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A836CLL0_9STRA (Peroxisome biogenesis factor 10 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLL0_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.220e-27
Identity = 46/55 (83.64%), Postives = 50/55 (90.91%), Query Frame = 0
Query:  136 RCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            RC+LCM PRE+TAAT CGHLFCW C+VGWC+TNPECPLCRQP EPQSIVCVY YD
Sbjct:  316 RCALCMGPREHTAATLCGHLFCWECIVGWCETNPECPLCRQPAEPQSIVCVYHYD 370          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A2I0VIK7_9ASPA (Peroxisome biogenesis factor 10 n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0VIK7_9ASPA)

HSP 1 Score: 103 bits (256), Expect = 3.670e-23
Identity = 57/190 (30.00%), Postives = 97/190 (51.05%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            M F+F+G ++ ++ RAAG R +    P+ + R +Y +LG+F+L+++ + A    RR   + +              H    G  ++     +P +    ++   A      +G     S  + T   + +P S  +C+LC+S R++  AT CGH+FCW C++ WC   PECPLCR P+   S+VC+Y  D
Sbjct:  134 MFFYFEGLYYHISKRAAGIRYVFIGKPSNQ-RLRYQILGIFLLVQLCILAAEGLRRSNFSSIA----------SSVHPSSLGGHQSSTGRGLPVLNEDGNLITDAAIKKSSLG-----SDSLTT--ESQVPVSISKCTLCLSTRQHPTATTCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCIYHSD 305          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A6P4A8F7_ZIZJJ (peroxisome biogenesis factor 10 n=3 Tax=Ziziphus jujuba TaxID=326968 RepID=A0A6P4A8F7_ZIZJJ)

HSP 1 Score: 104 bits (259), Expect = 4.700e-23
Identity = 62/191 (32.46%), Postives = 95/191 (49.74%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILP-GPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            M F+F+G ++ ++ RAAG R +    P+ + R +Y +LGVF+L+++ + AV   RR   + +             AH    G   + A   +P +   G  I  S          SS +     T           +C+LC+S R++  ATPCGH+FCW C++ WC   PECPLCR P+   S+VC+Y  D
Sbjct:  224 MFFYFEGLYYHISKRAAGIRYVFIGKPSNQ-RPRYQILGVFLLVQLCIIAVEGLRRSNLSSIA----------SSAHHTSSGMHHSSAERGLPVLNEEGNLISVSTDKRSWMYDSSSTSESQATT--------GMSKCTLCLSDRQHPTATPCGHVFCWSCIMEWCNEKPECPLCRTPITHSSLVCLYHSD 395          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A6I9TKZ1_SESIN (peroxisome biogenesis factor 10 isoform X1 n=2 Tax=Lamiales TaxID=4143 RepID=A0A6I9TKZ1_SESIN)

HSP 1 Score: 104 bits (259), Expect = 4.800e-23
Identity = 64/190 (33.68%), Postives = 97/190 (51.05%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            M F+F+G ++ L+ RAAG R +    P  + R +Y +LGVF+L+++ + A    RR   + L   S      Q+ +HG  + S    A   +P +    ++          V  S+P S    +           +C+LC+S R+N  ATPCGH+FCW C++ WC   PECPLCR P    S+VC+Y  D
Sbjct:  227 MFFYFEGLYYHLSKRAAGIRYVFIGKPTNQ-RPRYQILGVFLLVQLCIIAAEGLRR---SNL---STFATSFQQTSHGAYQTS----AGRGLPVLNEEGNLITEDSGKSSWVHESTPTSESQAS--------GVSKCTLCLSNRQNPTATPCGHVFCWNCIMEWCNEKPECPLCRSPATHSSLVCLYHSD 397          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A067GGG7_CITSI (RING-type domain-containing protein n=7 Tax=Citrus TaxID=2706 RepID=A0A067GGG7_CITSI)

HSP 1 Score: 103 bits (258), Expect = 5.130e-23
Identity = 59/190 (31.05%), Postives = 94/190 (49.47%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            M F+F+G ++ ++ R AG R +    P  + R +Y +LGVF+L+++ + A    RR   + +              H    G ++A     +P +    S+  S       V  S+  S     P  +       +C+LC+S R++  ATPCGH+FCW C++ WC   PECPLCR P+   S+VC+Y  D
Sbjct:  203 MFFYFEGLYYHISKRTAGIRYVFIGKPTNQ-RPRYQILGVFLLIQLCIIAAEGLRRSNLSSIA----------SSVHHTSLGFQQASTGRGLPVLNEEGSLIPSESDKGGWVLDSTSTSESQAAPGVS-------KCTLCLSNRQDPTATPCGHVFCWNCIMEWCNEKPECPLCRAPITHSSLVCLYHSD 374          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A5N6RP28_9ROSI (RING-type domain-containing protein n=2 Tax=Betulaceae TaxID=3514 RepID=A0A5N6RP28_9ROSI)

HSP 1 Score: 103 bits (258), Expect = 6.800e-23
Identity = 58/190 (30.53%), Postives = 96/190 (50.53%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            MLF+F+G ++ ++ RAAG   +    P+ + R +Y +LGVF+L+++ V A    RR   + +              H    G+  + A   +P +    ++  +        GP S ++ +              +C+LC+S R++  ATPCGH+FCW C++ WC   PECPLCR P+   S+VC+Y  D
Sbjct:  230 MLFYFEGLYYHISKRAAGIHYVFIGKPSNQ-RPRYQILGVFLLIQLCVIAAEGLRRSNLSSIA----------SSVHQTSFGTHSSSAGRGLPVLNEEGNLISADNSNKGSWGPDSSSTSESQV---------TSKCTLCLSNRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPMTHSSLVCLYHSD 399          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: UPI0009E5C671 (peroxisome biogenesis factor 10 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E5C671)

HSP 1 Score: 103 bits (256), Expect = 1.190e-22
Identity = 57/190 (30.00%), Postives = 95/190 (50.00%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            M F+F+G ++ ++ RAAG R +    P+ + R +Y +LG+F+L+++ + A    RR   + +              H    G   + +   +P +    ++   A      +G       D  T   +  P S  +C+LC+S R++  AT CGH+FCW C++ WC   PECPLCR P+   S+VC+Y  D
Sbjct:  218 MFFYFEGLYYHISKRAAGIRYVFIGKPSNQ-RMRYQILGIFLLVQLCILAAEGLRRSNFSSI----------SSSGHPSTLGGHLSSSGRGLPVLNEDGNLISDATIKMGSLGT------DSLTTSESQAPVSIGKCTLCLSTRQHPTATTCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCIYHSD 390          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: UPI00109F5807 (peroxisome biogenesis factor 10 isoform X1 n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=UPI00109F5807)

HSP 1 Score: 103 bits (256), Expect = 1.390e-22
Identity = 57/190 (30.00%), Postives = 97/190 (51.05%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            M F+F+G ++ ++ RAAG R +    P+ + R +Y +LG+F+L+++ + A    RR   + +              H    G  ++     +P +    ++   A      +G     S  + T   + +P S  +C+LC+S R++  AT CGH+FCW C++ WC   PECPLCR P+   S+VC+Y  D
Sbjct:  234 MFFYFEGLYYHISKRAAGIRYVFIGKPSNQ-RLRYQILGIFLLVQLCILAAEGLRRSNFSSIA----------SSVHPSSLGGHQSSTGRGLPVLNEDGNLITDAAIKKSSLG-----SDSLTT--ESQVPVSISKCTLCLSTRQHPTATTCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCIYHSD 405          
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Match: A0A804L5U9_MUSAM (RING-type domain-containing protein n=2 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804L5U9_MUSAM)

HSP 1 Score: 102 bits (254), Expect = 2.350e-22
Identity = 58/194 (29.90%), Postives = 96/194 (49.48%), Query Frame = 0
Query:    1 MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEAVMAARRRLPAGLLRDSXXXXXXQEGAHGQRRGSEEAEAAARVPAILPGPSIGQSAGXXXXXVGPSSPASGDMYTPPAALLPPSAR----RCSLCMSPRENTAATPCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD 190
            M F+F+G ++ ++ RAAG R +    P+ + R +Y +LGVF+L+++ +      RR   + +              H    GS ++ +   +P +                +  ++   G   T   AL  P +     +C+LC+S R++  ATPCGH+FCW C++ WC   PECPLCR P+   S+VC+Y  D
Sbjct:  221 MFFYFEGLYYHVSKRAAGIRYVFIGKPSNQ-RPRYQILGVFLLIQLCILGAEGLRRSNLSSITTS----------VHHTSLGSHQSSSGRDLPVL----------NEDGNPIPDNNSNKGSWATDSFALSEPQSSGGMSKCTLCLSSRQHPTATPCGHVFCWNCIMEWCNEKPECPLCRTPITHSSLVCIYHAD 393          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1213.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JU68_9PHAE4.700e-4247.94RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CLL0_9STRA1.220e-2783.64Peroxisome biogenesis factor 10 n=1 Tax=Tribonema ... [more]
A0A2I0VIK7_9ASPA3.670e-2330.00Peroxisome biogenesis factor 10 n=1 Tax=Dendrobium... [more]
A0A6P4A8F7_ZIZJJ4.700e-2332.46peroxisome biogenesis factor 10 n=3 Tax=Ziziphus j... [more]
A0A6I9TKZ1_SESIN4.800e-2333.68peroxisome biogenesis factor 10 isoform X1 n=2 Tax... [more]
A0A067GGG7_CITSI5.130e-2331.05RING-type domain-containing protein n=7 Tax=Citrus... [more]
A0A5N6RP28_9ROSI6.800e-2330.53RING-type domain-containing protein n=2 Tax=Betula... [more]
UPI0009E5C6711.190e-2230.00peroxisome biogenesis factor 10 n=1 Tax=Phalaenops... [more]
UPI00109F58071.390e-2230.00peroxisome biogenesis factor 10 isoform X1 n=2 Tax... [more]
A0A804L5U9_MUSAM2.350e-2229.90RING-type domain-containing protein n=2 Tax=Musa a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 137..174
e-value: 3.2E-6
score: 36.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 137..175
score: 12.784
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 132..182
e-value: 8.2E-14
score: 52.8
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 135..179
e-value: 3.5E-10
score: 39.6
NoneNo IPR availablePANTHERPTHR23350:SF0PEROXISOME BIOGENESIS FACTOR 10coord: 1..190
NoneNo IPR availablePANTHERPTHR23350PEROXISOME ASSEMBLY PROTEIN 10coord: 1..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..54
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 55..190
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..32
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 136..181
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 152..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:8243825..8245872 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1213.1mRNA_S-ischiensis_contig1.1213.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 8243585..8246412 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1213.1 ID=prot_S-ischiensis_contig1.1213.1|Name=mRNA_S-ischiensis_contig1.1213.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=191bp
MLFFFDGRHHTLAMRAAGARLMLNRTPAGEPRAQYSLLGVFMLLRVVVEA
VMAARRRLPAGLLRDSAGGGGGQEGAHGQRRGSEEAEAAARVPAILPGPS
IGQSAGAGGGGVGPSSPASGDMYTPPAALLPPSARRCSLCMSPRENTAAT
PCGHLFCWYCVVGWCQTNPECPLCRQPVEPQSIVCVYQYD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS