prot_S-ischiensis_contig1.1198.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1198.1
Unique Nameprot_S-ischiensis_contig1.1198.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length201
Homology
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BLAST of mRNA_S-ischiensis_contig1.1198.1 vs. uniprot
Match: D8LTA4_ECTSI (Transmembrane protein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTA4_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 8.940e-34
Identity = 85/182 (46.70%), Postives = 112/182 (61.54%), Query Frame = 0 
Query:    1 MARLRRHWGHAKAEGSVLEPALRGGLEGLALVHQESSPASLLPGEGGPLAAALE----DGATIAGMRRRKHAQVLVGDRNRRILLKLLAVSAFLKDRTARNLKPSPDMLARLHAETEEALRPPLRADCQGALKTLCSQWKKVIQKWERDFARANGRPPGLEEKEEVAGDWYAAYRRLHFALD 178
            M  +R  W  AKAE S LEPAL   LE LALVH     A  +  EGG L  ALE    D   +AGM+RR+ AQ L+ DR +R+++KL AVSAFL  R  R+   S   + RL  ETE     PL AD + ++KT+C QWK++IQK ER++  A+G PP L +KEE + +WY  Y++L  AL+
Sbjct:  535 MRHVRAIWAEAKAEDSALEPALGAALERLALVHARM--AYRVKQEGGGLTEALEEALLDPTVVAGMQRRRRAQALMTDRQKRVMIKLFAVSAFLNHRDFRD--SSAASVLRLRDETERIFSQPLTADSRASVKTICMQWKRLIQKSEREYEEAHGHPPLLSDKEENS-EWYGFYKKLRAALE 711
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTA4_ECTSI8.940e-3446.70Transmembrane protein, putative n=2 Tax=Ectocarpus... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:8107803..8110861 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1198.1mRNA_S-ischiensis_contig1.1198.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 8107258..8110861 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1198.1 ID=prot_S-ischiensis_contig1.1198.1|Name=mRNA_S-ischiensis_contig1.1198.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=201bp
MARLRRHWGHAKAEGSVLEPALRGGLEGLALVHQESSPASLLPGEGGPLA
AALEDGATIAGMRRRKHAQVLVGDRNRRILLKLLAVSAFLKDRTARNLKP
SPDMLARLHAETEEALRPPLRADCQGALKTLCSQWKKVIQKWERDFARAN
GRPPGLEEKEEVAGDWYAAYRRLHFALDRARALLVDPLTARRAAARLVGV
G
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