prot_S-ischiensis_contig1.1129.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1129.1
Unique Nameprot_S-ischiensis_contig1.1129.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length236
Homology
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: A0A212KW08_9CHLA (Uncharacterized protein n=1 Tax=Chlamydiales bacterium SCGC AG-110-P3 TaxID=1871323 RepID=A0A212KW08_9CHLA)

HSP 1 Score: 67.8 bits (164), Expect = 5.170e-10
Identity = 43/110 (39.09%), Postives = 65/110 (59.09%), Query Frame = 0
Query:   16 DKPQAVVEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASFVL-LRDTAFVKGDIRATTLQVDPGVCIQGVVTTA 124
            ++P   + +G+  KG++ FKR LR+DG F G L  +DG+    L +GP G+V ++V  + E ++EG + G++     L LR  A V GDI+A  L VD GV I G V  +
Sbjct:  119 EEPDTTLGEGVVFKGELTFKRLLRIDGQFEGDLV-SDGK----LIVGPTGIVKSNVR-MHEAIIEGRVEGNITVQERLELRCNAQVIGDIKAKQLSVDEGVSIVGHVAVS 222          
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: A0A7C6X1E2_9FIRM (Polymer-forming cytoskeletal protein n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6X1E2_9FIRM)

HSP 1 Score: 57.4 bits (137), Expect = 5.480e-7
Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 0
Query:   19 QAVVEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASFVL-LRDTAFVKGDIRATTLQVDPGVCIQG 119
            ++++ +G+EIKG +R K  LR++G   G + C     +G + +G   V+ ADV+    V + G L+G+V  S  L L  TA VKGDI+  TL V  G    G
Sbjct:   15 ESLLGKGIEIKGTVRSKGSLRIEGSAEGNVEC-----EGDVTVGETAVLNADVTA-QNVTIGGTLSGTVTCSGRLELLPTARVKGDIKVGTLVVSEGAIFSG 110          
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: A0A2G6FJM8_9DELT (Cell shape determination protein CcmA n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A2G6FJM8_9DELT)

HSP 1 Score: 57.0 bits (136), Expect = 8.880e-7
Identity = 35/117 (29.91%), Postives = 60/117 (51.28%), Query Frame = 0
Query:    8 QELPHVLVDKPQAVVEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASFVLLRDTAFVKGDIRATTLQVDPGVCIQGVVTTA 124
            QE+  V      ++++ G+ + G+IRFK  +R+DG  TG +   +GE    L +   G +  DVS +     +G L+G+  A  +  R    +KG I   +L V+PG  ++G +  A
Sbjct:   10 QEMKKVESQTISSIIDGGMTVSGEIRFKGKVRIDGTVTGDI---EGEH---LILSETGKIKGDVS-VVSFNCQGELDGNATAGMLTARKGCSIKGKIETESLTVEPGALLEGEIKVA 119          
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: Q01Z51_SOLUE (Uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) TaxID=234267 RepID=Q01Z51_SOLUE)

HSP 1 Score: 56.6 bits (135), Expect = 1.800e-6
Identity = 34/111 (30.63%), Postives = 58/111 (52.25%), Query Frame = 0
Query:   17 KPQAVVEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASF-VLLRDTAFVKGDIRATTLQVDPGVCIQGVVTTATP 126
            K  A +   + IKG+IR +  L VDG+  G L     E Q  L +GP G V A++    EV++ G + G+V+ +  + +R+   + GDI++  + +D G   +G +    P
Sbjct:   42 KQTATIGPSMTIKGEIRAREELLVDGEVEGLL-----ESQALLTVGPNGKVRANIKA-REVVIYGSVRGNVEVTEKIAIREQGSLIGDIKSAGISIDDGAYFKGSIDIMRP 146          
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: A0A2S6I3W9_9BACT (Cytoskeletal protein CcmA (Bactofilin family) n=3 Tax=Lewinella TaxID=70994 RepID=A0A2S6I3W9_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 3.240e-6
Identity = 36/102 (35.29%), Postives = 55/102 (53.92%), Query Frame = 0
Query:   22 VEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASFVL-LRDTAFVKGDIRATTLQVDPGVCIQGVVT 122
            +++   IKG+I+    +R+DG   G L C     +  L IG  G +T DV      M+EG  +G++    +L L+DTA VKG++RA+ + V  G  I G  T
Sbjct:   27 IDEHTSIKGNIQAGGDIRIDGKLDGDLVC-----KAKLIIGERGSITGDVD-CQNAMIEGTFSGTIIVRDLLTLKDTARVKGNVRASKMAVGSGCLIDGQCT 122          
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: A0A1V5J324_9DELT (Polymer-forming cytoskeletal n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A1V5J324_9DELT)

HSP 1 Score: 56.2 bits (134), Expect = 3.450e-6
Identity = 39/113 (34.51%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   19 QAVVEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASF-VLLRDTAFVKGDIRATTLQVDPGVCIQGVVTTATPRAAS 130
            + V+    EIKG I+FK  LR+DG F G +     + +G L IG  G   A++  +  ++VEG   G++     V LR TA + GDI A  L +  GV I G  +  + +++S
Sbjct:   46 ETVISPDAEIKGSIKFKDSLRIDGTFEGEI-----DSKGTLFIGKGGSTKAEIH-VGNIIVEGKSEGNITCEDKVELRATAKIIGDITAARLTIAEGVNIIGKCSVTSEKSSS 152          
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: A0A317J2Z2_9BACT (Polymer-forming cytoskeletal protein n=1 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A317J2Z2_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 6.460e-6
Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 0
Query:   17 KPQAVVEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASF-VLLRDTAFVKGDIRATTLQVDPGVCIQGVVTTATP 126
            K  A +   + IKG+IR +  L VDG+  G L     E    L +GP G V A++    EV+V G + G+V  +  + +RD   + GDI+   + +D G   +G +    P
Sbjct:   38 KQVAAIGASMNIKGEIRTREELYVDGEVEGSL-----ESHSLLTVGPNGKVRANIKA-REVVVFGSVRGNVDVTEKIAIRDKGSLIGDIKTAGISIDDGAYFKGSIDIMRP 142          
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Match: A0A7R8QH67_9BACT (Putative Cell shape determination protein CcmA n=1 Tax=Methylacidimicrobium sp. AP8 TaxID=2730359 RepID=A0A7R8QH67_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 1.460e-5
Identity = 35/101 (34.65%), Postives = 58/101 (57.43%), Query Frame = 0
Query:   20 AVVEQGLEIKGDIRFKRFLRVDGDFTGCLTCTDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASFVL-LRDTAFVKGDIRATTLQVDPGVCIQG 119
            +VV  G +++G++ F+  + ++G F+G +   +G    CL IGPE  V AD+  L +++VEG + GS+ A   L LR+ + V+G IR   L +      QG
Sbjct:   95 SVVAVGTQLRGELAFRGKMTLNGGFSGSIHAAEG----CLWIGPEANVRADIEAL-DLVVEGKVRGSLSARKSLELRNGSDVQGSIRCLRLLIAEEAVFQG 190          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1129.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A212KW08_9CHLA5.170e-1039.09Uncharacterized protein n=1 Tax=Chlamydiales bacte... [more]
A0A7C6X1E2_9FIRM5.480e-737.25Polymer-forming cytoskeletal protein n=1 Tax=Firmi... [more]
A0A2G6FJM8_9DELT8.880e-729.91Cell shape determination protein CcmA n=2 Tax=Delt... [more]
Q01Z51_SOLUE1.800e-630.63Uncharacterized protein n=1 Tax=Solibacter usitatu... [more]
A0A2S6I3W9_9BACT3.240e-635.29Cytoskeletal protein CcmA (Bactofilin family) n=3 ... [more]
A0A1V5J324_9DELT3.450e-634.51Polymer-forming cytoskeletal n=2 Tax=unclassified ... [more]
A0A317J2Z2_9BACT6.460e-631.53Polymer-forming cytoskeletal protein n=1 Tax=Acido... [more]
A0A7R8QH67_9BACT1.460e-534.65Putative Cell shape determination protein CcmA n=1... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 21..121
e-value: 3.6E-17
score: 62.4
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 17..132
NoneNo IPR availablePANTHERPTHR35024:SF4coord: 17..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7695794..7698497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1129.1mRNA_S-ischiensis_contig1.1129.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7694591..7698630 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1129.1 ID=prot_S-ischiensis_contig1.1129.1|Name=mRNA_S-ischiensis_contig1.1129.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=236bp
MSPGGTLQELPHVLVDKPQAVVEQGLEIKGDIRFKRFLRVDGDFTGCLTC
TDGEDQGCLRIGPEGVVTADVSGLAEVMVEGCLNGSVQASFVLLRDTAFV
KGDIRATTLQVDPGVCIQGVVTTATPRAASRRESFRQRNGADRPTSLRSD
SEHASAEATTTAAAATASDPAFDDHGVGDCWGTPTGSEPGFAEEAAAVQK
TPSPPPLPPRPAGEEPHMSATNGASPGAPPACKSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B