prot_S-ischiensis_contig1.1118.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1118.1
Unique Nameprot_S-ischiensis_contig1.1118.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length362
Homology
BLAST of mRNA_S-ischiensis_contig1.1118.1 vs. uniprot
Match: D8LKA6_ECTSI (HECT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKA6_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.290e-34
Identity = 101/251 (40.24%), Postives = 138/251 (54.98%), Query Frame = 0
Query:   85 VGANDPERFATLLRAYLAWCHLTAEGRPAYEAVRRMVHDQHVEVLPGIGGGGSGXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXSRRGRPR---RNPKQMLAVLGADTSLTTPEPFSELVLAHPDAVVELVDADPRLLERQLNVLLRVEGAVATSQKLDFIASTM------SSGTLRLEVNRIGDSLEALESVWEQLAAAHPRQLGGELALSYANEPGMGDGPVREFLDTMNQIFRPMGDLATAAA 326
            VG  +P+RF  LLR YLA+ HL  +    Y+A+ ++V +  V+                                XXXXXXXXXXX    R GR +   RNP+ +L  + A+T L  PE F ELV+   DAV E++DADP +LE +L+VLLR+EGAV T QKLD+IAS +      S   L L VNR+ +  E +E   +QLAAA PR +     L + NE G GDGP+RE LD ++++F P   +  + A
Sbjct:  503 VGGTEPDRFGALLRGYLAYLHLADDSEEHYKAIVKVVKENGVDT--------------------------GLASSXXXXXXXXXXXSGVRRGGRGQSAGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLDYIASALEARAGRSGKGLELCVNRMAEPHEIVEVTMQQLAAAPPRAMAPHPELKFVNEQGQGDGPMRELLDLLSEVFNPERTITVSGA 727          
BLAST of mRNA_S-ischiensis_contig1.1118.1 vs. uniprot
Match: A0A6H5JX10_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX10_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.800e-33
Identity = 96/241 (39.83%), Postives = 134/241 (55.60%), Query Frame = 0
Query:   85 VGANDPERFATLLRAYLAWCHLTAEGRPAYEAVRRMVHDQHVEVLPGIGGGGSGXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXSRRGRPR---RNPKQMLAVLGADTSLTTPEPFSELVLAHPDAVVELVDADPRLLERQLNVLLRVEGAVATSQKLDFIASTMSSGT------LRLEVNRIGDSLEALESVWEQLAAAHPRQLGGELALSYANEPGMGDGPVREFLDTMNQIFR 316
            VG+++P+RF  LLR YLA+ HL  E    Y+A+ ++V D  V+                                    XXXXXXXXX  R GR +   RNP+ +L  + A+T L  PE F ELV+   DAV E++DADP +LE +L+VLLR+EGAV T QKL++IAS + +        L L +NR+ +  + +E   +QLAAA P  +     L +ANE G GDGP+RE LD + ++FR
Sbjct:  745 VGSSEPDRFGALLRGYLAYLHLADESEEHYKAIVKVVKDNGVDT------------------------------GLASSXXXXXXXXXVRRGGRGQSGGRNPRNILTAIAAETELGIPEAFRELVVEQSDAVEEILDADPAVLENRLSVLLRIEGAVETPQKLEYIASALDARAGRSRKGLELCINRMAEPHDIVEVTMQQLAAAPPWAMAPHPELKFANEEGQGDGPMRELLDLLREVFR 955          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1118.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LKA6_ECTSI1.290e-3440.24HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JX10_9PHAE2.800e-3339.83HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7597394..7604277 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1118.1mRNA_S-ischiensis_contig1.1118.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7597394..7604462 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1118.1 ID=prot_S-ischiensis_contig1.1118.1|Name=mRNA_S-ischiensis_contig1.1118.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=362bp
MGWSGSRTMHTARCWKTGRASCLTPCGRWSSSFSCPTPTMPPDSCRSPPG
RKTTPWRRYSSRRGASTCRTCGLAWAWRWRCVCTVGANDPERFATLLRAY
LAWCHLTAEGRPAYEAVRRMVHDQHVEVLPGIGGGGSGGGGDGGDGGGGG
PGGGGGRGPGGNAGRGATGGGGGSRRGRPRRNPKQMLAVLGADTSLTTPE
PFSELVLAHPDAVVELVDADPRLLERQLNVLLRVEGAVATSQKLDFIAST
MSSGTLRLEVNRIGDSLEALESVWEQLAAAHPRQLGGELALSYANEPGMG
DGPVREFLDTMNQIFRPMGDLATAAAEAAARQPHGFWQHFPFFRAWEPDP
AAVIPVQAAVAP
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