prot_S-ischiensis_contig1.1040.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1040.1
Unique Nameprot_S-ischiensis_contig1.1040.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length319
Homology
BLAST of mRNA_S-ischiensis_contig1.1040.1 vs. uniprot
Match: D7FNR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR2_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 5.520e-101
Identity = 153/258 (59.30%), Postives = 187/258 (72.48%), Query Frame = 0
Query:   39 PGGGLRMVSTSH-CGAWRVESTVDSGETKYMFVSLFSDGTVHTAVEGASGSGLLGAAKDVGGRWRVKDNEFSLSMDRRSNSRMLDDLRYVGMLKEWSSKIEGCVIEGQMDPAVVGKFKMTPVVASMAKDLKRAAQANAVPTYTPPKYPKSVLAGEWMFMWLGKGSVFRLDLREDGTFESAGGLGSGHLAGRWGTWDAERMYMTVVRTKSKGVHMTADHMFWGTRMLAPEDGAPPVKIGGYIMYGYLEPTCLGKFVMSR 295
            P  GL   ST +  G+WRVES +D+ +   MFV LF DG+VHTAV G  G        D  GRWRV+ NEFSL+++R+S SR LDDL+YVG+LK++SS +EG VIEGQMDPAVVGKFKMTPV +SMA DLK+AA+AN    Y  PKY K+ +AG+W+ MW   G+VFRL L ED  FES  GLGSG L GRW  W  ERM+MTVVR+KS GV M  DHMFWGT++  P D   P+KI GY+MYG+LEPTC+G+F+M R
Sbjct:   29 PAPGLFGRSTPNGLGSWRVESVLDTQKPNSMFVFLFDDGSVHTAVSGTDGK------DDHAGRWRVRGNEFSLTVNRKSQSRFLDDLKYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERMFMTVVRSKSHGVQMHGDHMFWGTKLEGPPDSKIPLKISGYVMYGFLEPTCVGRFIMRR 280          
BLAST of mRNA_S-ischiensis_contig1.1040.1 vs. uniprot
Match: A0A835YV66_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV66_9STRA)

HSP 1 Score: 224 bits (571), Expect = 8.170e-69
Identity = 127/271 (46.86%), Postives = 162/271 (59.78%), Query Frame = 0
Query:   37 RRPGGGLRMVSTSHCGAWRVESTVDSGETKYMFVSLFSDGTVHTAVEGASGSGLLGAAKDVGGRWRVKDNEFSLSMDRRSNSRMLDDLRYVGMLKEWSSKIEGCVIEGQMDPAVVGKFKMTPVVASMAKDLKRAAQANAVPTYTPPKYPKSVLAGEWMFMWLG----KGSVFRLDLREDGTFESAGGLGSGH-LAGRWGTWDAERMYMTVVRTKSKGVHMTADHMFWGTRMLAPEDGAPPVKIGGYIMYGYLEPTCLGKFVMSRVDKAEQE 302
            RRP  GL        G+WR+ES VD   T   F+ LF DGT HTA+   +         + GGRWR + NEF LS+  ++ + M +DLRY+G ++E+S +I G V EGQMDP VVG F+MTPVVASM+ DL   A+         P Y K VL+G W+ +  G    +G VF L L EDG F S  G+G+G  LAGRW TWD E+  +TVVR KS+G  MTADH +WG ++    DG  P +I G IMYGYLEPT +G F M R  +   E
Sbjct:   11 RRPPAGL--------GSWRLESHVDD-VTSTTFIVLFEDGTAHTAILDGN---------NEGGRWRYRANEFQLSITVKNRTGMKEDLRYIGQMQEYSGRIRGSVTEGQMDPFVVGDFQMTPVVASMSTDLMALARRRDEQQSITPLYSKKVLSGPWLLVHSGVSGLRGGVFELMLTEDGGFASVRGVGAGGMLAGRWNTWDREKFILTVVRLKSRGAQMTADHQYWGFKIHG--DGVTPTRITGEIMYGYLEPTSIGCFTMMRPSQLAPE 261          
BLAST of mRNA_S-ischiensis_contig1.1040.1 vs. uniprot
Match: A0A6H5LDX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDX9_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.760e-38
Identity = 72/113 (63.72%), Postives = 85/113 (75.22%), Query Frame = 0
Query:  125 RYVGMLKEWSSKIEGCVIEGQMDPAVVGKFKMTPVVASMAKDLKRAAQANAVPTYTPPKYPKSVLAGEWMFMWLGKGSVFRLDLREDGTFESAGGLGSGHLAGRWGTWDAERM 237
            RYVG+LK++SS +EG VIEGQMDPAVVGKFKMTPV +SMA DLK+AA+AN    Y  PKY K+ +AG+W+ MW   G+VFRL L ED  FES  GLGSG L GRW  W  ER+
Sbjct:  229 RYVGVLKKFSSVVEGSVIEGQMDPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLMWQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERL 341          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1040.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FNR2_ECTSI5.520e-10159.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YV66_9STRA8.170e-6946.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5LDX9_9PHAE1.760e-3863.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 296..316
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..318
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..13
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.777

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:7202123..7208569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1040.1mRNA_S-ischiensis_contig1.1040.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 7201901..7208608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1040.1 ID=prot_S-ischiensis_contig1.1040.1|Name=mRNA_S-ischiensis_contig1.1040.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=319bp
MALKPLLLTLALGRAVHGLLTGAVHPRTFGPSAWNTRRPGGGLRMVSTSH
CGAWRVESTVDSGETKYMFVSLFSDGTVHTAVEGASGSGLLGAAKDVGGR
WRVKDNEFSLSMDRRSNSRMLDDLRYVGMLKEWSSKIEGCVIEGQMDPAV
VGKFKMTPVVASMAKDLKRAAQANAVPTYTPPKYPKSVLAGEWMFMWLGK
GSVFRLDLREDGTFESAGGLGSGHLAGRWGTWDAERMYMTVVRTKSKGVH
MTADHMFWGTRMLAPEDGAPPVKIGGYIMYGYLEPTCLGKFVMSRVDKAE
QEDEDEGENKEEEEEKEG*
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