prot_S-ischiensis_contig1.1010.1 (polypeptide) Schizocladia ischiensis KU_0333

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-ischiensis_contig1.1010.1
Unique Nameprot_S-ischiensis_contig1.1010.1
Typepolypeptide
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Sequence length194
Homology
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BLAST of mRNA_S-ischiensis_contig1.1010.1 vs. uniprot
Match: D8LCE3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCE3_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 4.040e-6
Identity = 38/88 (43.18%), Postives = 48/88 (54.55%), Query Frame = 0 
Query:   78 PTEHVRGKGCNQYGKFALTGVHETSSGHLNLTRIYYEVHSPRD---SSKAAQXXXXXXXXXXXXXXRVPVLVEGAAGPSLAERRAKRS 162
            P   V G+G N+YG+F LTG HE ++G L+LTR YYE    R    S++  +         XXXXX          GPSLAERR KR+
Sbjct:  310 PVVRVSGRGQNKYGEFTLTGGHERATGRLDLTRFYYEKPKERSTVASTRGERSSRGVSHQKXXXXXXXXXXXXXPPGPSLAERRTKRT 397
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig1.1010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LCE3_ECTSI4.040e-643.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig1contigS-ischiensis_contig1:6989154..6989735 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig1.1010.1mRNA_S-ischiensis_contig1.1010.1Schizocladia ischiensis KU_0333mRNAS-ischiensis_contig1 6989154..6989737 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-ischiensis_contig1.1010.1 ID=prot_S-ischiensis_contig1.1010.1|Name=mRNA_S-ischiensis_contig1.1010.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=194bp
EPAEGSKPDGDGSPPQPQDDGVGRQGDAAPPANNERSRENGSGRTATQDA
AATPTAAAAPVAAPAPQDKFAPPEFTGPTEHVRGKGCNQYGKFALTGVHE
TSSGHLNLTRIYYEVHSPRDSSKAAQKAAAGGSAANNKKRRVPVLVEGAA
GPSLAERRAKRSCSGAVYLQRMYELEGDSPRNGGAGHDHWHGQW
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