mRNA_S-ischiensis_contig99.21176.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig99.21176.1
Unique NamemRNA_S-ischiensis_contig99.21176.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: D7FGU9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FGU9_ECTSI)

HSP 1 Score: 687 bits (1772), Expect = 1.570e-244
Identity = 355/469 (75.69%), Postives = 394/469 (84.01%), Query Frame = 3
Query:   96 AEHDAAALLYILATNFLLYVALVLITYLVVKLYIESSPDNPLFDEEITYHRVPATHSGLELTSASVEAKAAG---------------------TPAAARR---------RRPSILDFEV-AEPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYGPGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKWSKALAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF 1409
            AE+DA  LLY+LATNFLLYVALVLITYLVVKLYIES+P NPLF+E  TY+RVPATHSGLELTS +V+A+ A                      TP  ARR         R+ S LDF+   E  M+R+E  R+LI+  VGLNVTFV+WGVLQERILK EYG GE FTYSYGLVF NRFLGF+FS   M+YT+PKWSKALAYEYSFPAVSNM+SSWCQYEALKYVTFPTQ+LSKSFKIVPIMVMGKILGNKEYPFYDYVV+GVI++G+TLFL SSEG+  G DMFGQ E    +ACGMMLL L+LVFDSFTSQWQSRMFTKH+DLSPIQMMFVMTAFSTIFSFVTLVH +ELVPFF+FVSDHPEIHLHF+AFGVCSTIGQLLIFHTIRSFGAVVFAIIMT RIALSILVSCLIYDHPVTE+GLLG+LIVFGAV YRI RR++GKRL++WEGM+DSK  D+FHEWHEHLD 
Sbjct:   47 AEYDAPTLLYVLATNFLLYVALVLITYLVVKLYIESAPGNPLFEEATTYNRVPATHSGLELTSMTVQARIAAAQGAXXXXXXXXXXXXXXTIMTPDGARRESAGGLSLSRQSSWLDFDADLEHTMTRDEVFRRLIILAVGLNVTFVLWGVLQERILKGEYGDGEHFTYSYGLVFMNRFLGFLFSAGMMHYTRPKWSKALAYEYSFPAVSNMLSSWCQYEALKYVTFPTQVLSKSFKIVPIMVMGKILGNKEYPFYDYVVAGVIALGITLFLNSSEGVDFGTDMFGQQEQGSSVACGMMLLALYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMTAFSTIFSFVTLVHQDELVPFFAFVSDHPEIHLHFVAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTTRIALSILVSCLIYDHPVTELGLLGMLIVFGAVFYRINRRLQGKRLLEWEGMDDSKGMDMFHEWHEHLDL 515          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A836CEU6_9STRA (UAA transporter family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEU6_9STRA)

HSP 1 Score: 610 bits (1574), Expect = 1.610e-214
Identity = 314/470 (66.81%), Postives = 369/470 (78.51%), Query Frame = 3
Query:  117 LLYILATNFLLYVALVLITYLVVKLYIESSPDNPLFDEEITYHRVPATHSGLELTSASVE-------------------------------AKAAGTPAAARRRRPSILDFEVA---EPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYGPGEFFTYS-----YGLVFTNRFLGFVFSGVFMYYTKPKWSKALAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF 1409
            +L+ LATNFLLY ALVLITYLVVKLY+ESSPDNPLFDEE++Y R+P+THSG++L   SV+                               A+  G P     RR S+LDFE A   E L  R E ++KL   G+GLNVTFV+WGVLQERILKMEYG G+FFTY      YGLVFTNR LG +FSG  +YYT+P WSKALAYEYS P+V+NM+SSWCQYEALK+VTFPTQ+LSK+FKI PIM+MG++LGNK YP YDY V+G I +GV LF+ SSEGL+LG D FGQ    G + CG+MLLGL+LVFDSFTSQWQSRMFTKH+DLSPIQMMFVM AFST+FS VTLVH  ELVPFF+FV  HPEIHLHFIAF + ST+GQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCL+YDH +TEMG LG+++VF AV YRI+R+M+G+RL+KW G++DSKAP++ HEWHEHLDF
Sbjct:   44 ILFELATNFLLYTALVLITYLVVKLYVESSPDNPLFDEEVSYGRLPSTHSGVDLKPCSVQWSPTCTDSAGNRAAVAAAPSDLWFAVARCPAARTKGGPMQPPSRRRSLLDFEEAADDEVLPPRSEVIKKLAGLGLGLNVTFVLWGVLQERILKMEYGQGDFFTYRQAARFYGLVFTNRALGLLFSGGMLYYTRPTWSKALAYEYSLPSVTNMLSSWCQYEALKFVTFPTQVLSKAFKIAPIMLMGRMLGNKSYPLYDYCVAGTIGLGVALFVTSSEGLRLGADSFGQ---QGAVGCGIMLLGLYLVFDSFTSQWQSRMFTKHRDLSPIQMMFVMNAFSTVFSLVTLVHAGELVPFFNFVGAHPEIHLHFIAFSLLSTVGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLMYDHAITEMGSLGMILVFCAVSYRIQRKMQGQRLVKWRGIDDSKAPEVIHEWHEHLDF 510          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A7S2CE74_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CE74_9STRA)

HSP 1 Score: 430 bits (1106), Expect = 4.510e-144
Identity = 233/459 (50.76%), Postives = 303/459 (66.01%), Query Frame = 3
Query:   75 REMEAAGAEHDAAALLYILATNFLLYVALVLITYLVVKLYIESSPDNPLFDEEITYHRVPATH----SGLELTSASVEAKAAGTPAAARRRRPSILDFEV--------AEPL--MSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYGPGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKWSKALAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF 1409
            R +  A +  DA   L+ILATNFLLY+ALV+ITYL+ K+Y         F   I     P T     S LE+   + E      P     R  S+ +F          AE +  M+++  + +L    +GLNV+F+IWGVLQER+L   Y  GE+F+ SYGLVF NR  GF+ SG+ +Y  KP  ++A+ YE+SFP+VSNM+SSWCQYEALKY++FPT ML K FK+VPIM+MGK LGNK YP YDYVVS +I  G+ LF+ S+E ++ G+D  G  E   G  CG+MLLG FL+FDSFT QWQSRMF +++ LSP  MMF +  FS +FSF+TLVHT EL PF+ FV  HPE+H H + F VCST+GQL IF TI++FGAVVFAIIM VR+ LSI VSC++Y H ++  G+ GL IVF +V YR +R+  GK LI W   +D +  + FHE HEH+D 
Sbjct:   30 RHVSRAVSADDAGTELFILATNFLLYIALVIITYLLQKMY---------FPHSIEKVAAPQTTMEGCSELEMEPLTNEENGISMPTRKLPRASSLNEFAKMIEFQNVNAEDMKTMTKKGVLNRLAFCVMGLNVSFLIWGVLQERMLTQPYNDGEYFSSSYGLVFLNRLGGFIISGLMLYAFKPPHTEAIIYEFSFPSVSNMLSSWCQYEALKYISFPTAMLFKCFKLVPIMLMGKYLGNKTYPAYDYVVSLLIGFGIALFMISTEDMEFGMDSIGTPETWSGTMCGLMLLGFFLLFDSFTGQWQSRMFHQNECLSPFHMMFAVNTFSMVFSFITLVHTKELQPFWEFVVRHPEMHFHVMVFSVCSTVGQLFIFKTIQNFGAVVFAIIMNVRVILSIFVSCVLYSHTISSEGMFGLFIVFASVAYRTQRKTRGKDLIHWRASQD-QGTEWFHEVHEHVDM 478          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A7S2IJR1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJR1_9STRA)

HSP 1 Score: 433 bits (1113), Expect = 7.030e-144
Identity = 238/496 (47.98%), Postives = 315/496 (63.51%), Query Frame = 3
Query:  108 AAALLYILATNFLLYVALVLITYLVVKLYIESSPDNPLFDEE---ITYHRVPATHSG-------------------------------------------LELTSASV--------------EAKAAGTPAAARRRRPSILDFEVAEPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYG--PGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKWSKA-LAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLD 1406
            A A LY+LATNFLLYVA+V+IT +V K+Y  S  +      +   + YHRV  T                                              LE+   S+               +K+AGT         ++  FE  +   SR   ++ L+   + LNVTFV WG+LQER+L   Y    GE+FTYSY LVFTNR    + S +  +Y KP+WS++ + YEYSFP++SNM+SSWCQYEAL+YV+FP   L KSFK+ P+MVMGK+LGNKEYP YDY V+ VI +G+ +F+ S+EGL  G D++G+   +     G++L+ LFL FDSFTSQWQSRMF +H+DLS ++MM   +AFST+ SF+TL+HTNEL P  SFV  H EIHLHF  F +CSTIGQ+LIF+TI++FGAVVF IIMT R+ LSIL+SC++YDH VT +G  GL++V GA+ YRIKR+ EG +LIKW+GM+D KAP+L  EWHEH+D
Sbjct:   74 AEAELYLLATNFLLYVAMVIITTMVAKIYFPSLLERDQAANQARSVAYHRVRETSESYYSSDXXXXXXXXXXXXXXXXXXXVDFDDIGKEEKLRESQGLMLEVERGSLVYKMQQQEKRKQMLRSKSAGTGENGGFEAGAMTTFEFDQRTTSRAAVLKTLMGCSLMLNVTFVTWGLLQERMLTRRYPRLTGEYFTYSYALVFTNRLWTLIMSALLFFYFKPRWSRSTVIYEYSFPSISNMLSSWCQYEALRYVSFPAVTLFKSFKLAPVMVMGKMLGNKEYPQYDYFVALVIGVGLAMFMSSTEGLNFGYDVYGEKSATW---TGILLMFLFLFFDSFTSQWQSRMFQRHRDLSMVEMMLATSAFSTVLSFITLIHTNELGPALSFVYRHSEIHLHFFLFSICSTIGQILIFYTIKNFGAVVFTIIMTTRVLLSILLSCVLYDHEVTGIGFGGLMLVMGAICYRIKRKAEGTQLIKWQGMDDHKAPELVQEWHEHVD 566          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A6S8ZJK7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZJK7_9STRA)

HSP 1 Score: 428 bits (1101), Expect = 3.410e-142
Identity = 233/484 (48.14%), Postives = 312/484 (64.46%), Query Frame = 3
Query:  108 AAALLYILATNFLLYVALVLITYLVVKLYIES--SPDNPLFDEE-ITYHRVPATHSG-------------------------------------LELTSASVEAKA--------AGTPAAARRRRPSILDFEVAEPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYG--PGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKWSKA-LAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLD 1406
            A A LY+LATNFLLYVA+V+IT ++ K+Y  +    DN  +    + Y RV  + S                                      +E+   S+  K          G+         ++L FE  +   SR   ++ L    + LN+TFV WG+LQER+L   Y    GE+FTYSY LVFTNRF   + SG+  +Y KP+WS++ + YEYSFP++SNM+SSWCQYEAL+YV+FP   L KSFK+ P+M MGK+LGNKEYP YDY V+ VI IG+ +F+ S+EG+  G D++G+   +     G+ML+ LFL FDSFTSQWQSRMF +H+DLS +++MF  +AFST+ S +TL+HT+EL P   FV  H EIHLHF  F VCSTIGQ+LIF+TI++FGAVVF IIMT R+ LSI +SC++Y H V+  G LGL++V GAV YRIK+++EGK LIKW+GMED+KA +L  EWHEH+D
Sbjct:   76 AEAELYLLATNFLLYVAMVIITTMIAKIYFPALLERDNSAYQSRSVAYQRVHTSVSDSYYSSDAEDDXXXXXXXXGNFDLNGEENQQKESEGLVMEIERGSIVEKQQKKKKMQRTGSNETGGESPTNLLAFEFDQSTTSRATVLKTLTGCSLMLNLTFVTWGLLQERMLTRRYPRITGEYFTYSYALVFTNRFWTLIMSGLLFFYFKPRWSRSTVIYEYSFPSISNMLSSWCQYEALRYVSFPAVTLFKSFKLAPVMAMGKLLGNKEYPQYDYFVALVIGIGLAMFMSSTEGVNFGYDVYGEEVSA--TWTGIMLMFLFLFFDSFTSQWQSRMFQRHRDLSMLELMFATSAFSTVLSLITLIHTDELGPALDFVWRHSEIHLHFFMFSVCSTIGQILIFYTIKNFGAVVFTIIMTTRVLLSIALSCMLYGHKVSSTGFLGLMVVLGAVCYRIKKKVEGKHLIKWQGMEDTKAHELVQEWHEHVD 557          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A7S3Y164_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y164_HETAK)

HSP 1 Score: 422 bits (1086), Expect = 5.400e-141
Identity = 241/444 (54.28%), Postives = 307/444 (69.14%), Query Frame = 3
Query:   72 GREMEAAGAEHDAAALLYILATNFLLYVALVLITYLVVKLYIESSP-------------------------DNPLFDEEITYHRVPATH--SGLELTSASVEAKAAGTPAAARRRRPS-------ILDF----EVAEPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYGPGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKW-SKALAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIV 1286
            GR++ A+  E+DA  +LYIL TNFLLYVALVL+TYLV KLY+ +                           ++P  DEE +   V      +G+E+T A  EA     PA +   + S       +LD+    E A+   SR E +++L++  +GLN++F+ WGVLQER+L   Y  GEFFTYSY LVFTNR  G V S   +Y+ KP   ++A+ YEYSFP+VSNM+SSWCQYEALKYVTFPTQMLSK FK+VPIMVMGK++GNK YP YDYVV+ VI +G+++FL S+EGL LG D  G+ E + G   G++LLGLFLVFDSFTSQWQ+RMF ++K LSP QMMF +  FSTIFS +TL+HTNEL   + FV  HP+IH+HFI F +CSTIGQL IF+TI++FGAVVFAIIM+ RI LSI VSC  YDH +TEMG +G+LIV
Sbjct:   42 GRKLSAS-TENDAGEVLYILCTNFLLYVALVLLTYLVCKLYLTTDHSWEFIEGISDFKLAPTDSMDCFPNIEDPAEDEEASKPLVEEDEEGAGMEMTGAGEEAPLPPPPAESPLMKRSSSGSLGDLLDYNRWGEDADT-SSRGEVLQRLLVSVLGLNLSFLAWGVLQERMLTQTY-QGEFFTYSYMLVFTNRLGGLVLSAGLLYFFKPPIETRAMIYEYSFPSVSNMLSSWCQYEALKYVTFPTQMLSKCFKLVPIMVMGKVMGNKSYPMYDYVVAAVIGLGISVFLMSTEGLDLGRDATGEAESASGTYTGVLLLGLFLVFDSFTSQWQTRMFDRNKYLSPFQMMFAINFFSTIFSLITLLHTNELTEAWDFVVAHPQIHVHFIVFSICSTIGQLFIFYTIKNFGAVVFAIIMSTRILLSIAVSCYTYDHTITEMGFIGILIV 482          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A7S4NEH4_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NEH4_9STRA)

HSP 1 Score: 425 bits (1092), Expect = 4.270e-140
Identity = 242/489 (49.49%), Postives = 310/489 (63.39%), Query Frame = 3
Query:  108 AAALLYILATNFLLYVALVLITYLVVKLYI-ESSPDNPLFDEEITYHRVP---------------------------------ATHSGLELTSASVEAKAAGTPAAARRRRP------------------SILDFEVAEPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYG--PGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKWSKA-LAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF 1409
            A A L++LATNFLLYVA+V+IT +V K+Y  ES          ++Y RV                                  A     E     +E +  G P   RR R                   S L+FE  + L S+   +++L    + LN+TFV WGVLQER+L  +Y    GE+FTYSY LVFTNR    + SG  + Y KP+WS++ + YEYSFP++SNM+SSWCQYEAL+YV+FP   L K+FK+ P+M MGKILGNKEYP YDYVV+ VI +G+T+F+ S++ L  G D++G+   +     G+MLL  FL FDSFTSQWQSRMF  H+DLS I++MF  +AFSTI SF+TLVH+ EL P  SFV  H EIHLHF  F +CSTIGQL IF+TI++FGAVVF IIMT RI LSI +SC++Y H VT +G LGL++V  AV YRIKR+ EGK+LIKW+GM D KAP+L  EWHEH+D 
Sbjct:  129 AEAELFMLATNFLLYVAMVIITTMVCKIYFPESLERGRTMARSVSYVRVAGEDNTSSXXXXXXXXXXXXXXXXXXXXXXXXVRADEQDSEGLLLEMEPEVTGQPGKKRRSRRKGKSDGKDNNRARSSSSGSFLEFE--QRLTSKTSVLQRLAFCVIMLNLTFVAWGVLQERMLTRKYPRLTGEYFTYSYALVFTNRCWTVIMSGGLLMYLKPRWSQSTVIYEYSFPSISNMLSSWCQYEALQYVSFPAVTLFKAFKLAPVMAMGKILGNKEYPQYDYVVALVIGVGLTMFMSSTDDLHFGYDIYGEEASA--TWTGVMLLFFFLFFDSFTSQWQSRMFQHHRDLSMIELMFATSAFSTILSFITLVHSKELWPALSFVYRHSEIHLHFFMFSMCSTIGQLFIFYTIKNFGAVVFTIIMTTRILLSIALSCILYGHEVTSVGFLGLMMVMCAVCYRIKRKAEGKQLIKWQGMGDDKAPELVQEWHEHVDM 613          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A7S2K8X4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K8X4_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 1.770e-139
Identity = 225/454 (49.56%), Postives = 309/454 (68.06%), Query Frame = 3
Query:  108 AAALLYILATNFLLYVALVLITYLVVKLYIESSPDNPLFDE---------EITYHRVPATHSGLE--------LTSASVEAKAAGTPAAARRRRPSILDFEVAEPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYG--PGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKWSKA-LAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF 1409
            A A LY+LATNFLLYVAL++IT L+ K+Y   S D  L            ++ Y R   +    E        L  A ++ ++    +++R      +DFE  +    +   +++L+   + LN+TFV WGVLQER+L   Y    GE+FTYSY LVF+NRF  F+ +   ++  +P+ SK+ + YEYSFP+VSN++SSWCQYEAL+YV+FP   L KSFK+ P+M+MGK+LGNKEYP YDYVV+ VI  G+ LF+ S++ L  G D +G+ E       G+MLL L+L+FDSFT QWQS+MFT+HKDLS ++M+F  +AFST+ S +TLVHT EL P   FV  H EIHLHF  F +CSTIGQL+IF+TI++FGAVVFA+IMTVR+ +SI +SC++Y H VT  G LG+ +V   V YRIKR+ EG++L++W G++D KAP+L +EWHEHLD 
Sbjct:   42 AEAELYLLATNFLLYVALIIITTLIAKVYFPESLDPSLRVHASVDIPEPVKVEYRRKSLSGDDEEEDEEGARLLEMAELKDQSGSNVSSSRTISAFGVDFEFDQKTTPKLLVLKRLLFCCLMLNMTFVTWGVLQERMLTRRYPRITGEYFTYSYALVFSNRFWTFLLATALLFLLQPQRSKSVIIYEYSFPSVSNLLSSWCQYEALRYVSFPATTLFKSFKLAPVMLMGKLLGNKEYPQYDYVVALVIGGGIALFMSSTDDLHFGYDAYGEKEEH--TLTGIMLLCLYLLFDSFTGQWQSKMFTRHKDLSVMEMLFATSAFSTVLSLITLVHTKELWPALDFVVRHQEIHLHFFLFSICSTIGQLMIFYTIKNFGAVVFALIMTVRVLVSIAISCVLYGHNVTSTGFLGMALVVCGVLYRIKRKAEGEKLLRWAGIDDDKAPELVNEWHEHLDM 493          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A7S2UIR8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UIR8_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 1.460e-138
Identity = 228/475 (48.00%), Postives = 304/475 (64.00%), Query Frame = 3
Query:  120 LYILATNFLLYVALVLITYLVVKLYIESSPDNPLFD----EEITYHRVPATHSG-----------------------------------LELTSASVEAKAAGTPAAARRRRP---SILDFEVAEPLMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYG--PGEFFTYSYGLVFTNRFLGFVFSGVFMYYTKPKWSKA-LAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF 1409
            L++LATNFLLYVA+V+I  +V K+Y   S +           ++Y R     +G                                   LE+       +   +PA   R+     S L+F+  +   SR+  +++L    + LNVTFV WGVLQER+L   Y    GE+FTYSY LVFTNRF   + SG  + Y KP+ S+  + YEYSFP+++NM+SSWCQYEAL+YV+FP   L KSFK+ P+M MGKILGNK YP YDY V+ VI++G+T+F+ SS+ L+ G D+ G       +  G+ML+ LFL FDSFTSQWQSRMF +H+DLS I++MF  +AFST+ S +TL+HT EL P  SFV  H EIHLHF  F +CSTIGQL IF+TI++FGAVVFAIIMT R+ +SI +SC++Y H VT  G LGL++V  AVGYRI R+++GK+L+KW+GM D KA +L  EWHEH+D 
Sbjct:   89 LFMLATNFLLYVAMVIIITMVAKIYFPGSLERGTTGGPVARSVSYVRTDDVENGDASDESPISYGSDAEDSDDCEENDELLEEDETDNLLEMEGEGTLRRTRISPAKKSRQTSVGSSFLEFD--QETASRQSVLKRLSFCVLMLNVTFVTWGVLQERMLTRRYPRFTGEYFTYSYALVFTNRFWTLLMSGALLLYLKPRTSRTTVLYEYSFPSITNMLSSWCQYEALRYVSFPAVTLFKSFKLAPVMAMGKILGNKSYPQYDYFVALVIAVGITMFMSSSDDLEFGYDVHGDRASE--VWTGIMLMSLFLFFDSFTSQWQSRMFQRHRDLSMIELMFATSAFSTVLSLITLIHTGELGPALSFVYRHSEIHLHFFMFSICSTIGQLFIFYTIKNFGAVVFAIIMTTRVLISIALSCIMYGHQVTSTGFLGLVLVVSAVGYRISRKLQGKQLVKWQGMGDEKASELVQEWHEHVDM 559          
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Match: A0A4D9CRX1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRX1_9STRA)

HSP 1 Score: 413 bits (1061), Expect = 3.650e-137
Identity = 235/479 (49.06%), Postives = 301/479 (62.84%), Query Frame = 3
Query:   51 ADKPSHAGREMEAAGAEHDAAALLYILATNFLLYVALVLITYLVVKLYIESSPDNPLFDEEITY--HRVPATHSGLELTSASVEAKAAGTPAAA----RRRRPSILDFEVAEP-----------------LMSREEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYGPGEFFTYSYGLVFTNRFLGFVFSG--VFMY-YTKPKWSKALAYEYSFPAVSNMISSWCQYEALKYVTFPTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEGLQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSPIQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCSTIGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLLIVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF 1409
            A + SH      A G E  A   LY+LA+NFLLY ALV++  ++ KLY+E+ P+         Y  H V    +G    S+S  + AA  P  +    + +  SIL+F    P                 L ++ E +R L+    GL  +F++WG+LQER+L M Y  GE+FTYSYGLVFTNR    + S   V+MY +     S A  YEYSFP+VSNM+SSWCQYEAL YVTFPTQ LSKSFK+VPIM+MG++L NK YP Y+Y  +  I +G TLF+ ++E L+LG+D FGQ E   G  CG+MLL LFL FDSFTSQWQSRMF+KH ++SP+ MMF + AFS +FSF+TLVHT EL PFF F+S HP IHLHF  F +CSTIGQL IF TI++FG VVFAIIM+ RI LSI  SC +Y HP+  +G                     +RL++WEGM+D +AP L  E+HEHLD 
Sbjct:   30 ASELSHKVPLASAHGREQTAGVELYLLASNFLLYTALVIVAIMISKLYLEAEPNASPRSRARHYSSHDVLELFAGSRPPSSSSFSPAAPIPVVSLPIGKGKSGSILNFAAMSPNPDASALGEGELPISPGLRTKGEVLRTLLFCTAGLICSFLVWGILQERMLTMPYRNGEYFTYSYGLVFTNRLFSLILSSILVWMYEWESLTLSSAPLYEYSFPSVSNMLSSWCQYEALAYVTFPTQTLSKSFKLVPIMLMGRMLTNKRYPLYEYATAISIGLGNTLFMMATENLELGVDSFGQVEDKSGTWCGVMLLLLFLFFDSFTSQWQSRMFSKH-EISPVIMMFYLNAFSVVFSFITLVHTRELTPFFHFISKHPSIHLHFWLFSICSTIGQLFIFLTIKTFGPVVFAIIMSTRILLSIAASCFLYGHPIPPLG---------------------QRLVQWEGMDDEEAPYLMKEFHEHLDM 486          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig99.21176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FGU9_ECTSI1.570e-24475.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CEU6_9STRA1.610e-21466.81UAA transporter family-domain-containing protein n... [more]
A0A7S2CE74_9STRA4.510e-14450.76Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S2IJR1_9STRA7.030e-14447.98Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6S8ZJK7_9STRA3.410e-14248.14Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3Y164_HETAK5.400e-14154.28Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4NEH4_9STRA4.270e-14049.49Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2K8X4_9STRA1.770e-13949.56Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2UIR8_9STRA1.460e-13848.00Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A4D9CRX1_9STRA3.650e-13749.06Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig99contigS-ischiensis_contig99:203717..211895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score685.3
Seed ortholog evalue1.9e-194
Seed eggNOG ortholog2880.D7FGU9
Preferred nameSLC35B2
KEGG koko:K15276
KEGG TC2.A.7.11.2,2.A.7.11.3
GOsGO:0000003,GO:0000139,GO:0000295,GO:0003002,GO:0003006,GO:0003674,GO:0005215,GO:0005346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0006029,GO:0006082,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007389,GO:0008150,GO:0008152,GO:0008509,GO:0008514,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009798,GO:0009950,GO:0009953,GO:0009987,GO:0009994,GO:0012505,GO:0015012,GO:0015075,GO:0015215,GO:0015216,GO:0015605,GO:0015711,GO:0015748,GO:0015865,GO:0015868,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0018130,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022857,GO:0030154,GO:0030166,GO:0030173,GO:0030176,GO:0030201,GO:0031090,GO:0031224,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034220,GO:0034641,GO:0034645,GO:0034654,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0046390,GO:0046483,GO:0046963,GO:0046964,GO:0048468,GO:0048469,GO:0048477,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050427,GO:0050428,GO:0051179,GO:0051234,GO:0051503,GO:0051704,GO:0055085,GO:0055086,GO:0071702,GO:0071704,GO:0071705,GO:0072348,GO:0072521,GO:0072522,GO:0072530,GO:0090407,GO:0098588,GO:0098656,GO:0098791,GO:0098827,GO:1901135,GO:1901137,GO:1901264,GO:1901293,GO:1901360,GO:1901362,GO:1901505,GO:1901564,GO:1901566,GO:1901576,GO:1901679,GO:1901682,GO:1902559
EggNOG free text desc.UDP-galactose transmembrane transporter activity
EggNOG OGsCOG0697@1,KOG1581@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionUAA transporter
Ec32 orthologEc-11_000740.1
Exons8
Model size1456
Cds size1332
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig99.21176.1prot_S-ischiensis_contig99.21176.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig99 203761..210743 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817441.1026824-UTR-S-ischiensis_contig99:203716..2037601622817441.1026824-UTR-S-ischiensis_contig99:203716..203760Schizocladia ischiensis KU_0333UTRS-ischiensis_contig99 203717..203760 -
1695741118.4478347-UTR-S-ischiensis_contig99:203716..2037601695741118.4478347-UTR-S-ischiensis_contig99:203716..203760Schizocladia ischiensis KU_0333UTRS-ischiensis_contig99 203717..203760 -
1622817441.196733-UTR-S-ischiensis_contig99:210743..2107521622817441.196733-UTR-S-ischiensis_contig99:210743..210752Schizocladia ischiensis KU_0333UTRS-ischiensis_contig99 210744..210752 -
1695741118.5404022-UTR-S-ischiensis_contig99:210743..2107521695741118.5404022-UTR-S-ischiensis_contig99:210743..210752Schizocladia ischiensis KU_0333UTRS-ischiensis_contig99 210744..210752 -
1622817441.2110746-UTR-S-ischiensis_contig99:211824..2118951622817441.2110746-UTR-S-ischiensis_contig99:211824..211895Schizocladia ischiensis KU_0333UTRS-ischiensis_contig99 211825..211895 -
1695741118.5516417-UTR-S-ischiensis_contig99:211824..2118951695741118.5516417-UTR-S-ischiensis_contig99:211824..211895Schizocladia ischiensis KU_0333UTRS-ischiensis_contig99 211825..211895 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817441.1153932-CDS-S-ischiensis_contig99:203760..2039731622817441.1153932-CDS-S-ischiensis_contig99:203760..203973Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 203761..203973 -
1695741118.4599597-CDS-S-ischiensis_contig99:203760..2039731695741118.4599597-CDS-S-ischiensis_contig99:203760..203973Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 203761..203973 -
1622817441.1267083-CDS-S-ischiensis_contig99:204787..2050181622817441.1267083-CDS-S-ischiensis_contig99:204787..205018Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 204788..205018 -
1695741118.4714642-CDS-S-ischiensis_contig99:204787..2050181695741118.4714642-CDS-S-ischiensis_contig99:204787..205018Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 204788..205018 -
1622817441.1381032-CDS-S-ischiensis_contig99:205934..2060871622817441.1381032-CDS-S-ischiensis_contig99:205934..206087Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 205935..206087 -
1695741118.4820285-CDS-S-ischiensis_contig99:205934..2060871695741118.4820285-CDS-S-ischiensis_contig99:205934..206087Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 205935..206087 -
1622817441.149249-CDS-S-ischiensis_contig99:206475..2066011622817441.149249-CDS-S-ischiensis_contig99:206475..206601Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 206476..206601 -
1695741118.4918594-CDS-S-ischiensis_contig99:206475..2066011695741118.4918594-CDS-S-ischiensis_contig99:206475..206601Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 206476..206601 -
1622817441.1607845-CDS-S-ischiensis_contig99:207390..2076211622817441.1607845-CDS-S-ischiensis_contig99:207390..207621Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 207391..207621 -
1695741118.5023878-CDS-S-ischiensis_contig99:207390..2076211695741118.5023878-CDS-S-ischiensis_contig99:207390..207621Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 207391..207621 -
1622817441.1757114-CDS-S-ischiensis_contig99:209062..2091891622817441.1757114-CDS-S-ischiensis_contig99:209062..209189Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 209063..209189 -
1695741118.5155947-CDS-S-ischiensis_contig99:209062..2091891695741118.5155947-CDS-S-ischiensis_contig99:209062..209189Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 209063..209189 -
1622817441.1862457-CDS-S-ischiensis_contig99:210492..2107431622817441.1862457-CDS-S-ischiensis_contig99:210492..210743Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 210493..210743 -
1695741118.5283623-CDS-S-ischiensis_contig99:210492..2107431695741118.5283623-CDS-S-ischiensis_contig99:210492..210743Schizocladia ischiensis KU_0333CDSS-ischiensis_contig99 210493..210743 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig99.21176.1

>prot_S-ischiensis_contig99.21176.1 ID=prot_S-ischiensis_contig99.21176.1|Name=mRNA_S-ischiensis_contig99.21176.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=444bp
MEAAGAEHDAAALLYILATNFLLYVALVLITYLVVKLYIESSPDNPLFDE
EITYHRVPATHSGLELTSASVEAKAAGTPAAARRRRPSILDFEVAEPLMS
REEAMRKLIMFGVGLNVTFVIWGVLQERILKMEYGPGEFFTYSYGLVFTN
RFLGFVFSGVFMYYTKPKWSKALAYEYSFPAVSNMISSWCQYEALKYVTF
PTQMLSKSFKIVPIMVMGKILGNKEYPFYDYVVSGVISIGVTLFLKSSEG
LQLGIDMFGQTEGSGGIACGMMLLGLFLVFDSFTSQWQSRMFTKHKDLSP
IQMMFVMTAFSTIFSFVTLVHTNELVPFFSFVSDHPEIHLHFIAFGVCST
IGQLLIFHTIRSFGAVVFAIIMTVRIALSILVSCLIYDHPVTEMGLLGLL
IVFGAVGYRIKRRMEGKRLIKWEGMEDSKAPDLFHEWHEHLDF*
back to top

mRNA from alignment at S-ischiensis_contig99:203717..211895-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig99.21176.1 ID=mRNA_S-ischiensis_contig99.21176.1|Name=mRNA_S-ischiensis_contig99.21176.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8179bp|location=Sequence derived from alignment at S-ischiensis_contig99:203717..211895- (Schizocladia ischiensis KU_0333)
GTTCGGTGCTATCAGCCTGGCGAAGGGGGGGGACCAAGGGAAGGAACCGG GCTGACAAGCCCAGCCACGCTGTGAGTCGACGTGCTGCGAGCCTTGACCG CATTGCTTATGGTTGTTCTTGAAAACCAGCTTCGCCGGCACGCTTCCTCG CTCGATTCGCACTAGACGGGCCGGGAATGTTCTTGGGTGGCTTGCGGCAG CTGTTCCGCCACTGACTGCGCGTCCGAGTGGGAACTGACACTGATGCTAC CGCGGTTGGGTGACGGCCTGCTGGTTCTGTCGGACAAGGGGGGGTTCGCG AAAAGCGACGAGGATCGACCCGCCGCTGAGCCTATGTGCCTCATGCATTG GTTCAGGGTAGAGTCTGAACTGGCTGCGGGGGCCCTGACTCCGATGCCCG AGAAACTCTGCACTTGTTGGCATGCTTGGTCGTGCTTACCACGACCACGT GTTTACACATAACCTGTCCGCGCATGAGGGTGTCTTTATGTAGAGTAGCG AACGGCAGCAAGCGAGGCAGGGGCGATATGGTGGGAGCAGCACCCAAAGG GGGGGGCAGCCCTGAGGTTGCCTTTCACCCCCACCGCCGTTGACTCTGCA TCTGCCATCGCCACTCGCTCGCGACAGACCATCTCCAGTCGTATCAGCCG CGTCCTACCTATTTGGGCTGAATGTGTGCTTCCGTCCTTTTGCATGCTTG CGCTGGGCTGATGTTCACTCTGGTGTAGTGTAGTTTGACGTCACCTAACA TCAGTCTCGACGAGAACACTCGATTTCACACAGGCGAGACTGTACATAGC ACCTCGTTACAATTTGTGATGTGATGTGATATGATGTTCACTCTATTGTA CTGTAGTGTACAGTAGTTTGATTTGCACCTCGCCTGACGTTTTTAATCTT GATACGTACAAAAAACAACAGGGGCGAGAAATGGAGGCGGCGGGGGCGGA GCATGACGCCGCGGCCCTGCTCCACATCCTGGCCTGACGTTTATCTTGAT ATATATATATATATATGTACCCACGTGGTGCTTGCCGTAGTCCCGAGACC ATTGACCACGCAGTTTACCTTGATATTGTACGAAAAACAGGGGCGAGAAA CGGAGGCCTCACGTTTTATCTTGATACTTACAACAAACAACAGGGGCGAG AAATGGAGGCGGCGGGGGCAGAGCACGACGCCGCGGCCCTGCTCTACATC CTGGCCACCAACTTCCTGCTCTACGTGGCCCTTGTGCTCATCACATACTT GGTGGTGAAACTGTACATTGAGTCCTCACCGGACAACCCGCTGTTCGACG AAGAGATCACGTACCACCGCGTGCCGGCCACGCACAGCGGTCTGGAGCTG ACTTCGGCGTCGGTGGAGGCCAAGGCAGCCGGGACGCCCGCGGCAGCCCG CAGGCAAGTTCTTTGCCATTGATTCCCAACTGTACTATGCGTGGACATGG TCAGACCATTTGAGGACTACGACTGTAACTATGCTGTGTAGTTAGGTGAA AACTGCCGGCTTGTTCTCGAGAGGAGTAGCTACGAGAGGAGCAGCTACGC AGCCATTGACCCAACATGTGATGTGATGCGTGTGTGTGGTGTGTGTGTGT CTTGTGTGTGTGTGTGTGTGTGTGCGGGCGTGCGTGTGTGCTGACGTCGG CCTCGGTGGAGGCCAAGGCGGCCGGGGCGCCCGCGGCGGCCCGCAGGTCA GGCGTGTGATGTGATGTGATTTGATTTGCTTTGCACTGAAAAACACTGTA GTTTGACATCACATCACATGACATCATTGTGTCATCGGTGTGTGCGTGCG TGTGTGTGTGTGTGTGTGTTGTGTGTGTGTGTGCGTGCGTGTGTGTGAGA GAGAGAGTATGTCTGTGTGTTGTGTGTGTGTGTGTGTGACTATGTGTGTG TTGTGTGCGTGTGTGCGTGCGTGCTTGTGTGTGTGTGCATGCGTGCGCTT GTGTGTGTGCATGTGTGTGTGTGTGTGTGCGAGCGCGCGCGGGCGCTCGT GCACATAGCTGCTGGGCGTTCCGCCCGGTTTGAGCAGTTTTTCCCCATGC CGTTGGAACCTCAACTGGAGGCCTTCTTTCACTCACGGCCTGCTAGCTAC TCAAGTTCTTTACTAGACGAAATACCAGCCTGGTAACTACTTCGAAGCAC TTGACTAGACGGAATACCAGCCTACTACAACTGTAGCAACTACTTGAATA ACGAAATGCCACCCAGCTACCTACTTGAATAGCCGAAATGCCAGCCCACT AACACTTGACTCATAAAATACCTGCCTGCTAACTACTCGACTAGACAAAA ACCGGCCTGCTAGCTACTTGACGGGACTATATACCAGCCTGCCAAGTACT TGGACTAGTGCAGATGAAGAGCCAGCCTGGTGCCTACGTTGGGTCACCCC TGTGGGACGCGTGGTCGGTGGCCATATGGCTGCGGCACGCAGCTCATGAG TACACCCCCCGTCCCATTAGGAAAACCCCTGTGATGTTGATGTGATGTGA TGTGATGTCTAACTACAGTGAATTAGAGTGCACATCACATCACATCACAT CAAACCATTGCCGCATCCCCTGCCCGCAGACGCCGTCCAAGCATCCTGGA CTTTGAGGTGGCGGAGCCCCTCATGTGACGTGATGTCAAACTACAGTTTA TTAGAGTGCACATCACATCACATCACATCACATCATTTCGCATCCCCTGC CCGCAGACGCCGTCCAAGCATCCTGGACTTTGAGGTGGCGGAGCCCCTAA TGTCACGGGAGGAGGCCATGCGAAAGCTGATCATGTTCGGTGTGGGACTG AACGTCACCTTTGTCATATGGGGGGTTCTTCAGGTGAGCTAAGTTGGTTT ATAGGGCATGTCTGCAGAGCAGGAGAAGAACGGGAGAGAGTTGGGGAGGG TGAGTTTCCGCGTGCTCCTAAATAGTAGTTAGCAGATGAGTTTTGAGAAC ACCCCAAGTAGATATGGGCAGTGAGTTTCGAAATGCTTCTAGTAGTTTGC AGATGAGTTTCGAGAACACCCCAAGTAGCTATTGGCAGTGAGTTTCGACA TGCTCCTACTGTAGCAGTTAGCAGATGAGTTTCGAGAACACCCAAGTAGT TCATTGCAGTGAGTTTCGATATGCTCCCAGTAGCTAGCAGATGAGTTACG AGGACACCCAAGTAGTTCATGACAGTGAGTTTCGACATGCTCCTAGTAGT TAGCAGATGAGTGTCGAGAACACCCAAGTAGTTCATGGCAGTGAGTTTCG ACATGCTCCTAGTAGTTAGCAGATGAGTTTCGAGAACAACCAAGTAGTTC ATGGCAGTGAGTTGCGACGGGCTTCTACTTTCGTAGTTTAGCAGATGAGT TTCGAGAGCACCCTGAGTAGCTATTGGCAGTGAGTTTCGACATGCTTCTA GTTGGTAGTTGATGAGTCTCGAGCACACCCCAAGTAGTATCTCTTACTAT TGTTATAGTTTCTTTCTTCGCCGCATTGTGTACACTTTATGTATCTACTT CGAATTATAGAGGCAGTTTCTTTCATCATCACATTGCGCACGCTTCACAC AATTAACACCAAGCAATACAGTTTATCTCATCACCACACATATCGTGTAC ACCTTTTCCAATCCCCCACACCCCCCCCCCCCCCCCCCGCGGCAGGAACA CATCCTGCAGAGGGAGTACGGGCCCGGGGAAGTCTTCACGTATTCGTACG GGCTGGTTTTCACCAACCGCGTGCACACTTTACATAATTCCACTGCCAAG TATGGCAGTTCCTCATCACCACATCGTGTGCTTCCACTAGTACGCTTTTT CCAACCCACTGTTTTCGATCCCCGCGGCAGGAATGCATCCTGAAGATGGA GTACGGGCCCCGGGAGTTCTTCACGTACTCGCACGGGCTGATGTTCACCA ACCGCTTCTTCTACCACCAAGTATTACAGTTTCTCTCATATCGTGTACAC ATTTTCCAATACCCCCGGGCAGGAACGCATCCTGAAGCTGGAGTACGGGC CCGGGGAGTTCTTCACGTACTCGTACAGTTTCTCTCATCACCACATCGTG TGCACTTTTTCCAATCCCTTTGCTTCTTTCATCACATCGTACATACTTTG TCCAATCACCCTGCAGGAACGCATCCTGAAGATGGACTACGGGCCCGGGG AGTTCTTCACCTACTCACACGGGCTGGTGTTCACAAGCACACACATTACA TTGTTCCACCGCCAAGTACTTCGTATTACAGTTTCTCTCATCACCACATC GTGTACACTTTTTCCAATCGGCAGGAACGCATCCTGAAGATGGAGTACGG GCCCGGTGAATTCTTTACATACTCATACGGTCTGGTGTTCACCAACCGCT TCCTGGGGTTTGTCTTCTCGGGGGTGTTCATGTACTACACCAAGCCCAAG TGGTCCAAGGCCCTGGCATATGAGTACTCCTTCCCCGCGGTGTCCAACAT GATCAGCTCCTGGTGCCAGTACGAGGCGTTGAAGTACGTCACCTTCCCCA CGCAGGTCAGTCAGAACCAGTGATGGAATATCGAAGCAATTCGACCTATG TATTGACAGTACTGATCTAGACGCTCTGTTTTGAGTGGTAGATAAGCGGC GAGTTCCAGGCCCTGTGCCAAAAGACTCGTCCCGAAACGGGACTCAACGA AGCCCTTCTTCCCCTCGCAGGGCAAGAACACACAGAAAATAGAGAAGGAA AGGGGCGGGGTGATGAGGAAAGGGAAGAGGCGCAGGGAAGTCTCTTGTGC GCACAGTGGGGCAGGCGGGTGGGGCAGGCGGGGGTGAGCCGCACCCGAAC ACCGAGATCACGACATACCTGGGCGAGTGCGAGAAGAGAAGGCGTGAGCA AGTGCTGCAATGTGTACCGTGCACGAACCTCGTGACCACACCCCGAGAGC CAACCCAATAGCACAAAGCAAACGTCACAATGGCGTGGCCAGCACCAGAA GGACGCATACTGTACCCAACACCCGTGGCTACGCGATGTGGTCACGCGGT CGTGTGCAAAGGGGGTACGAGCCCACAGGAGAGCCGCCCAGGGAGAGTCG TCCAAAGAAACGCCAAGATAGTAGAACAGGCAGGAGACCCGACAAAGCCC GGAAACCTGGGGACGAGAAAAAGACGGGGCTTACAAATGCTCCCCCTTGC CAACTGTATTGATATTCGATATTCGATACTGTAGTTTGACCCACACTAAC TCCAAGTAGTTGCAGTAGTATTGCCACCCACAAAATCAGTCGAGCCCGAC AGCTATCTACTGATTGGTATTCTATCACTGCCTTCTCCTTGCAGATGCTC TCGAAGAGCTTCAAGATCGTGCCCATCATGGTGATGGGCAAGATACTGGG TAACAAGGAGTACCCCTTCTACGACTACGTCGTTTCCGGGGTCATCTCCA TAGGGGTCACACTCTTCCTGGTGAGGTTTGGGGGGGGGAGGAGGGGGGAA GCGTGGGGAGGGAGGGAGGGAGGGAGGGGGTAGGGAGGGAGGGAGGGAGG CAGGGAGGGAGGGAGGGAGGGGGTAGGGAGGGAGGGAGGGAAGGAGGGCG TGAGTGAGGGAGGGGGAGGGAGGGAGAGAGGGAGGGAGGGAGTGGGGGGG AGGGAGGGAGGGAGGGAGGAGAGAGATAGAGACAGAGAGGGGGGGCGCCC AGTCCCTGTAATTCGAACAACTCGTGCAAAACTTTTGCACCGGCCACCTG CCTGCCTGCCTGCTGATGTGATGGTGGCTGCCGCCGTTCGCCCCGCCCCC CCCCCCGCCTCCCCGGTGCCCTGCCCATCTCCCCCGGGCGCGTCTCTGAA CCAACAAGAAATCTTCCGAGGGGTTGCAACTGGGGATTGACATGTTTGGG CAGACGGAGGGCTCGGGCGGGATCGCCTGCGGCATGATGCTCCTGGGGCT GTTCCTGGTGTTTGATTCCTTCACCTCGCAGTGGCAGAGCCGCATGTTTA CCAAGCACAAGGTGAGTATGGGGAGGCGTGTGCGGGTGGCGATGGAAGCC GTTTGCAACAATGCCGATCCTGGTGTTTGACTCCTTCACCTCGCAGTGGC AGCGCCGCATATTTACCAAGCACAAGGTATGTGGAGGCGAGGGCGGCGAT AGAAGGCGTTTGCGGATATGCAGCTACGGTGAGTTTTGGTAGATGTGCAG AGGCATTACGTGGTCGCGGTTTCAAGCTTGAAGGCACAACGCCGTCAGAG GTGTGCACGCAGAAAACAGTAGATCTATTTCACTCTCCCGGAAAACCACT CCCTGCTGGGAGGCGCGTGCAGCGCCCAAGGTGTGTCACGGCGTCGGTGA AACGGAAGCGAAAGAAGGGCTCACGCATGTTGACAAAGCACAAGGTATGC AGAGGCGTGCACGGGCGGCGATCGGAGGCGTCTGCAAATAGTGTCGATGA AATGTATCAAGTACGCTGAAGAAGGGCTCACGCACGTGTACCCAGGGTTG GCACTTAACCACTACATATGTGGTGCCCTTTTAGGCCCTTAATTGGAGCT AATTAGGGGCCATTAGACCTAAAATGAAGGCTGATTAGGCACTAATTAAC CTCTAAGTGCCAACCATGCTCATTGTTCTTCTTCGTCGCAGGACCTGAGC CCCATCCAGATGATGTTTGTCTTCATTTAGAGGTGACTAGGGGAGACCTA GAATGCATGCTGATTAGGCCCTAGTGAACCCCTAAGTGCCACCAAACTTG CTCTCGTTGCCTTTCCGTTCTCCTTTGCAGGACCTGAGTCCCATCTAGAT GATGTTTGTCATGACCGCCTTCAGCACCATCTTCTCCTTCGTCACCCTCG TCAAATTAGGGAAATTATACCTAAAATGGAGGCTAATGAGGCCCTAATTA ACCCATAATCGCTGTTCTTCTGCGCAGGACCTGAGCCCCATCCAGATGAT GTTTGTCATGACGGCCTTCAGCACCATCTTCTCCTTTGTGACGCTGGTCC ACACCAACGAGCTGGTCCCCTTCTTTTCCTTCGTGTCCGACCACCCGGAG ATCCACCTCCACTTCATCGCCTTCGGCGTCTGCTCCACCATCGGGCAACT CCTCATCTTCCACACCATCCGGTCCTTCGGCGCGGTCGTCTTCGCCATCA TCATGACGGTGTGTACTCACGTCTCTGTGCATGCCCTGGACCCCAACGAT CCTCGTCTTTGCTCCTTCTCGTGGATCGCTGGCCAGCTGTAGCTTTCGCC ATTGGCCACGCGCCCTAGTGGGCGGAGCACGCCGGGTATTTCACTGACAG AACTTTTGGGTTGCACCATACCATCATGACGGTGCCTGCATGCATACCCA TGGCACAAATTTTAGTGGGATGTTTTTTTTTCGCCCAAATAGTTTTTTTG CAATACCTATCGAGTCATTTCGCCCAAATTGCGATCGAAGAACACCAGAG CCCAAATATCAGAAAAACAATGCCGAAGTATCGATGCCGAGCCGTGGAGT TTCCACACCTTGGAATGGCGTTTCGGCATCGAAGGCGCACCTAAAAACTT GCCCAACTGGAGTCGAAATCCGCCCGAAATCCATGGGGTTTCCACACCTT GGTACGGCGTTTCGGCATCGAAGGCCCACCCAAAAACTTACCTAACAATA TTTGTCGATATTTTCCAACCAAAGCATCGATTTGCTCGATCTGCTTGTGG CACCACCCAAATCGCCACTATTTTTTTGTTGACGTCGCGCTTTTGTGCCA GGGTTGCTTCGCGCTTTTTTCCATGGTTTTATAGGTGCGCATCGCGCTCA GCATCCTGGTGTCGTGCCTCATCTACAACCACCCCGTCACGGAGATGGGG CTGCTGGGCCTCCTCATCGTCTTCGGCGCCGTGGGGTAAATTAATTTTTG TTAAATTAAAATTACTTACCTGTAATTGCCGTTCTTTTATTAACGTCGCG CTATTGTGCCATGGTTCCATAGGTGCGCATCGCGCTCAGCATCCTGGTGT CATGCCTCATCTACGACCACCCCGTCACGGAGATGGGGCTGCTGGGGCTC CTCATTGTCTTCGGGGCCGTGGGGTACCGCATCAAGCGGCGCATGGAGGG AAAACGCCTCATCAAGTGGGAGGGGATGGAGGACTCCAAGGCGCCCGACC TCTTCCATGAGTGGCACGAACACCTCGACTTCTAAAATGAGGCGGGGAGA GGCGAACTTTTAATAGAGCAGGCTGGCGC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig99:203717..211895-

>mRNA_S-ischiensis_contig99.21176.1 ID=mRNA_S-ischiensis_contig99.21176.1|Name=mRNA_S-ischiensis_contig99.21176.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2664bp|location=Sequence derived from alignment at S-ischiensis_contig99:203717..211895- (Schizocladia ischiensis KU_0333)
ATGGAGGCGGCGGGGGCAGAGCACGACGCCGCGGCCCTGCTCTACATCCT
GGCCACCAACTTCCTGCTCTACGTGGCCCTTGTGCTCATCACATACTTGG
TGGTGAAACTGTACATTGAGTCCTCACCGGACAACCCGCTGTTCGACGAA
GAGATCACGTACCACCGCGTGCCGGCCACGCACAGCGGTCTGGAGCTGAC
TTCGGCGTCGGTGGAGGCCAAGGCAGCCGGGACGCCCGCGGCAGCCCGCA
GATGGAGGCGGCGGGGGCAGAGCACGACGCCGCGGCCCTGCTCTACATCC
TGGCCACCAACTTCCTGCTCTACGTGGCCCTTGTGCTCATCACATACTTG
GTGGTGAAACTGTACATTGAGTCCTCACCGGACAACCCGCTGTTCGACGA
AGAGATCACGTACCACCGCGTGCCGGCCACGCACAGCGGTCTGGAGCTGA
CTTCGGCGTCGGTGGAGGCCAAGGCAGCCGGGACGCCCGCGGCAGCCCGC
AGACGCCGTCCAAGCATCCTGGACTTTGAGGTGGCGGAGCCCCTAATGTC
ACGGGAGGAGGCCATGCGAAAGCTGATCATGTTCGGTGTGGGACTGAACG
TCACCTTTGTCATATGGGGGGTTCTTCAGACGCCGTCCAAGCATCCTGGA
CTTTGAGGTGGCGGAGCCCCTAATGTCACGGGAGGAGGCCATGCGAAAGC
TGATCATGTTCGGTGTGGGACTGAACGTCACCTTTGTCATATGGGGGGTT
CTTCAGGAACGCATCCTGAAGATGGAGTACGGGCCCGGTGAATTCTTTAC
ATACTCATACGGTCTGGTGTTCACCAACCGCTTCCTGGGGTTTGTCTTCT
CGGGGGTGTTCATGTACTACACCAAGCCCAAGTGGTCCAAGGCCCTGGCA
TATGAGTACTCCTTCCCCGCGGTGTCCAACATGATCAGCTCCTGGTGCCA
GTACGAGGCGTTGAAGTACGTCACCTTCCCCACGCAGGAACGCATCCTGA
AGATGGAGTACGGGCCCGGTGAATTCTTTACATACTCATACGGTCTGGTG
TTCACCAACCGCTTCCTGGGGTTTGTCTTCTCGGGGGTGTTCATGTACTA
CACCAAGCCCAAGTGGTCCAAGGCCCTGGCATATGAGTACTCCTTCCCCG
CGGTGTCCAACATGATCAGCTCCTGGTGCCAGTACGAGGCGTTGAAGTAC
GTCACCTTCCCCACGCAGATGCTCTCGAAGAGCTTCAAGATCGTGCCCAT
CATGGTGATGGGCAAGATACTGGGTAACAAGGAGTACCCCTTCTACGACT
ACGTCGTTTCCGGGGTCATCTCCATAGGGGTCACACTCTTCCTGATGCTC
TCGAAGAGCTTCAAGATCGTGCCCATCATGGTGATGGGCAAGATACTGGG
TAACAAGGAGTACCCCTTCTACGACTACGTCGTTTCCGGGGTCATCTCCA
TAGGGGTCACACTCTTCCTGAAATCTTCCGAGGGGTTGCAACTGGGGATT
GACATGTTTGGGCAGACGGAGGGCTCGGGCGGGATCGCCTGCGGCATGAT
GCTCCTGGGGCTGTTCCTGGTGTTTGATTCCTTCACCTCGCAGTGGCAGA
GCCGCATGTTTACCAAGCACAAGAAATCTTCCGAGGGGTTGCAACTGGGG
ATTGACATGTTTGGGCAGACGGAGGGCTCGGGCGGGATCGCCTGCGGCAT
GATGCTCCTGGGGCTGTTCCTGGTGTTTGATTCCTTCACCTCGCAGTGGC
AGAGCCGCATGTTTACCAAGCACAAGGACCTGAGCCCCATCCAGATGATG
TTTGTCATGACGGCCTTCAGCACCATCTTCTCCTTTGTGACGCTGGTCCA
CACCAACGAGCTGGTCCCCTTCTTTTCCTTCGTGTCCGACCACCCGGAGA
TCCACCTCCACTTCATCGCCTTCGGCGTCTGCTCCACCATCGGGCAACTC
CTCATCTTCCACACCATCCGGTCCTTCGGCGCGGTCGTCTTCGCCATCAT
CATGACGGACCTGAGCCCCATCCAGATGATGTTTGTCATGACGGCCTTCA
GCACCATCTTCTCCTTTGTGACGCTGGTCCACACCAACGAGCTGGTCCCC
TTCTTTTCCTTCGTGTCCGACCACCCGGAGATCCACCTCCACTTCATCGC
CTTCGGCGTCTGCTCCACCATCGGGCAACTCCTCATCTTCCACACCATCC
GGTCCTTCGGCGCGGTCGTCTTCGCCATCATCATGACGGTGCGCATCGCG
CTCAGCATCCTGGTGTCATGCCTCATCTACGACCACCCCGTCACGGAGAT
GGGGCTGCTGGGGCTCCTCATTGTCTTCGGGGCCGTGGGGTACCGCATCA
AGCGGCGCATGGAGGGAAAACGCCTCATCAAGTGGGAGGGGATGGAGGAC
TCCAAGGCGCCCGACCTCTTCCATGAGTGGCACGAACACCTCGACTTCTA
AGTGCGCATCGCGCTCAGCATCCTGGTGTCATGCCTCATCTACGACCACC
CCGTCACGGAGATGGGGCTGCTGGGGCTCCTCATTGTCTTCGGGGCCGTG
GGGTACCGCATCAAGCGGCGCATGGAGGGAAAACGCCTCATCAAGTGGGA
GGGGATGGAGGACTCCAAGGCGCCCGACCTCTTCCATGAGTGGCACGAAC
ACCTCGACTTCTAA
back to top