mRNA_S-ischiensis_contig93.20962.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A832BEU9_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A832BEU9_9DELT) HSP 1 Score: 240 bits (613), Expect = 1.250e-71 Identity = 130/233 (55.79%), Postives = 158/233 (67.81%), Query Frame = 3
Query: 345 PAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVNLQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYGVDD--EDPAT---FCHDPTDKGFSVIIKDYDL 1028
P PG SWQWQ+ G+ T + MYD+DLF+VS++ ++ LK G VICYFSAGS EEWR D ADFPE A+G LDGWPGERWLD+ VR V A RLDLA ++GCDGVEPDNV Y + G+ ++ QLDYN+WLA QAHARGLSVGLKN L QL L FD+A+NE C Y+EC+ LT F+ GKAV+ AY VDD + PA C GFS +IK++DL
Sbjct: 162 PVPGVSWQWQIDGEAIDTSIDVD-MYDVDLFEVSDAELSTLKTDGRVVICYFSAGSYEEWRPDAADFPEEALGTPLDGWPGERWLDIRDPGVRKVQAARLDLAEARGCDGVEPDNVDGYANNN-GLGLTGRDQLDYNLWLAAQAHARGLSVGLKNDLDQLDALVSAFDWALNEECAAYDECE-VLTPFIDSGKAVFNVAY-VDDIADGPALADEVCAAALGLGFSTLIKEWDL 390
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE) HSP 1 Score: 233 bits (594), Expect = 5.630e-71 Identity = 123/235 (52.34%), Postives = 155/235 (65.96%), Query Frame = 3
Query: 345 PAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVNLQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYGVDDEDPATFCHDPTDKGFSVIIKDYDLDDRVCSC 1049
PAPG +WQWQL G ++ +L AMYDIDLF+ +T+ L+ G VICYFSAGS+E+WR+D + FP A+G+ LDGWPGERWLD VRDVM RLDLA K CDGVEPDNV Y +G+G ++A QLDYN +LA +AHARGLS+GLKN L Q+ L +FD+A+NE C Y+EC+ LT F+ GKAV+ Y + A C D G S +IK DLD +C
Sbjct: 2 PAPGTTWQWQLTGTIDTSLDV--AMYDIDLFEAPQATIDALRAAGKKVICYFSAGSSEDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDGYT-NGSGFPLTAATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGHFDWALNEECHAYDECE-MLTPFIRAGKAVFHAEYVAASQANAV-CADTKPLGLSTLIKRLDLDAWRVAC 231
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: UPI0019B2C5C6 (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=UPI0019B2C5C6) HSP 1 Score: 234 bits (596), Expect = 1.510e-69 Identity = 120/235 (51.06%), Postives = 150/235 (63.83%), Query Frame = 3
Query: 333 ERFQPAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVN-LQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYGVDDEDPATFCHDPTDKGFSVIIKDYDLDD 1034
+ +QPAPG +WQWQL D+N + + MYDIDLFD + + L G VICYFSAGS E WR D ADFPE +GD LD WPGERWLD++ L+ ++ +M RL+LA+ K CDGVEPDNV Y + TG ++ QL YN WLA AH+ GLS+GLKN L Q+ L FD+A+NE C YNECD L F+ GKAV+ Y + DPA +C GFS + K YDL D
Sbjct: 121 QHWQPAPGTTWQWQLTEDINTSYDVM--MYDIDLFDAPQAVIDTLHADGRIVICYFSAGSYENWRPDAADFPEAVLGDPLDDWPGERWLDISQLELLQPIMLARLELASQKNCDGVEPDNVDGYT-NTTGFALTDAHQLAYNTWLATAAHSLGLSIGLKNDLDQIPDLVDVFDWALNEQCFQYNECDT-LLPFIEAGKAVFGVEYSEEGGDPADYCPLANAAGFSWLTKTYDLGD 351
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A2Z4FN32_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Bradymonas sediminis TaxID=1548548 RepID=A0A2Z4FN32_9DELT) HSP 1 Score: 232 bits (592), Expect = 1.990e-69 Identity = 123/251 (49.00%), Postives = 161/251 (64.14%), Query Frame = 3
Query: 309 HPLYSHAQERFQPAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVNLQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAV----YVCAYGVDDEDPATFCHDPTDKGFSVIIKDYDLDDRVCSC 1049
H + +++ +QPAP +W WQLQG+V+ TL A+YDIDLFD +T+A L+ G VICYFSAGS E+WR D F + GD + WPGE W+D+ +R++M RLDLAASKGCD VEPDNV Y ++ TG+++S QLDYN +LA+QAH RGLS+GLKNAL + LEP FD+A+NESCL Y+EC L F+ GKAV Y+ A A C D + GFS +I ++LD C
Sbjct: 77 HQADAESRDFWQPAPNTTWHWQLQGEVDTTLDV--AVYDIDLFDTPAATVAALQARGVRVICYFSAGSYEDWREDAERFEASDYGDPMGNWPGEWWVDIRSDNLREIMQARLDLAASKGCDAVEPDNVDAY-QNATGLDLSQADQLDYNRFLARQAHQRGLSIGLKNALDLVATLEPDFDWALNESCLSYDEC-AMLRPFIDAGKAVFHAEYIDAVSEASAKQAEVCGDASIGGFSTLIFTWELDGWAVGC 323
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: UPI001656DE63 (endo alpha-1,4 polygalactosaminidase n=1 Tax=Nitrosophilus labii TaxID=2706014 RepID=UPI001656DE63) HSP 1 Score: 230 bits (587), Expect = 2.050e-69 Identity = 115/236 (48.73%), Postives = 155/236 (65.68%), Query Frame = 3
Query: 339 FQPAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVNLQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAV----YVCAYGVDDEDPATFCHDPTDKGFSVIIKDYDLDD 1034
++P +W WQLQG +N+ + +YDIDLFD S + L + G VICYFSAGS E WR D FP+ A+G+DLDGW GE+WLD+ VR++M RLD+A +KGCDGVEPDNV Y+ + TG ++ + QL+YN +LAQ+AH RGLS+GLKN L+Q+ L YFDFA+NE C +NEC+ +LT F+ GK V Y Y +D+++ A C D+ F +I DLDD
Sbjct: 31 YRPDVNTTWHWQLQGTINLDYNV--ELYDIDLFDTSEEIIETLHNQGKKVICYFSAGSYENWREDAYKFPKEAIGNDLDGWEGEKWLDIRNSTVREIMQERLDIAKNKGCDGVEPDNVDSYINN-TGFGLTYEDQLEYNKFLAQEAHLRGLSIGLKNDLMQINDLVDYFDFALNEQCHEFNECE-FLTPFIQKGKPVFNVEYAQIYVIDEQERAKLCQKARDENFRTLILPKDLDD 262
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A2D5PFC3_9GAMM (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Oceanospirillaceae bacterium TaxID=1899355 RepID=A0A2D5PFC3_9GAMM) HSP 1 Score: 230 bits (587), Expect = 2.630e-69 Identity = 120/237 (50.63%), Postives = 151/237 (63.71%), Query Frame = 3
Query: 339 FQPAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVNLQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYGVDDEDPA---TFCHDPTDKGFSVIIKDYDLDDRV 1040
+QPAPG SWQWQL GD+N +YDIDLFD S T+A L+ G VICYFSAGS E WR D +F + +G +LDGW GERWLD+ VRD+M RLD+A +KGCDGVEPDN+ Y + GV +SA QL YN ++A +AH RGL+V LKN L Q+ L YFDFA+NE C Y+ECD L F+ GKAV Y + +D A + C++ FS ++ DLDD V
Sbjct: 38 YQPAPGVSWQWQLSGDLNTGYDV--EIYDIDLFDNSAETIAELQQQGRKVICYFSAGSYENWRDDAGEFEASDLGSNLDGWEGERWLDIRSDNVRDIMTARLDIAQNKGCDGVEPDNMDGYA-NTNGVGLSASDQLSYNRFIADEAHKRGLAVALKNDLDQVAALVDYFDFAVNEQCAEYDECDR-LNPFIEAGKAVLQAEYASEYQDAAGLTSLCNEMAGSEFSTLVLPLDLDDSV 270
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A2S9Y4F7_9DELT (Glyco_hydro_114 domain-containing protein n=1 Tax=Enhygromyxa salina TaxID=215803 RepID=A0A2S9Y4F7_9DELT) HSP 1 Score: 231 bits (590), Expect = 6.010e-69 Identity = 128/233 (54.94%), Postives = 154/233 (66.09%), Query Frame = 3
Query: 345 PAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVNLQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYGVDDED-PA---TFCHDPTDKGFSVIIKDYDLD 1031
P PG SWQWQL G+++ T +YDIDLFD +T+A L D G AVICYFSAGS E+WR D FP A+GD LDGWPGERWLD+ VR +M RLDLA S GCD VEPDNV + + TG ++SAD QLDYN +LA +AHARGLS+GLKN L Q+ L FD+A+NE C+ Y+EC+ L FL GKAV+ Y D D PA T C GFS +IK +DLD
Sbjct: 104 PTPGTSWQWQLSGNLDTTFDV--EVYDIDLFDTPPATIASLHDDGRAVICYFSAGSHEDWRPDADQFPPAAIGDPLDGWPGERWLDIRDAEVRALMQARLDLAQSAGCDAVEPDNVDGWT-NPTGFDLSADDQLDYNAFLAAEAHARGLSIGLKNDLDQVDALVDQFDWALNEECIAYDECE-LLQPFLDAGKAVFHVEYVDDPADGPAAADTVCGQ-VPAGFSTLIKLWDLD 331
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A7C2TI21_9CHLR (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C2TI21_9CHLR) HSP 1 Score: 229 bits (583), Expect = 1.010e-68 Identity = 130/264 (49.24%), Postives = 158/264 (59.85%), Query Frame = 3
Query: 276 VQAMLVAWIAAHPLYS-----HAQERFQPAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVN-LQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYGVDDEDPATFCHDPTDKGFSVIIKDYDLDDRVCSC 1049
V + AW A LY +A++ +QP PG SWQWQL G V T MYDIDLFDV S + L G VICYFSAGS EEWR D FP + +G L+GWP ERWLD+ L + +M RLD A +KGCDGVEPDNV Y + TG +++ QLDYN WLA QAHARGLSVGLKN + Q+ QL P FD+A+NE C YNEC L F+ GKAV+ Y ++ PA FC F + K ++LD SC
Sbjct: 19 VPVRVTAWRATPILYLPYIGYNAKDHWQPRPGTSWQWQLTGTVVTTFDV--NMYDIDLFDVPRSVIDELHADGRVVICYFSAGSWEEWRPDARQFPPSLLGKPLEGWPDERWLDIRRLDLLGPLMEARLDRAVNKGCDGVEPDNVDGYA-NDTGFKLTFQDQLDYNRWLAAQAHARGLSVGLKNDMDQVTQLLPAFDWALNEQCFQYNECH-LLVPFVQAGKAVFGVEYELE---PAEFCLQAIAMNFDWLRKKWELDAWRRSC 275
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A3M1KHQ5_9BACT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A3M1KHQ5_9BACT) HSP 1 Score: 228 bits (582), Expect = 1.110e-68 Identity = 122/233 (52.36%), Postives = 150/233 (64.38%), Query Frame = 3
Query: 348 APGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVNLQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYG---VDDEDPATFCHDPTDKGFSVIIKDYDLDDR 1037
A G SW WQL GD++ + +YDIDLFD +T+A L+D G AVICYFSAGS E WR D FP A+G+ LDGW GERWLD+ A+R ++ RLDLA SKGCD VEPDNV + TG +SAD QL +N WLAQQAHARGL VGLKN L Q+ LE FDFAINE CL ++EC Y F+A GKAV+ Y +++++ C P G S +I +LD R
Sbjct: 35 ATGASWYWQLNGDLHSDVQA--QVYDIDLFDTPATTIAALRDRGIAVICYFSAGSYENWRPDADAFPADALGEPLDGWEGERWLDIRDNALRPILEQRLDLAVSKGCDAVEPDNVDGWTNR-TGFPLSADDQLAFNRWLAQQAHARGLLVGLKNDLDQIGALEAAFDFAINEQCLAFDECSAY-APFVAAGKAVFHAEYPGHPLNEKELQAICTRPERTGLSTLIAPLNLDGR 263
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Match: A0A1F8R4I6_9CHLR (Glyco_hydro_114 domain-containing protein n=1 Tax=Chloroflexi bacterium RBG_16_58_14 TaxID=1797654 RepID=A0A1F8R4I6_9CHLR) HSP 1 Score: 229 bits (584), Expect = 1.180e-68 Identity = 122/241 (50.62%), Postives = 150/241 (62.24%), Query Frame = 3
Query: 312 PLYSHAQERFQPAPGGSWQWQLQGDVNVTLSPLPAMYDIDLFDVSNSTMALLKDGGAAVICYFSAGSAEEWRADYADFPETAMGDDLDGWPGERWLDVN-LQAVRDVMAGRLDLAASKGCDGVEPDNVQVYLEHGTGVEVSADQQLDYNIWLAQQAHARGLSVGLKNALLQLVQLEPYFDFAINESCLYYNECDGYLTTFLAVGKAVYVCAYGVDDEDPATFCHDPTDKGFSVIIKDYDLD 1031
P + + + +QPAP SWQWQL G ++ +L MYDIDLF+ + L G VICYFSAGS E+WR D ADFP +GD L+GWPGE+WLD L + +M RLDLA KGCDGVEPDNV Y TG +S Q+ YN WLAQQAHARGLS+GLKN L Q+ L P FD+A+NE C YNECD L F+ KAV+ Y ++ PA FC FS + K++DLD
Sbjct: 50 PTPTQSADWWQPAPDTSWQWQLSGTIDTSLDV--QMYDIDLFEAPQEAIDTLHSDGRVVICYFSAGSWEDWRPDAADFPAEVIGDPLEGWPGEKWLDTRRLDLLGPIMQARLDLAVQKGCDGVEPDNVDGYANQ-TGFPLSYADQIAYNTWLAQQAHARGLSIGLKNDLDQIGDLLPLFDWALNEECFTYNECD-LLLPFIESHKAVFGVEYELE---PADFCPQANAMHFSFLKKNWDLD 283 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig93.20962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig93.20962.1 >prot_S-ischiensis_contig93.20962.1 ID=prot_S-ischiensis_contig93.20962.1|Name=mRNA_S-ischiensis_contig93.20962.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=367bp MPLRRSTRTNVQAMLVAWIAAHPLYSHAQERFQPAPGGSWQWQLQGDVNVback to top mRNA from alignment at S-ischiensis_contig93:72927..80510+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig93.20962.1 ID=mRNA_S-ischiensis_contig93.20962.1|Name=mRNA_S-ischiensis_contig93.20962.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7584bp|location=Sequence derived from alignment at S-ischiensis_contig93:72927..80510+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig93:72927..80510+ >mRNA_S-ischiensis_contig93.20962.1 ID=mRNA_S-ischiensis_contig93.20962.1|Name=mRNA_S-ischiensis_contig93.20962.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2202bp|location=Sequence derived from alignment at S-ischiensis_contig93:72927..80510+ (Schizocladia ischiensis KU_0333)back to top |