mRNA_S-ischiensis_contig91.20925.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: D7FJR5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJR5_ECTSI) HSP 1 Score: 145 bits (367), Expect = 8.090e-36 Identity = 87/179 (48.60%), Postives = 128/179 (71.51%), Query Frame = 1
Query: 307 ARVQTVNERLLAELRQAIEEAPE--VVP-EGAARFEREEVDLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGELDPSPQAANGARAA----EDEDDAKLLESTDELLLRTEQELQEEIGR 822
A++QTVN RLLA+ IEE + V+P E + + +R+E DLNGV+PF A+LG+ GAAAMSF +WKAT +LA+AY + A + D+ V R+T F+KQ +GL +LG GIFGVT+LG+ ++ A VA+GVAKGELDPSP+A+ +AA E+E + +L+ DE L + ++E++ +G+
Sbjct: 90 AKLQTVNARLLAQ----IEEQGKGIVIPTEESKKIKRKEEDLNGVNPFYAILGAGGAAAMSFGSWKATLWLAQAYYSKPAEESDILAVARMTSFIKQAVVGLFALGAGIFGVTALGMGVMAAIVAVGVAKGELDPSPEASGSKKAAPGASEEEKELLMLQQADESLRKAQEEIERNVGK 264
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A835ZBJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBJ7_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.360e-28 Identity = 86/183 (46.99%), Postives = 112/183 (61.20%), Query Frame = 1
Query: 316 QTVNERLLAELRQAIEEAPEVVPEGAARF--EREEVDLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEAN--QPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGELDPSP--QAANGARAAEDEDDAKL--LESTDELLLRTEQELQEEIGRAGRSRE 840
Q+VN RLL E+ ++ + V EGA R EREEVDLNGV P A LGS GA AMS AW+ TN LA Y Q D+ VQRLTG MKQV +GLG+L TG+FGVT+LG+ LLG +V MGV GELDPS + A+ +R A+ LE +LL + + E+ ++ +A R ++
Sbjct: 56 QSVNARLLEEINSSMPKYR--VLEGATRLSVEREEVDLNGVQPLMAFLGSVGAGAMSAGAWRLTNVLAGIYLVQSEKFANSDILAVQRLTGLMKQVIVGLGTLATGVFGVTALGMALLGGRVLMGVVSGELDPSKVDEKASSSRGRGPAPTAQEGELEDVKQLLAKADAEIAAQLQQARRQKQ 236
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A7S1UHH8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHH8_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.080e-22 Identity = 55/104 (52.88%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 385 EGAARFEREEVDLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGEL 696
E +FER EVDLNG +P QA LG+ A +S AW+ T F +AYA+ + D Y+ RL+G MKQV +GLGSL TG+FGV +LGL LLGA++A+G+++GEL
Sbjct: 52 EVTGKFERVEVDLNGTNPLQAFLGAGLAGLLSTVAWRFTTFSIDAYAKATPTESDFYLTNRLSGVMKQVVVGLGSLATGVFGVIALGLGLLGARIAVGISRGEL 155
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A1Z5JL82_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JL82_FISSO) HSP 1 Score: 85.1 bits (209), Expect = 9.250e-15 Identity = 61/151 (40.40%), Postives = 81/151 (53.64%), Query Frame = 1
Query: 304 AARVQTVNERLLAELRQAIEE----APEVVPEGAARFEREEVD------------LNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGELDPSP 708
AA+ TVNERL+ EL++A ++ A + F ++ D LNGV+P +G A A +F W T AE +A N D YVV+RL + V +G+ SL TG FGVT LG+ LLG +VA GVA GELDP+P
Sbjct: 66 AAQTGTVNERLMQELQEAKQKEKFGARSKFSKNFDGFRSQKTDEEREAAIAAARNLNGVNPVVTTIGGVLALAAAFGLWTLTTTAAEFFASHPVNS-DFYVVERLAAVFRNVVMGIISLATGFFGVTGLGIFLLGVRVAYGVATGELDPTP 215
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A7S2R2C6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2C6_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 9.250e-15 Identity = 46/97 (47.42%), Postives = 61/97 (62.89%), Query Frame = 1
Query: 418 DLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGELDPSP 708
+LNG++P + GS AAA+S W AT +LAE +A D Y VQR+ G + +G+ SL +G FGVT LG+ LLG +VA GV GELDP+P
Sbjct: 34 NLNGINPLICIGGSIFAAAVSAGLWIATGYLAEMFASHPVTT-DFYTVQRIAGVFRNAVMGIVSLASGFFGVTGLGIFLLGLRVAQGVLTGELDPTP 129
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A7S1Y8S6_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y8S6_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.530e-14 Identity = 62/162 (38.27%), Postives = 82/162 (50.62%), Query Frame = 1
Query: 280 EKSAAQPPAARVQTVNERLLAELRQAIEEAPEVVPE---------GAARFEREEV----------DLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGELDPSP 708
E S+ P A T+NERL ELRQ E+ + + G ER E DLNGV+P A+ G A +++ W T+ LA +A + D Y +QR G + V +GL SL G FGVT +G+LLLG +V GVA GELDP+P
Sbjct: 65 EPSSTAPTGAATGTINERLKRELRQIEEDNAQGMRSPLGEKLRKLGFMSKERTEAEREASIAEARDLNGVNPLIAIGGGLFALSVAGGVWWMTSQLATFFAMHPVSDSDFYAIQRSQGVFRNVVMGLASLAAGFFGVTGIGILLLGIRVGFGVATGELDPTP 226
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A7S4B5P2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B5P2_CHRCT) HSP 1 Score: 81.3 bits (199), Expect = 2.490e-13 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 1
Query: 325 NERLLAELRQAIEEAPEVVPEGAARFEREEVDLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGELDPS 705
NE LLAE++ + E PE + VDLNG+ P V+G+ A + AW+ T +A A + YVV RLTG + V + +G+LG G+ G+ S+G L QVA+GV KGELDP+
Sbjct: 119 NEALLAEIQALMPPTAEPAPE------KMPVDLNGIRPRDLVIGALSYAVVCVLAWQFTIAAGTYFAEHPAEESSFYVVNRLTGLARVVVVSMGALGAGVTGIASVGQAALAVQVAIGVMKGELDPT 239
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A7S0PJP3_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PJP3_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 3.580e-9 Identity = 54/153 (35.29%), Postives = 79/153 (51.63%), Query Frame = 1
Query: 307 ARVQTVNERLLAELRQA--IEEAPEV-----------------VPEGAARFEREEVDLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGELDPSP 708
A+V T+NERLL+E++++ ++ P+ E + E +LNGV+P A+ S A A + W T +LA +A D+Y +QRL + +GL SL +G FGVT +GL LLG +V GV GELDP+P
Sbjct: 104 AKVNTINERLLSEIKKSEDLQNNPKTKTGKKTKEIFSAFKSQKTEEERQKAIEEAQNLNGVNPTVALGASFVAFAGAGILWYITGYLAALFATHPITT-DIYSLQRLFAVFRNAVMGLVSLASGFFGVTGMGLFLLGLRVTYGVMTGELDPTP 255
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: F0YIT9_AURAN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIT9_AURAN) HSP 1 Score: 70.5 bits (171), Expect = 1.000e-8 Identity = 58/183 (31.69%), Postives = 93/183 (50.82%), Query Frame = 1
Query: 157 RVVCHSVLKSFTLKRRVCMSSTPDGNVSEAQA------RAGSESDMSEKSAAQPPAARVQTVNERLLAELRQAIE----EAPEVVPEGAARFEREEVDLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAM 675
R VC + F +R V + + D R G+ + E AA AAR+ TVN +LLA++ ++ EAP+V ERE+VD++ VSP +AVL A ++ W F ++A+ + + + Y + R++ M+ V +G G+L TGI G +GL+ LGA+VA+
Sbjct: 1980 RCVCRFIFTKFWFRRFVLSALSDDAKPDVIDEFFPRFRRDGAAAAADESPAAPTGAARMNTVNAKLLADIEKSKSQFRVEAPQVE-------EREDVDVSDVSPVRAVLSGVAALGAAYVFWLGVGFTSDAFDAKPL-ESEFYPIMRISMIMRTVVLGAGTLLTGITGFAGVGLIALGAKVAV 2154
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Match: A0A2V3IZV8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZV8_9FLOR) HSP 1 Score: 67.8 bits (164), Expect = 1.020e-8 Identity = 46/127 (36.22%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 316 QTVNERLLAELRQAIEE-APEVVPEGAARFEREEVDLNGVSPFQAVLGSAGAAAMSFAAWKATNFLAEAYARQEANQPDLYVVQRLTGFMKQVTIGLGSLGTGIFGVTSLGLLLLGAQVAMGVAKGE 693
QT N+R+L ++R ++ E P+ + +D++ V+PF ++G+ GAA +S+A W A ++A +A + +YVVQRL+ ++ + L +LG+GI GVTSLGL LL + A G GE
Sbjct: 138 QTPNKRVLQQVRDTMQRLGVEEHPQTPSPRPFSPIDISSVNPFSPLVGAFGAAFISYAVWSALGYIAFFFASHPLDD-QIYVVQRLSAVVRTGLVCLFALGSGISGVTSLGLFLLFGRTAYGTLSGE 263 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig91.20925.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig91.20925.1 >prot_S-ischiensis_contig91.20925.1 ID=prot_S-ischiensis_contig91.20925.1|Name=mRNA_S-ischiensis_contig91.20925.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=211bp MSSTPDGNVSEAQARAGSESDMSEKSAAQPPAARVQTVNERLLAELRQAIback to top mRNA from alignment at S-ischiensis_contig91:457056..464342- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig91.20925.1 ID=mRNA_S-ischiensis_contig91.20925.1|Name=mRNA_S-ischiensis_contig91.20925.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7287bp|location=Sequence derived from alignment at S-ischiensis_contig91:457056..464342- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig91:457056..464342- >mRNA_S-ischiensis_contig91.20925.1 ID=mRNA_S-ischiensis_contig91.20925.1|Name=mRNA_S-ischiensis_contig91.20925.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1266bp|location=Sequence derived from alignment at S-ischiensis_contig91:457056..464342- (Schizocladia ischiensis KU_0333)back to top |