|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 269 |
| Cds size | 267 |
| Stop | 0 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817412.2469864-CDS-S-ischiensis_contig91:331359..331490 | 1622817412.2469864-CDS-S-ischiensis_contig91:331359..331490 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig91 331360..331490 + |
| 1695741095.5457144-CDS-S-ischiensis_contig91:331359..331490 | 1695741095.5457144-CDS-S-ischiensis_contig91:331359..331490 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig91 331360..331490 + |
| 1622817412.2597044-CDS-S-ischiensis_contig91:333595..333731 | 1622817412.2597044-CDS-S-ischiensis_contig91:333595..333731 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig91 333596..333731 + |
| 1695741095.5565717-CDS-S-ischiensis_contig91:333595..333731 | 1695741095.5565717-CDS-S-ischiensis_contig91:333595..333731 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig91 333596..333731 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig91.20916.1 >prot_S-ischiensis_contig91.20916.1 ID=prot_S-ischiensis_contig91.20916.1|Name=mRNA_S-ischiensis_contig91.20916.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=89bp
AAPPAGGGGGAGARDHSTAVGAGVGGVADGGADVPDRERQRRNSRRADPL
PNGEGPYDDLAHHQRRGARRASRGSPTSAAAAAAEEGLQ back to topmRNA from alignment at S-ischiensis_contig91:331360..333732+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig91.20916.1 ID=mRNA_S-ischiensis_contig91.20916.1|Name=mRNA_S-ischiensis_contig91.20916.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2373bp|location=Sequence derived from alignment at S-ischiensis_contig91:331360..333732+ (Schizocladia ischiensis KU_0333)
GCGGCGCCGCCGGCAGGTGGAGGAGGAGGGGCCGGTGCCCGGGACCATTC
TACTGCCGTAGGGGCAGGCGTGGGTGGTGTGGCCGACGGCGGAGCAGATG
TGCCCGACCGGGAGAGACAGAGGAGGAACAGGTGATTGACTGTAACCGTT
GTCTGCTGAGCGGCCATGTACACTATTGTGGGATAGGTTAAGATAGGTCA
AGTGTCCCGTCGTCCTCCAAGAGTTGACTGTAAGTCCCTTCTGGCATTGA
GGCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCCCCTCCCCCCCTCCCCCC
CCCCCCCCCTCTCTCCCCCCGCCCCCCCCCCCCCCCCCCCCTCTCTCTCT
CTCTCTCTCTCTCTCTCCCTTCCTTCCTCCCTCCCTCCCTCTCGTTCCCC
CCCCACCTCCCTCCCTCTCTCGCTCGTCCCCCGCCTCTCTCCCTCTTGCA
TGCACCGAGCGTGCCCCCGCTCGGGTGTGTGGGCCGGGCCAGGTGTCCCA
AATAACAATGCCACAATGAAAAGGCGCTGTGTCCCTTGCGCATGGCGTCT
TTTGTTTGTTTGTGTCCCCTGCGAGTGGAAGCAGGGTTCACTTAACTTAT
CTGGTGAGGTACCAGTTTCGATGTGATGTGATGTGATGTGGTGCCACACT
ACAGCATACTAAAGTGCGCGCCATATCACATCGCGTCACACTTTCCCCCT
TGCGCATGGCGTGTTTTGTTTGTTTGTGTCCCGCGAGTGGAAGGAGGTTT
AACTTCTATGGTGAGGTCCAATTTTCGATGTGATGTGATTTGATGTGGTG
CTACACTACAGCGTACTAGAGCGCACGCCGTGTCACATCACATCACATCA
CATCACATCACATCACGTCACCCTAGGGCTAACTCTTCCGGTGAGGTCCC
CACCGTAGTTGTTGGGACGGTGCCCGGAAATCACCAGTCCACCAACCCCA
GCAACAAATGCGCGAGGAGGGGCAAGCACATTTTACTGCCAGCATATCCG
CGTGCCCCCCCGCCCCCCCCTGCGAGCAATTGGCCGCCATTTTTTTTTCC
CGACCGACGTGTGGGGATTTCGCACGGACCAGTCAGTCCTCTCATCTCCT
GTCGAGAACATCCGCAGTCTCAAGGGTGGGATGGCAGGTTGTGCGACTCA
ATACGGCGTGTACTCTGTTGCCCAAAGATGGGGATTGTTCAGGCCCAGGG
CATGCACAGAGACGAGGAAACTCGTCCGAACATGAGTACACGCATCCTTA
TCGCGCTGTACTGCAGTTTGAGGTGGCCAACGCAGCCGTGTGATGCGGCT
CTCCATGCAGCGTGCGCTCCCAAAAGTGCTGCACTGCAGTTTTTGAGATG
GCATCAATCGCATGGCATGCAACGCAGGCAACGTGACGCGACACGATACG
ACTAGCACACACTCCAGCGCGCTGTATGAGTACCACAGTCGTCGGAGAGA
TTTTGCCCCCACGGGACAATTTTGGGGGGGAGCATTTCTAGCCGGGAAGG
TCCTGAATTGTCCCGAAAACTCTCGGAAAGTTCCCCCAGGTCCTGGGGGA
GATTTTTCCGAGTTTCCCCGCGCGAATCCGACCAGTATTCGGCGAGAAAT
GTTCTCCCGAAAATCGGCATGGGGAGGCAAGATGTCTCCGACGACTACGG
AACTGCAGTTTGAGAGCCCGCCGCCACATGGCATGCAATGCAGCCACCGC
GTCGCGACTCGATGGGACGTGTACTCCGTTGTGCGTGTAGAGCTCTGCTG
CACCTTGTCGAGATGGCACAATCGCGTCGCACGCACGCAATGCAAACACC
CTTTTCTTTCGAATCAGTCGCAGCGCCGCCCGGGACGCGCACTCCGGTGT
GCTGTAACCACATCTTTTCGAGATGGCACAATCGCGTCGCACTCACGCAA
TGCAAGCACCCTTTTCTTCCTGCGTGGAAAGACAAGAAGCGAGTGGAAAA
TAGAGGTGATCCTACTTTCACGCGTTCCGGGCCCCAACCCCGTCTTTTTT
CGAATCGGCCGCAACCCCCCCCGGGACATGCACTACCACACCTTGTTGAG
TTGGCACAGTGGCGTCGCACACAATGCAAACACCTTTTTCTTTCGAATCG
GCCGCAATCCCCCCGGGACGTGCACTCCAGTGGCTGTACCACACCTTGTT
GAGATAGCACAATCACATCGCACGCACACAATGCAAACATCCTTTTCTTT
CGCACCCCCCCCCCCCACGCCCCCCCCCACCTTCAGCCGCAGGGCGGACC
CTCTGCCGAACGGGGAGGGCCCGTACGACGACCTCGCACACCACCAGCGC
CGCGGGGCTAGACGGGCCTCTAGGGGGAGCCCCACTTCCGCTGCCGCCGC
CGCCGCAGAGGAGGGTCTGCAAC back to topCoding sequence (CDS) from alignment at S-ischiensis_contig91:331360..333732+ >mRNA_S-ischiensis_contig91.20916.1 ID=mRNA_S-ischiensis_contig91.20916.1|Name=mRNA_S-ischiensis_contig91.20916.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=534bp|location=Sequence derived from alignment at S-ischiensis_contig91:331360..333732+ (Schizocladia ischiensis KU_0333)
GCGGCGCCGCCGGCAGGTGGAGGAGGAGGGGCCGGTGCCCGGGACCATTC
TACTGCCGTAGGGGCAGGCGTGGGTGGTGTGGCCGACGGCGGAGCAGATG
TGCCCGACCGGGAGAGACAGAGGAGGAACAGGCGGCGCCGCCGGCAGGTG
GAGGAGGAGGGGCCGGTGCCCGGGACCATTCTACTGCCGTAGGGGCAGGC
GTGGGTGGTGTGGCCGACGGCGGAGCAGATGTGCCCGACCGGGAGAGACA
GAGGAGGAACAGCCGCAGGGCGGACCCTCTGCCGAACGGGGAGGGCCCGT
ACGACGACCTCGCACACCACCAGCGCCGCGGGGCTAGACGGGCCTCTAGG
GGGAGCCCCACTTCCGCTGCCGCCGCCGCCGCAGAGGAGGGTCTGCAACC
GCAGGGCGGACCCTCTGCCGAACGGGGAGGGCCCGTACGACGACCTCGCA
CACCACCAGCGCCGCGGGGCTAGACGGGCCTCTAGGGGGAGCCCCACTTC
CGCTGCCGCCGCCGCCGCAGAGGAGGGTCTGCAA back to top
|