mRNA_S-ischiensis_contig91.20904.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig91.20904.1
Unique NamemRNA_S-ischiensis_contig91.20904.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: D8LIT8_ECTSI (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIT8_ECTSI)

HSP 1 Score: 361 bits (926), Expect = 1.130e-108
Identity = 270/540 (50.00%), Postives = 307/540 (56.85%), Query Frame = 1
Query:   64 GLEALMPT----GTVA-ALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAA-------------------ASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTK------------ATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVEL-----LAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHG-----GRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRCEDM 1545
            GLEAL P     G+ A ALSGLPD+ +PFTVLGIETSCDDT AAVVRSDG VLGE +AGQA +HE WGGVVP LA ++H  +M+GV+  AL+ AG+ SA EVDA+AVTVGPGLEICLRVG EKAK+LA++ GKPFVA+HHLEAH LLAR   T          RA+ P A                     S  A  A       A A A         F A      A S+        X XXXXXXXXXXXXXXXXX  G+V                  A SA V  V S        +A  P             K   G        D +      L FP+LALLVSGGHCQLLLC GVG Y V+GGTVDDALGEAYDKAARLLGL VGGGGGPAVEALA  G+  A+PL VPMQ+RKD DFSFAGLKN+FR+AVT+  EE+       + P ATQ                +        L       PT       AALP+ ++ADLAASFQH AIRHLE+RV RAM  CE M
Sbjct:   37 GLEALHPPQGPPGSGAPALSGLPDVSKPFTVLGIETSCDDTAAAVVRSDGAVLGEAIAGQADVHEEWGGVVPGLARDSHALKMDGVVERALEQAGLGSAAEVDAVAVTVGPGLEICLRVGAEKAKALAAEYGKPFVAIHHLEAHALLARKSFTE--------TRASSPSAXXXXXXXXXXXXXXXXRSSDVSAAAAVASSAPSTSAFATA---------FTA------AVSDVSASXXXXXXXXXXXXXXXXXXXXXXXGPGDVSAXXXXXXXXXXXXXFXAAFSAAVTDVSSASARAASGVAP-PAXXXXXXXXXXXCKGAAGSGTSAVDDDDDTGETPPLEFPFLALLVSGGHCQLLLCEGVGVYTVLGGTVDDALGEAYDKAARLLGLQVGGGGGPAVEALALKGDSSAVPLAVPMQSRKDLDFSFAGLKNSFRMAVTKTVEENDKKMRENKRPGATQVGDRVNGGDAELGAAETDKGTGTEGLGGDEVLSPTASMERRGAALPESMRADLAASFQHTAIRHLEERVRRAMDTCEAM 552          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A7S4J610_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J610_9STRA)

HSP 1 Score: 315 bits (807), Expect = 9.750e-94
Identity = 200/484 (41.32%), Postives = 245/484 (50.62%), Query Frame = 1
Query:   88 GTVAALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRCE 1539
            GT  A+SGLPD  +PFTVLGIE+SCDDTGAAVVRSDGV+LGE +A Q +IHE WGG+VP LA  AH+E+++G+I  ALQ AGMSS ++VDAI VTVGPGLEICLRVGC KA+ LA K GKPFV +HHLEAH L+AR                                                                                                                 P G+                 S   F +P  E   +    +E   FP+LALLVSGGHCQLL C  +G+Y ++GGT+DD+LGEA+DK ARLLGL VGGGGGPAVEALARDG+PKA+ LP+P+Q RKDCDFS+AGLK A R+A  +  +E                           + SI +                     L +  KA++AASFQ+VAIRH+EQR+ERAM   E
Sbjct:  136 GTFTAISGLPDRTKPFTVLGIESSCDDTGAAVVRSDGVILGEALASQHEIHEEWGGIVPGLARTAHEEKIDGIIHEALQNAGMSSVEDVDAIGVTVGPGLEICLRVGCNKARDLAEKYGKPFVGIHHLEAHILMAR----------------------------------------------------------------------------------------------------------------LPYGD-----------------SDDLFISPATEDMHEAARAIE---FPFLALLVSGGHCQLLKCLDIGKYSILGGTMDDSLGEAFDKTARLLGLPVGGGGGPAVEALARDGDPKAVKLPIPLQRRKDCDFSYAGLKTAVRIAAEKLVKER-------------------------ELESIDE---------------------LSRDDKANIAASFQNVAIRHIEQRLERAMSMME 441          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A7S2RZ45_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RZ45_9STRA)

HSP 1 Score: 299 bits (765), Expect = 1.020e-88
Identity = 193/481 (40.12%), Postives = 241/481 (50.10%), Query Frame = 1
Query:  100 ALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRCED 1542
            A SGLPD  RPFTVLGIE+SCDDTGAAVVRSDGV+LGE +A Q +IHE WGGVVP LA  AH+E+++ VI  A+Q AG+SS  E+DAI VTVGPGLEICLRVGC KA+ LA +  KPFVA+HHLEAH L+AR    LPP+K+                                                                                                          E Q T     + + N  I                        FP+LALLVSGGHCQ+L C GVG+Y ++GGT+DD+LGEAYDK ARLLGL +GGGGGPA+EALA++G+PKA+ LP+P+Q RKD DFS+AGLK A R                          T +   +  ++ SI +                     L  Q +A++AASFQ+VAI H+EQR++RAM   E+
Sbjct:   60 AKSGLPDKTRPFTVLGIESSCDDTGAAVVRSDGVILGESLASQHKIHEEWGGVVPGLAKLAHEEKIDVVIEEAIQNAGLSSIDEIDAIGVTVGPGLEICLRVGCNKARELAIQFQKPFVAIHHLEAHILMAR----LPPQKK----------------------------------------------------------------------------------------------------------EQQSTSIDIVSHESNCAIQ-----------------------FPFLALLVSGGHCQMLKCLGVGRYSIIGGTIDDSLGEAYDKTARLLGLPIGGGGGPAIEALAKEGDPKAVKLPIPLQKRKDFDFSYAGLKTAVRT-------------------------TAEKLCIERNVTSIVE---------------------LSHQDRANIAASFQNVAITHIEQRLKRAMDLLEN 361          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A7S2V5H1_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5H1_9STRA)

HSP 1 Score: 300 bits (769), Expect = 2.630e-88
Identity = 195/490 (39.80%), Postives = 239/490 (48.78%), Query Frame = 1
Query:   73 ALMPTGTVAALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRCED 1542
            ++ P+    A SGLPDL +PFTVLGIETSCDDTG AVVRSDG +LGE V GQA IH  WGGVVP+LAM+AHK  ++  +  AL+ AG+ S  +VDAI VTVGPGLE+CLRVG   AK+LA +   PFV VHHLEAH L+AR                                                                                                                                     I       P   +++K+  + EL+ +P+LALLVSGGHCQLLL  G G+Y V+GGT+DDALGEAYDKAARLLG+SVG GGGP +EALAR G+P+++P+ VPM  RK CDFSFAGLKNAFR+A   KA E                     F+V  +                         + L + +KADLAASFQH AI+HLE R++RAM  CED
Sbjct:   95 SVFPSDPPEAKSGLPDLTKPFTVLGIETSCDDTGVAVVRSDGAILGEAVVGQADIHAEWGGVVPNLAMDAHKSAIQSTVQLALERAGLKSPADVDAIGVTVGPGLEVCLRVGAGAAKALALEHRLPFVGVHHLEAHCLMAR-------------------------------------------------------------------------------------------------------------------------------------IPSSPLVPPTPYQDQKELVEDELV-YPFLALLVSGGHCQLLLVEGAGRYSVVGGTLDDALGEAYDKAARLLGISVGIGGGPVLEALARGGDPESVPMTVPMLQRKGCDFSFAGLKNAFRMAANNKAAE---------------------FNVEDA-------------------------SLLEEPVKADLAASFQHTAIKHLEHRLKRAMQICED 404          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A835YKI5_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI5_9STRA)

HSP 1 Score: 295 bits (755), Expect = 8.220e-88
Identity = 195/469 (41.58%), Postives = 224/469 (47.76%), Query Frame = 1
Query:  130 PFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRC 1536
            PFTVLGIETSCDDTGAAVVRSDG +LGE +A Q  IHE+WGGVVP LA EAH   ++ ++ AAL  AGM+SA +VDA+AVTVGPGLEICLRVGCEKAK+LA +  KPFVAVHHLEAH +LAR                             AG G  EG   P                                                                                                                    AFP+LALLVSGGHCQLLLC GVG++ ++GGTVDDALGEA+DK ARLLGL  GGGGGPAVE  AR G+P+A PLP+PM  +KD +FS+AGLKN+FR+ V R   E                                   L +SA            A LP    ADLAASFQH AI HLEQRV RA+  C
Sbjct:   18 PFTVLGIETSCDDTGAAVVRSDGTILGEALASQQDIHEKWGGVVPGLAREAHVNEIDRIVAAALAQAGMASAAQVDAVAVTVGPGLEICLRVGCEKAKALALEHAKPFVAVHHLEAHVMLAR-----------------------------AGLGAEEGLAPP--------------------------------------------------------------------------------------------------------------------AFPFLALLVSGGHCQLLLCEGVGRFSILGGTVDDALGEAFDKVARLLGLPTGGGGGPAVERCARAGDPRAYPLPIPMVHKKDMNFSYAGLKNSFRMTVERARAE-----------------------------------LALSAD-----------APLPDGAVADLAASFQHAAITHLEQRVRRAVAHC 295          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A7S2YT17_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YT17_9STRA)

HSP 1 Score: 292 bits (747), Expect = 2.760e-85
Identity = 190/479 (39.67%), Postives = 234/479 (48.85%), Query Frame = 1
Query:   91 TVAALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAM 1527
            T  A+SGLPD  + FTVLGIE+SCDDTGAAVVRSDGV+LGE +A Q +IHE+WGGVVP LA +AH+E+++ V++ AL  AGMSSA EVDAI VTVGPGLEICLRVG  KA  LAS+  KPFV +HHLEAH L+AR    LP                                                                                                                    +   N ++ I I+            +   A    + FP+ ALLVSGGHCQ++ C GVG Y ++GGT DD+LGEA+DK ARLLGL VGGGGGPAVE+LAR+GN  AI LP+P++ R+D DFS+AGLK A R A  R A EH                                     +  T   +P SV         KAD+AASFQH AI+H+EQR++  M
Sbjct:  112 TFQAISGLPDRTKLFTVLGIESSCDDTGAAVVRSDGVILGEALASQQEIHEQWGGVVPGLARDAHQEQIDSVVSQALTNAGMSSAAEVDAIGVTVGPGLEICLRVGSTKAIQLASEYQKPFVGIHHLEAHILMAR----LP--------------------------------------------------------------------------------------------------------------------SSISNEEELIHITA----------TEDTHASTRAIEFPFFALLVSGGHCQMMRCSGVGNYTILGGTTDDSLGEAFDKTARLLGLPVGGGGGPAVESLAREGNRTAIDLPIPLRYRRDYDFSYAGLKTAVRKAAERLATEH-------------------------------------NVETSDKLPDSV---------KADIAASFQHRAIQHIEQRLKYGM 414          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A7S1Z3R7_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z3R7_9STRA)

HSP 1 Score: 291 bits (745), Expect = 4.060e-85
Identity = 191/481 (39.71%), Postives = 239/481 (49.69%), Query Frame = 1
Query:  100 ALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRCED 1542
            A SGLP   +PF VLGIE+SCDDTGAAVVRSDGV+LGE +A Q  IHE WGGVVP LA  AH+E+++ VI  ALQ A ++ + EVDAI VTVGPGLEICLRVGCE+AK LA +  KPFV VHHLEAH L+AR                                                                                                                 P G L+            +E+   +         ++    V  ++FP+LALLVSGGHCQL+ C G+G+Y ++GGT+DD+LGEA+DK ARLLGL VGGGGGPAVEALA++G+PK+I LP+P+Q RKDCDFS+AGLK A R+A  +   E G                      + SI                          L +Q KA++AASFQ+VAIRH+EQR+ RAM   E+
Sbjct:  111 AKSGLPARNKPFVVLGIESSCDDTGAAVVRSDGVILGESLASQHDIHEEWGGVVPGLAKTAHEEKIDLVIEEALQNANLTMS-EVDAIGVTVGPGLEICLRVGCERAKDLALRYKKPFVGVHHLEAHILMAR----------------------------------------------------------------------------------------------------------------LPFGNLE-----------RVEVQPAT---------EEVHEAVHAMSFPFLALLVSGGHCQLMKCLGIGRYSIIGGTIDDSLGEAFDKTARLLGLPVGGGGGPAVEALAKEGDPKSIQLPIPLQRRKDCDFSYAGLKTAVRMAADKLRLERG----------------------LESIDD------------------------LCRQDKANIAASFQNVAIRHIEQRLNRAMDMIEN 412          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A1Z5K725_FISSO (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K725_FISSO)

HSP 1 Score: 279 bits (713), Expect = 6.850e-81
Identity = 187/476 (39.29%), Postives = 224/476 (47.06%), Query Frame = 1
Query:  100 ALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAM 1527
            ALSGLP   + FTVLGIE+SCDDTGAAVVRSDG +LGE +A Q+ IH  WGGVVP LA EAH+  ++ ++  AL+ AGM+SA +VDAI VTVGPGLEICLRVG  KA++LA +  KPFV VHHLEAH L+AR    LP                                                                                                                      Y +  K +E                         FP+LALLVSGGHCQLL C G+G   V+GGT DD+LGEAYDK ARLLGL VGGGGGP VE LAR+G+P  IPL VP+Q+RKD DFS++GLK+  R    R A+E G   P                D+ HSI                               KA++AASFQHVAI+H+EQR+ RAM
Sbjct:  101 ALSGLPPNLQNFTVLGIESSCDDTGAAVVRSDGTILGEALASQSHIHAPWGGVVPGLAKEAHEAEIDRIVQEALEAAGMTSAADVDAIGVTVGPGLEICLRVGATKARALAIEYQKPFVGVHHLEAHILMAR----LP----------------------------------------------------------------------------------------------------------------------YDSASKQLE-------------------------FPFLALLVSGGHCQLLKCTGIGDMAVLGGTFDDSLGEAYDKTARLLGLPVGGGGGPVVERLAREGDPTTIPLSVPLQSRKDLDFSYSGLKSNVRRVAERLAKEQGVETPA---------------DLSHSI-------------------------------KANIAASFQHVAIQHVEQRLRRAM 383          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: A0A448Z7G4_9STRA (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7G4_9STRA)

HSP 1 Score: 278 bits (711), Expect = 3.390e-80
Identity = 189/486 (38.89%), Postives = 228/486 (46.91%), Query Frame = 1
Query:   91 TVAALSGLPDL--GRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRCED 1542
            T  A SGLP+    RPFTVLGIE+SCDDTGAAV+RSDGV+LGE +A QA IHE WGGVVP LA  AH+E ++ VI  AL  A  ++ +++DAI VTVGPGLE+CLRVG +KA  LA++  KPFV VHHLEAH L+AR                                                                                                                                   IE                   + E L FP+LALLVSGGHCQLL C G+G+Y V+GGT+DD+LGE YDK ARLLGL +GGGGGPA+EALA+DGN  AIPL +P+Q R+DCDFS+AGLK   R A  + A+E G  + P                                               L  Q KADLAASFQ++AI+HLEQR+ERAM   ED
Sbjct:  124 TFVARSGLPEGHDSRPFTVLGIESSCDDTGAAVLRSDGVILGESLASQAHIHEEWGGVVPGLAKSAHEENIDRVIDDALSKA-QTTMEDIDAIGVTVGPGLELCLRVGSQKACQLATEYNKPFVGVHHLEAHILMAR-----------------------------------------------------------------------------------------------------------------------------------IE-------------------NQEELRFPFLALLVSGGHCQLLKCLGIGRYSVIGGTLDDSLGECYDKTARLLGLPIGGGGGPALEALAKDGNATAIPLTIPLQKRQDCDFSYAGLKTNIRRAAEQLAKERGADSVPE----------------------------------------------LSHQDKADLAASFQNIAIKHLEQRLERAMKAMED 412          
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Match: K0T4A1_THAOC (Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T4A1_THAOC)

HSP 1 Score: 277 bits (709), Expect = 5.720e-80
Identity = 182/484 (37.60%), Postives = 226/484 (46.69%), Query Frame = 1
Query:   88 GTVAALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQAQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVGPGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEKGGERAAVPGAAASGGARRAGEGXXEGATAPAXXXXXGGAGFVAGERGAQAPSEGGEGAAVPXAXXXXXXXXXXXXXXXXXXSGEVQQRPTKATSADVQGVVSPGGELQVTMAQYPNIDKNIEISMPSFKTP*GEKNKKKQADVELLAFPYLALLVSGGHCQLLLCRGVGQYVVMGGTVDDALGEAYDKAARLLGLSVGGGGGPAVEALARDGNPKAIPLPVPMQARKDCDFSFAGLKNAFRLAVTRKAEEHGGRAPPATQGRPGCQQTTKHFDVVHSIPSIWQPFLYVSARTHPTMPSSVARAALPQQLKADLAASFQHVAIRHLEQRVERAMGRCE 1539
            G+  A SGLP +  PF VLGIE+SCDDTGAA++RSDGV+LGE +A Q  IHE WGGVVP LA  AH++ ++ V+  +LQ AGM   ++VDAI VTVGPGLEICLRVGCEKAK LA +  KPFV VHHLEAH L+AR                                                                                                                                             P       + A+   + FP+LALLVSGGHCQ+L C G+G Y ++GGT+DD+LGEA+DK ARLLGL VGGGGGPAVEALARDGNPK++ LPVP+Q R+D DFS+AGLK A RLA  +   E G  +P                                                L  Q KA++AASFQ+V+ +H+E R+ RAM + +
Sbjct:  115 GSFVAKSGLP-VNEPFCVLGIESSCDDTGAAIIRSDGVILGESLASQHSIHEEWGGVVPGLAKTAHEQNIDRVVNESLQRAGMQI-QDVDAIGVTVGPGLEICLRVGCEKAKELAIQNKKPFVGVHHLEAHILMAR--------------------------------------------------------------------------------------------------------------------------------------------LPKDHNQTDQPAEDRSMEFPFLALLVSGGHCQILKCIGIGSYTILGGTLDDSLGEAFDKTARLLGLPVGGGGGPAVEALARDGNPKSVKLPVPLQKRRDMDFSYAGLKTAVRLAAEKICVERGVESPDR----------------------------------------------LSHQDKANIAASFQNVSFKHVEVRLGRAMDKVQ 410          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig91.20904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIT8_ECTSI1.130e-10850.00Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S4J610_9STRA9.750e-9441.32Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2RZ45_9STRA1.020e-8840.12Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2V5H1_9STRA2.630e-8839.80Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A835YKI5_9STRA8.220e-8841.58Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S2YT17_9STRA2.760e-8539.67Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A7S1Z3R7_9STRA4.060e-8539.71Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A1Z5K725_FISSO6.850e-8139.29Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
A0A448Z7G4_9STRA3.390e-8038.89Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]
K0T4A1_THAOC5.720e-8037.60Probable tRNA N6-adenosine threonylcarbamoyltransf... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig91contigS-ischiensis_contig91:219058..229227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score206.1
Seed ortholog evalue2.2e-50
Seed eggNOG ortholog2880.D8LIT8
Preferred nameOSGEPL1
KEGG rclassRC00070,RC00416,RC00773
KEGG koko:K01409,ko:K10721
KEGG ReactionR08134,R08138,R10648
KEGG Pathwayko00981,map00981
GOsGO:0000003,GO:0000408,GO:0000959,GO:0000963,GO:0002949,GO:0003006,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0007275,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008270,GO:0009451,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016020,GO:0016070,GO:0016787,GO:0017171,GO:0019538,GO:0019866,GO:0022414,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0070011,GO:0070525,GO:0070900,GO:0071704,GO:0072670,GO:0090304,GO:0090646,GO:0140053,GO:0140096,GO:1900864,GO:1901360,GO:1901564
EggNOG free text desc.mitochondrial tRNA threonylcarbamoyladenosine modification
EggNOG OGsCOG0533@1,KOG2707@2759
EC2.3.1.234
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00199,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionKae1/YgjD family
Ec32 orthologEc-20_001490.1
Exons10
Model size2751
Cds size846
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig91.20904.1prot_S-ischiensis_contig91.20904.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig91 224911..229149 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817414.5819573-UTR-S-ischiensis_contig91:219057..2199401622817414.5819573-UTR-S-ischiensis_contig91:219057..219940Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 219058..219940 -
1695741097.2802973-UTR-S-ischiensis_contig91:219057..2199401695741097.2802973-UTR-S-ischiensis_contig91:219057..219940Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 219058..219940 -
1622817414.5932567-UTR-S-ischiensis_contig91:221072..2213801622817414.5932567-UTR-S-ischiensis_contig91:221072..221380Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 221073..221380 -
1695741097.2932076-UTR-S-ischiensis_contig91:221072..2213801695741097.2932076-UTR-S-ischiensis_contig91:221072..221380Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 221073..221380 -
1622817414.60429-UTR-S-ischiensis_contig91:221594..2218701622817414.60429-UTR-S-ischiensis_contig91:221594..221870Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 221595..221870 -
1695741097.3031826-UTR-S-ischiensis_contig91:221594..2218701695741097.3031826-UTR-S-ischiensis_contig91:221594..221870Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 221595..221870 -
1622817414.615915-UTR-S-ischiensis_contig91:222110..2221941622817414.615915-UTR-S-ischiensis_contig91:222110..222194Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 222111..222194 -
1695741097.3142881-UTR-S-ischiensis_contig91:222110..2221941695741097.3142881-UTR-S-ischiensis_contig91:222110..222194Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 222111..222194 -
1622817414.627035-UTR-S-ischiensis_contig91:223648..2237561622817414.627035-UTR-S-ischiensis_contig91:223648..223756Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 223649..223756 -
1695741097.325457-UTR-S-ischiensis_contig91:223648..2237561695741097.325457-UTR-S-ischiensis_contig91:223648..223756Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 223649..223756 -
1622817414.6415782-UTR-S-ischiensis_contig91:224742..2249101622817414.6415782-UTR-S-ischiensis_contig91:224742..224910Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 224743..224910 -
1695741097.337315-UTR-S-ischiensis_contig91:224742..2249101695741097.337315-UTR-S-ischiensis_contig91:224742..224910Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 224743..224910 -
1622817414.7164044-UTR-S-ischiensis_contig91:229149..2292271622817414.7164044-UTR-S-ischiensis_contig91:229149..229227Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 229150..229227 -
1695741097.4178154-UTR-S-ischiensis_contig91:229149..2292271695741097.4178154-UTR-S-ischiensis_contig91:229149..229227Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 229150..229227 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817414.6537037-CDS-S-ischiensis_contig91:224910..2249121622817414.6537037-CDS-S-ischiensis_contig91:224910..224912Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 224911..224912 -
1695741097.3491294-CDS-S-ischiensis_contig91:224910..2249121695741097.3491294-CDS-S-ischiensis_contig91:224910..224912Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 224911..224912 -
1622817414.6678882-CDS-S-ischiensis_contig91:225282..2253351622817414.6678882-CDS-S-ischiensis_contig91:225282..225335Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 225283..225335 -
1695741097.3623753-CDS-S-ischiensis_contig91:225282..2253351695741097.3623753-CDS-S-ischiensis_contig91:225282..225335Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 225283..225335 -
1622817414.679814-CDS-S-ischiensis_contig91:225407..2259041622817414.679814-CDS-S-ischiensis_contig91:225407..225904Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 225408..225904 -
1695741097.3738334-CDS-S-ischiensis_contig91:225407..2259041695741097.3738334-CDS-S-ischiensis_contig91:225407..225904Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 225408..225904 -
1622817414.6914175-CDS-S-ischiensis_contig91:226381..2265401622817414.6914175-CDS-S-ischiensis_contig91:226381..226540Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 226382..226540 -
1695741097.3862915-CDS-S-ischiensis_contig91:226381..2265401695741097.3862915-CDS-S-ischiensis_contig91:226381..226540Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 226382..226540 -
1622817414.7033646-CDS-S-ischiensis_contig91:229014..2291491622817414.7033646-CDS-S-ischiensis_contig91:229014..229149Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 229015..229149 -
1695741097.4067347-CDS-S-ischiensis_contig91:229014..2291491695741097.4067347-CDS-S-ischiensis_contig91:229014..229149Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 229015..229149 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig91.20904.1

>prot_S-ischiensis_contig91.20904.1 ID=prot_S-ischiensis_contig91.20904.1|Name=mRNA_S-ischiensis_contig91.20904.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=282bp
MPTGTVAALSGLPDLGRPFTVLGIETSCDDTGAAVVRSDGVVLGEVVAGQ
AQIHERWGGVVPSLAMEAHKERMEGVITAALQGAGMSSAKEVDAIAVTVG
PGLEICLRVGCEKAKSLASKLGKPFVAVHHLEAHTLLARPRLTLPPRKEK
GGERAAVPGAAASGGARRAGEGGGEGATAPAAEAAAGGAGFVAGERGAQA
PSEGGEGAAVPAAAAAGEVGLVAGEQGAQAPSGEVQQRPTKATSADVQGV
VSPGGELQVTMAQYPNIDKNIEISMPSFKTP*
back to top

mRNA from alignment at S-ischiensis_contig91:219058..229227-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig91.20904.1 ID=mRNA_S-ischiensis_contig91.20904.1|Name=mRNA_S-ischiensis_contig91.20904.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=10170bp|location=Sequence derived from alignment at S-ischiensis_contig91:219058..229227- (Schizocladia ischiensis KU_0333)
GGCAGGGCCAAGAGCGTGCGGGGGTCGGGACAGGGTGGTTGGGCTGGGGG AGAGGCGGGGGGGGGTCTAGAGGCTCTGATGCCTACTGGGACGGTAGCTG CGCTGTCTGGGCTCCCGGACCTTGGTCGGCCCTTCACGGTGCTGGGCATC GAGACAAGCTGCGATGATACAGGGGCGGCGGTGGTGCGTTCGGACGGGGT GGTGCTAGGAGAGGTGAGACCTGTCAGACCGACGGGGAACGCCGTTTGAC TTGCGCAGGCTAGTCTAGCACCGTTCCCCGCTGTTCTGACACGCACGGCG GTCGAAGGATCTGGCTTGGGGTGTTCGGACAAGACTATATTGTGTGTGTG TGTGTGTGTGTGCGCGCGCGCGCGCGCGCGCACGTGCACATGCGTGCTTG TGGGCGGCGGTGGTGCGTTCGGACGGGGTGGCGCTAGGAGAGGTGAGGCC AGGGTTGGCACTGAGAGGTGGACTAGAACCTAATTGGCCTTCATTTTAGG TCTAATTACGCCTAGTTAGCCTCTAGTTGAGGGCCTAAAAGGGCAACACT TAGGGATTAAGTGCCAGCCCTGGGTGAGACGTCCTTGTGTGTGTTCAGCA CTGTGTGTGTGTGTGTGTGTGCGTGTGCACATGCGTGTGTGTTTGTGTGC GCGCGCGTGTGTGTGTGCACATGCGTGTGTGTGCGTGCGTGTGTGCGTGC GTACGGGGGCGACGGTGGTGCGTTCGAATGGGGGGTGCTGGGAGAGATGA GACTGTCCTTGTCTGTGTTTTTGTGTGTGTGTGCGTGCGTGTGCGTGTGC ACATGTCTGTCTTGCAGGGGAGGCGGTGGTGCGTTCGGACGGGGTGGTGC TGGGTGAGATGAGCCGTCCTTGCGTGTGTGTGTGTGCGCGCGCGCGTGCG CGCACATGTGTGCGCGCTGTGTGTGCATGTGTATGTGCTTGACTCGTTGG TGCAGTACGCGGTGGCGCCATGCAGCGCGTGCCATCCGCTAGGGCACTAG GTACCAGTCATGTGGTGGGGCAAACCAGGCAGCTGTTGCGTGCCGGCCTT GCCCTCGCATTCGTCTGAAGCCCCGGCCCGACCTCCACAACAAATGTCCT GTGTGACTATTTGTTGGAGTAGACCATCATGTTAAAAAATTTAGTGCTGT AGCACTGTGTTCAAGCATTGTACTACTACTCCACTTACTTTGCACTCGAG TACCGTGGTAGCTTACCGCAATCGTCGGAGAGATCTTGCCCTCACGGGAC AATTTTCGGGCGAATATTTCTGATGGGGAATGTACTGGGTTGTTCCCGAA AGCCCTCGGAAATGTTACCCCGGGCCCTGAGGGAGATTTTCCGAGTTTTC CTGCGCGAATCCGACCGGTGTTCGGCGAGAAAACTTCTCCCGAGAATTGG CATGGGGGGGCAAGGTCACTCGGACGATTACGGTACCGTGGTAGTAGCAC GAGGGCAGATAGAGCAGGCTGGGTTTGCATCAGCTTGCACGCACCGAAAT GTCAGCATTGTACCAAGTGTTGTTGCCACGAGTAGATTGCACATCTCTTC TAATTGCTTCACCCTGCTAGTAGAGTACTCGTATTGTGTACTAGAGCTAT GTACTTCCTGTAGTACTTCTAAGCAAGTAGGCACTCGCTGTACTCGGCGA TAGTTTGTGTACTTCATACTATATATGTGTGTACTCATGTGGTGCTTGAG GTACTGGAGTCCCGAGAACATTGACCACGCGCCTCGGCCGAGACGGAGCA GCTGTACTCATGCATGTGTCTGTTGGGACACCGAATGTAGTACTTCGGGA AGTACTTTGCTTACTGTCCATGCTGGGCGGGCCCGCTACGCCCCGCCCCC CCCGCCCCGCGCCCATGCACGCGCATACACACGCACACACACACACAGAC ACACAGAGAGGGGGCACCCACACGAACGCAAGCGCCCGCACAGCAAGCGA AAGCATGCAGACATGCACGGAAATGTACTTCGAAGTACAGTACTGTGCAT ACTTGCAGCATTGCATGTGCACGCTCACAAACACGCACACACACATATAT ATATGTATATAGTTCGAAGTATATATGTACTCAAGTTGTGCTTGCCGTAG TCCCGAGACCGTTGACCACGCTCCTCGGTCGAGATGGAGCAGTAGCACAT ATGTACTCACGTGGTGCTTGCCTTAGTCCCGAGACTATTGACCACGCGCC TCTGTCGAGACGGAACACAACCACATGCAGACCAAACACAACACTGATGA CCGCACCCGCACTGCTGCAATGCGCTGTTGAGGTCTTTTGTGACGTGGTT TGATGTGACGTGATGTCAGACTACTGAACATTACTTCGAAGTACAATACA GCCCACATCACATCACATCACATGATCACACATGTTGCATTTCCCCCCCC CCTCCTTGTTCTTAGTTCCTTATTGTGGTAATCACTAATAAAAGAACCCT CAATTCTTAAATGGGACAACTACTATTGCGAGAACAGTCAATCTCACACA AGTGCGATTGTACGTCGTTACAATTTACATGAATCACCGCTGTTGCATTC AAACGCCAATCAAGGTGGTGGCAGGCCAGGCTCAGATCCACGAGCGCTGG GGTGAAGTAGTCCCATCCCTGGCGATGAGTAAGATTGATTTGCTTAGATA TTCCATCACTGCCGCACACATTCAAACGCCAACCAAGGTGGTGGCAGGAC AGGCCCAGATCCATGAGCGCTGGGGTGGAGTGGTCCCGTCCCTGGCCATG GAGGCCCACAAGGAGCGCATGGAAGGCGTTATCACGGCGGCTCTCCAGGG AGCGGGCATGTCCTCCGCTAAGGAGGTGGACGCCATCGCTGTCACGGTGA GCGAGTGAAGAGCGATTGTGTGTGTGTGCATGTACTTCCCCCCCCCCCCC CCTCCTCCTCCTCCTCCTCCCCGTCCACCTCCCCCTCCTCCTTTTCTCCT CTTCACCACACAATTTCCCCTGGCGAGCTATATAAGGAAGGGCCACTGCT GGCCGTGAAATTGTTGACACATGAAAGAGCTCAGTGAGTGATTTCATTTG CGCTGCAGTTTCGGATGACAACATCACATGGGCCGAGCAACAGGTCAATA GATATTCGATAAAATTATTTGGGCAACGAAAATCACACTTTTCTGCCATG GTTACCTCTCGCAGGTGGGCCCGGGCCTGGAGACCTTCCTGCGCGTGGGC TGTGAGAAGGCCAAGTCCCCAGCCTCCGAGCTATACAGTACTTCGAAGTG TTTCCGGAAGTATGTAGAGCCCTATATGAACAGATTGATCAGCCTTGAAA TGTACTGTAAACGCCCATCGCAGGTGGGCCCGGGTCTGGAGATCTGCCTG CGCGTGGGCTGCGAGAAGGCAAAGTCCCTAGCCTCCAAGCTGGGCAAGCC CTTCGTGGCCGTGCACCACCTAGAGGCGCACACACTCCTGGCCCGGCCAC GCCTGACCCTCCCACCCCGCAAGGAGAAAGGAGGGGAGCGGGCGGCGGTG CCGGGGGCGGCAGCGTCAGGGGGGGCGAGGAGGGCGGGTGAGGGAGGAGG GGAGGGGGCCACGGCGCCGGCGGCGGAGGCAGCAGCAGGGGGGGCGGGGT TTGTGGCAGGGGAGCGGGGGGCACAGGCACCATCGGAGGGAGGGGAGGGG GCTGCGGTACCGGCGGCGGCGGCAGCAGGGGAGGTGGGGTTGGTGGCGGG GGAGCAGGGGGCACAGGCACCATCGGGAGAAGTGCAACAACGCCCGACCA AGGCGACGTCGGCGGATGTGCAAGGGGTCGTTTCGCCAGGCGGGGAGTTG CAGGTAACCATGGCACAATAGTGCGATTCTTTTTGCTCAAATAGTTTTTT GCGATATCGAAAATGTTCGCCCAAATTGTGATCGAAAACCAGCCCAAATA TCGACAAAAATATCGAAATATCGATGCCGAGCTTCAAAACGCCGTGTCAA GGTGTGGAAACCCCACGGATTTTTGCTGGTAGTTCCCGCCAAAATCCGTG GGGTTTCCACACCTTGAGATGGTGTTTTGGCATCGAAGGCCCAAACACTT GCCCAAATATCGATATTGTCCCAAAAATATCGATTTGCTCGACTTGCAGC CCGAAATTGCCATTTTTTTAATGTCGCACTTTTGTGCCATGGTTAGTTGC AGGGCCATGAGCAGGCGGATGTGGAGTTGATTCGTATAAATTGTAACGAG GTAATCGCGCGTGTGTGCGATTGACTGTTCTCGTATTAGTAGTTGTCCCA TATAGCAATTGAGTATTCTTACACTCGAGCAGTAGTGATTATCACATCTA GGATTTAAGAACAAGGAGGGGAAAAAAACAAAAAAAAGCAGGCGGATGTG GAGTTGCTGGCGTTCCCGTACCTGGCGCTGCTTGTGTCTGGGGGGCATTG CCAGCTGCTGCTGTGCCGGGGGGTGGGGCAGTACGTGGTGATGGGGGGTA CCGTGGACGACGCGCTTGGCGAGGCGTACGACAAGGTGAGAGGGAAGTGA GCTGGCCGTCGGCTGTACGGTTACTAGTACTAGTACTCGAGTACTGCAGC AGTATGTGCTACAGTAGCGCAGTGTAGTACTTCTGAAGTATATATACTAC GTGGTACATGTACTCACGTTGTGCTTGCCGTAGTCCCGGGACCATTGACC GCGTGCCGTTGACGACGGAATACTATACAGTAGTACTGTACACTACTCTA TTTTTTCAGCCTTGCTTGGCTTACCAGGCGTTCTCAGCCAATGCAAAGCT TAAGCAAATACATATTCCGTTGACCACGCACCGTCGAGGGTGGAGCAGTC TCCCTCCTGCCCCTGGCGAGCGAGGGTGGGGGGGAGGGAACACCCCCCCC GCCATACAGTACGTACGAGGTCCGTAATCGTTGGAGAGATTTTGCCTCCA CGGGACACTTCTCGGGGTAATATTTCTAGCCGGGAAGGTCCTGAAGAGTC CCGAAAACTTTCCAAAAGGAAAACCTCCAGGTCCTGAGGGAGATGTTCCG AGTTTCCTGCGCGAATCCGATCAGTATTCGGCGAGATACATTCTCCCGAA AGTTGGCATGGGGGGGCAAGATCTCTCCGACGACTACGGTAGTGCACAGT ACCTCTTCCAGGGAAGTGCAGTACTGTAACAGGATAAACACAGCCGACAG CACAGTACTCGTACAGCAGTACTACGTACTATGTACAGTAGCGTGTACTC ATGCTCGGGCAAGTATCCTCGTCTCTGTGCATGCCCTGGACACGAACGGT AGTACACACACATATACTCCGGAAGCACTCCGGCATATGCACTCACGTCT CTGTGCGTGCACTGGACCCGAACGCTCCTCGTCTTTGCTCCTAGTCGAGC ACAGTACATATATCCTATGCGAGGCACATCGCTCGCACTTGCGCGCGCAC GCATTCACGCACCCATGCACACAGATGACTGACTGAGAGAGGCTCTCCTC TCACGTCTCCGACTTGGGCAGGCGGCGCGGCTTCTGGGCTTGAGCGTGGG CGGTGGGGGCGGGCCCGCTGTGGAAGCCCTTGCAAGGGACGGAAACCCCA AGGCCATACCACTCCCGGTGCCCATGCAGGTCAGAATGGTCGAGTGACTC GAGTTGTACTCTAAACTCTTTGCAGGTGGCCCGAGTTAAATGCTTTGCTG TAGTCGTGAGGTTTCAACCTTTCATTCGAGAAGCAGAGCGGTCGGGACGA ACAGAATGGTCGGGTGACGCGAGCAGCAAATGCTTTGCAGGTGACTCGAG TTGTAAGCACTTTGCAGCATCCATGAGGCGTTTTTCAAAGCTTTCGTTTG AGAAGCAGCGCGGTTGGTGTGAAAGGCCATACCTCTCCATTGCCCATGCA GGTCAGAATGGTCGCGTAACTCGAGTTGCAAACGCTTTGCAGATGTGTGT GTGTGTACCCACGTCTCTGTGCATGCCCTGGACCCGAACGATCCTCGTCT TTGCTCCTTCTCGTGGATCACTGGCCAGCTGTAGCTTTGAGTCGACTCGA GTTGCAAACGCTTCGCAGCAGTCATGAGGCATGTTTCCACCTTTCATTTG AGAAGCAGAGCGGTCGGGACGAACCTGGCTTCACTACGTTAAGCGAGGTC TGCACTGCCTTTGGCGCGAGGGGAGCAAACTTTCCCCAAACTAGGAAGAA AGCTGTGATTATTGTTCTTTGGGCTACGGACCTCCCCCTCTGTCTTACAC AATGCACACACAGTCAGGCACACACCCAGGCACACATGCACAGTCTTTCT CCCCCCCACCCGCACACTCCCCCTCTCTCTGTGTGTCTAATGCTTTGTTG GCAGCGAGCACCCATATACGCGCATGACTGGTGTGTAGACTCCACACACC CATGCTTAGCTATGTGGCAATCCCCTCCTTGTTCTTCGCTCCTGGATGTG ATAATATCTATTATAGGAACACTCAATTCTTAAATGGGACAACTACCAGA CGATATGAGAACAATCAATCTCACACACGTGCAATTGTACTCGTACCTCA TTGCAATTTATATGAATCACCCCTATACAACGGCGCTGACCCTCGCCTTG GTAGGTGCGGAAAGGACTGCGACTTCAGCTTGGCCAGCCTTACCCATGGT ACGAAGTACGTACATGACTGGTGTGTAAAGCCCACACACCACATGCTTAG CTATGAGACGTTCCCCTGTACAAACGGCACTGACCATCGCCTTGGTACGC GCGGAAGTGTGCAGTAGAATGCACGCACCCATGCTTAGCTATGCGACATC CCCCTGCACAACGGCACTGACCCTCGCCTTGGTAGGCACCCATATAGTAA GCCAGATTCGTCGGCCGCGGCCCGGGCCCTGTTTAAAACGCCGTAGTTTG TGCCGCCGGTCTTAAATGCCGTAGTTTGTACCCTCCCCCATGTTGAAACA ATTTCCAGCATGTCGTGGGCTTCGGTCAAACAAGCCGTGATTGGCCAAAT TTCAACATATGCAGTAGTCCACACAGCCATGCTTAGCTATGTGACATTCC CCTGTACGACGGCACTGACCCTTACCTTGGCAGGCGCGGAAGGACTGCGA CTTCAGCTTTGCTGGACTGAAGAACGCCTTCCGCCTGGCTGTGACTCGAA AAGCCGAGGAGCACGGGGTGGAGGACGGGTGAGCACAGGTCACGGCAGAC ATAGTAGTATGAACGGCCCGCCCCCAAATCAGATGTTGGCCCACAGTTGC TATCGACATACTCGAGTACTATATATGTATATGTACTCGCGTTGTGCTTG CCGTAGTCCCGAGACCATTGACCAGTACATCCGATATATGGCGAGCAGCA TGCTGTCTGTATATCAATGCCCGAACACGCCTTACCATGTCGTCTTTCCT TTTCCAGGGTCGCGCTCCCCCAGCAACTCAAGGCAGACCTGGCTGCCAGC AAACTACTAAGCACTTTGATGTAGTACATTCGATACCAAGTATATGGCAA CCTTTTTTGTATGTCAGTGCCCGAACACATCCTACCATGCCGTCTTCTGT TGCCAGGGCGGCGCTCCCCCAGCAGCTCAAGGCAGACCTGGCTGCCAGCT TTCAGCACGTGGCCATCAGGCACCTTGAGCAGAGGGTGGAGCGTGCCATG GGCCGCTGCGAGGACATGTCCAGGTGTGTGTGTGTGTGTGTGTGTGCGTC TGTGCACGCGTGTGTGTGTGTGTGTTTGTGTGTGCGAGCGTGTGTGTGCG TGTGCGTTTGCGTGTGCTGCGGGCGCGCATGCACATGTCTGCGTGCACTT TCTCGCAAAGCATGCGTGCACAGCAAGCTTTACTTCGAAGAAGTGCTACT CGTACTTCCAAGTACATGCGATGTCTGCAGTACACACACATCACCAGGTG CACATTCCCCAGCCACGTAGGCAAAACGTCTCGCGGAGCTCGCACAGTCT ACCGTTCCCGGCTGCAATTGACCCTTTCAGTATTCACCGGCACCGATATC ACACCCCTACAGGCAAACGACGGAAACGGGAGGAGAGAGGGACGGGCTGA ATGCGTCTTTGAAAGGAGAGGAGCCGTCCGCCCTTGGACAAGGACCAGGC ACAGGAGGAAGTGCGGCGGCATCAGCGGCACTGTCGGCCCCGGTCATGGC GCTGGCCGTGGTGGGGGGCGTTGCCGCCAACCAAGAGGTTCGCCGCCGGC TGGAGGTGAGAGTGCTCGGTATCCATGGCACAAGATTGCGATCGCTGTTT GTGGTGCCCGGGTCGCCCTATGAAGAACGCACCGGATGGCCGTGAAATTT GACAAGCGGAAGAGCTCGATGAGTACGTTCATTTGCGCTATTGTATAGAG TTCATGTCACAGCATCACGTGGACCGAGCAACAGGTCAATCGATATTTGA AAAAAAAACTATTTGGGCAAAAAAACTCGCACGTAGAGTATGTGCCATGG TTGGCGCTCGGACGTCTTGCGAAGGTTCCACACCGCGGACATCTACAGCT ATTGGCGTTTTTAGTGTACGCAACTGATTTGGCCGAATTCGTGTACAAAC CCGAGATGGTGTCGCAACTACATAAAGTAGTTGGGTGGCTTCATCTAAGT AGTTGGAACTACCAACTACTGTAGTTGTTTTAGTATCGCTGGGACATGAA GAGGTGGACTCACAAGAGGTGGAGATTGGGGCTACGCTTAGTTGCCCAAA GCAGTTGTAGTTGTCCGAGGTGTGGAAGGTTCTCTGTGCAGAGTCGCTGG AGTGGATTTGACGGCTTCGCGATTCCTTGTGCACCCGACTCCTTCTAACT CCGTTTGGAACTGCCGCTTGTACAGCGCAGCTCACGGCTCCTCCCCGCGC GCCCTCCCTCCTCCATCTCGCTGCCCATCACCGCCACCGCCACCGCCGCC GCCACCACCACCATCATCGCTACCACCACCACCGCTGCCACCACCATCAC AACCGGTCGCTATCACGAACACCATCGCACCTGCCGCCCTTACCACGACC ACCCAGTGATGGAATATCTCAGCAAGTCAACCTGTTTATCGACAGTACTG ATCTATTTGCGTAGTAGATAAGCGGCGAGTTCCAGGCCCCGTGCCGAAAC GCTCCTACCGAGACGGGACTCAACGAAGCCCTTCTTCCCCTCGCAGAGCA AGAAGTACTTACCTATATATCTATCGATAGTCGATATTCGATAGTTTGAC CCACACTTAATCCAAGCGGTTGGTAACGCCACCCGCAAAATGAGTCAAGC CCGATAGCTATCTACTGATCGATATTCCATCAATGTGACCACTGCTGCCG CCGCCACCACCACCACTACCACCACCACCACCGCCAGGCTTTGTGTGCGG CGCAGAGCCCGGCCTGGCGTATGGCGGTGCCTCCCGCCCGCCTCTGCACC GACAACGGGGTGATGGTAGGGTGGACAGCGATAGAGCGCCTGCGGCAAGG CATGTCTAATGTTCCGGCGTCTCAGGGGGTGTACCCGCGCCTGCCGCTTG GCCCGGCTTCGGCTGCTGCCACCGCGAGCTAGGCTGGGGCTGGTTGGTTT TCAGGATTCTTCTTCCGAGGCCTGCGTTGTTCTGTGTTGTTTCTCTTCCG AGGCTCGCCCCGAGTTCCAGTTTTCCGAGGGCTTGGGGCACGTGTGTGGT GTCATTTTGACGCGACGACTGTACGACGACCAAGTGCTTTACCTCGAATT AGGTACAGTGTGCACTAGTGGGCCTGCCTGCACCCTGGCGGTGCCCGGCA CACTACTGTACGGAGTACTCGTACTACATAGTGTACGGTAGTGACGTCGC GTGCTGCATGCACGGTAGTCGAGAGCGCCTGGTAGCCCGAGTGAGTGAGG CTTACAGCCAATAACATACTTCATACTCGAAGTAGTATTGTGTACGAGTA GGCATTTGCTACATATTGACAGGAACAACACAGGGCGAGGCGCAGGCCAC GTAACTAAAGACCTCAACAGTGGCCGTGGCCCTTCCTTAGAGTATACTTC TAGCTCGCCAGGGGAACCTGGTTTGGGGAAGGGGAGAAGTACAGTACGAG GAGGATGAGCGCCGACTGTAGTACAGTAGTACAGTAGTACTCTAACGGTA GCCCGTGCTCTTCGGCGGCCGAGGACATGTCGCCCAACGACGTCAAAGGC GCCCCAGGACCAGGGTCAGATCTCACTTAACCATGGCTTCAATGACGTAA CGATGGCATCATGAGCGACC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig91:219058..229227-

>mRNA_S-ischiensis_contig91.20904.1 ID=mRNA_S-ischiensis_contig91.20904.1|Name=mRNA_S-ischiensis_contig91.20904.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1692bp|location=Sequence derived from alignment at S-ischiensis_contig91:219058..229227- (Schizocladia ischiensis KU_0333)
ATGCCTACTGGGACGGTAGCTGCGCTGTCTGGGCTCCCGGACCTTGGTCG
GCCCTTCACGGTGCTGGGCATCGAGACAAGCTGCGATGATACAGGGGCGG
CGGTGGTGCGTTCGGACGGGGTGGTGCTAGGAGAGATGCCTACTGGGACG
GTAGCTGCGCTGTCTGGGCTCCCGGACCTTGGTCGGCCCTTCACGGTGCT
GGGCATCGAGACAAGCTGCGATGATACAGGGGCGGCGGTGGTGCGTTCGG
ACGGGGTGGTGCTAGGAGAGGTGGTGGCAGGACAGGCCCAGATCCATGAG
CGCTGGGGTGGAGTGGTCCCGTCCCTGGCCATGGAGGCCCACAAGGAGCG
CATGGAAGGCGTTATCACGGCGGCTCTCCAGGGAGCGGGCATGTCCTCCG
CTAAGGAGGTGGACGCCATCGCTGTCACGGTGGTGGCAGGACAGGCCCAG
ATCCATGAGCGCTGGGGTGGAGTGGTCCCGTCCCTGGCCATGGAGGCCCA
CAAGGAGCGCATGGAAGGCGTTATCACGGCGGCTCTCCAGGGAGCGGGCA
TGTCCTCCGCTAAGGAGGTGGACGCCATCGCTGTCACGGTGGGCCCGGGT
CTGGAGATCTGCCTGCGCGTGGGCTGCGAGAAGGCAAAGTCCCTAGCCTC
CAAGCTGGGCAAGCCCTTCGTGGCCGTGCACCACCTAGAGGCGCACACAC
TCCTGGCCCGGCCACGCCTGACCCTCCCACCCCGCAAGGAGAAAGGAGGG
GAGCGGGCGGCGGTGCCGGGGGCGGCAGCGTCAGGGGGGGCGAGGAGGGC
GGGTGAGGGAGGAGGGGAGGGGGCCACGGCGCCGGCGGCGGAGGCAGCAG
CAGGGGGGGCGGGGTTTGTGGCAGGGGAGCGGGGGGCACAGGCACCATCG
GAGGGAGGGGAGGGGGCTGCGGTACCGGCGGCGGCGGCAGCAGGGGAGGT
GGGGTTGGTGGCGGGGGAGCAGGGGGCACAGGCACCATCGGGAGAAGTGC
AACAACGCCCGACCAAGGCGACGTCGGCGGATGTGCAAGGGGTCGTTTCG
CCAGGCGGGGAGTTGCAGGTAACCATGGCACAATAGTGGGCCCGGGTCTG
GAGATCTGCCTGCGCGTGGGCTGCGAGAAGGCAAAGTCCCTAGCCTCCAA
GCTGGGCAAGCCCTTCGTGGCCGTGCACCACCTAGAGGCGCACACACTCC
TGGCCCGGCCACGCCTGACCCTCCCACCCCGCAAGGAGAAAGGAGGGGAG
CGGGCGGCGGTGCCGGGGGCGGCAGCGTCAGGGGGGGCGAGGAGGGCGGG
TGAGGGAGGAGGGGAGGGGGCCACGGCGCCGGCGGCGGAGGCAGCAGCAG
GGGGGGCGGGGTTTGTGGCAGGGGAGCGGGGGGCACAGGCACCATCGGAG
GGAGGGGAGGGGGCTGCGGTACCGGCGGCGGCGGCAGCAGGGGAGGTGGG
GTTGGTGGCGGGGGAGCAGGGGGCACAGGCACCATCGGGAGAAGTGCAAC
AACGCCCGACCAAGGCGACGTCGGCGGATGTGCAAGGGGTCGTTTCGCCA
GGCGGGGAGTTGCAGGTAACCATGGCACAATACCCAAATATCGACAAAAA
TATCGAAATATCGATGCCGAGCTTCAAAACGCCGTCCCAAATATCGACAA
AAATATCGAAATATCGATGCCGAGCTTCAAAACGCCGTGAGA
back to top