mRNA_S-ischiensis_contig91.20888.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig91.20888.1
Unique NamemRNA_S-ischiensis_contig91.20888.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A835Z2X6_9STRA (Gtr1/RagA G protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2X6_9STRA)

HSP 1 Score: 338 bits (866), Expect = 1.430e-112
Identity = 165/195 (84.62%), Postives = 179/195 (91.79%), Query Frame = 2 
Query:  158 MGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            MGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAF QFQIWDFPGD D +GEL YGG  ++E++IFG  +A VLVIDAQDEPY+EAV RLVE VRRAQ +NPN+ FEVFIHKVDGDLFLSDEHK+DCQRDIQ YI EE+NDA +DVS+SYYLTSIYDHSIFEAFSKVVQKL+PQLPTLENLLNCLIS
Sbjct:    1 MGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFVQFQIWDFPGDVDLRGELSYGGQPVSEQVIFGASSALVLVIDAQDEPYQEAVMRLVEIVRRAQAVNPNISFEVFIHKVDGDLFLSDEHKIDCQRDIQQYITEELNDANLDVSLSYYLTSIYDHSIFEAFSKVVQKLVPQLPTLENLLNCLIS 195
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A485LVW5_9STRA (Aste57867_24885 protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485LVW5_9STRA)

HSP 1 Score: 333 bits (853), Expect = 1.430e-110
Identity = 168/233 (72.10%), Postives = 189/233 (81.12%), Query Frame = 2 
Query:   50 ELTW--NGQDESTVLSHEYGEGTNDASLHAGLKPRILLMGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            E+ W  N   +   LSH + +G   A L    KPRILLMG RRSGK+SIQRVVF+KMSPHETLFLE TN+LDIKY+ANN+F QFQIWDFPGDFDFK +LVYGG  + EEMIFG C A V VIDAQD+PY EA++RL +TV RA   NPN+FFEVFIHKVDGDLFLSD+HK+DCQRDIQ  I EEI D  +D+ MS+YLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN LIS
Sbjct:    2 EMAWGDNSYADGYSLSHGFDDGDGSA-LSGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDFKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYVEALARLHDTVARAHRYNPNIFFEVFIHKVDGDLFLSDDHKIDCQRDIQQQITEEIQDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIS 233
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A067CD50_SAPPC (Uncharacterized protein n=5 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CD50_SAPPC)

HSP 1 Score: 327 bits (839), Expect = 1.830e-108
Identity = 161/231 (69.70%), Postives = 187/231 (80.95%), Query Frame = 2 
Query:   50 ELTWNGQDESTVLSHEYGEGTNDASLHAGLKPRILLMGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            ++ W        +S  + +G +  SL    KPRILLMG RRSGK+SIQRVVF+KMSPHETLFLE TN LDIKY+ANN+F QFQIWDFPGDF+FK +LVYGG  + EEMIFG C A V VIDAQDEPY +A+SRL +TV RA   NPN+FFEVFIHKVDGDLF+SD+HK+DCQR+IQ  + +EIND  +D+ MS+YLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN LIS
Sbjct:    2 DMAWGDNSYGYSMSQGFDDGES-GSLSGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNTLDIKYIANNSFVQFQIWDFPGDFEFKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDEPYSDALSRLHDTVTRAHHYNPNIFFEVFIHKVDGDLFVSDDHKIDCQREIQQQVLDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIS 231
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A2D4CEL7_PYTIN (Ras-like GTP-binding protein n=36 Tax=Oomycota TaxID=4762 RepID=A0A2D4CEL7_PYTIN)

HSP 1 Score: 327 bits (838), Expect = 2.850e-108
Identity = 162/228 (71.05%), Postives = 185/228 (81.14%), Query Frame = 2 
Query:   59 WNGQDESTVLSHEYGEGTNDASLHAGLKPRILLMGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            WN    S       G G +  +L    KPRILLMG RRSGK+SIQRVVF+KMSPHETLFLE TN+LDIKY+ANN+F QFQIWDFPGDFDFK +LVYGG  + EEMIFG C + V VIDAQDEPY EA++RL +TV RA   NP++FFEVFIHKVDGDLFLSD+HK+DCQR+IQ  I +EIND  +D+ MS+YLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN LI+
Sbjct:    5 WNENSYSESYPMSQGYGDDAPALTGENKPRILLMGLRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDFKEDLVYGGQLVNEEMIFGNCGSIVFVIDAQDEPYAEALARLHDTVLRAHRYNPDIFFEVFIHKVDGDLFLSDDHKIDCQREIQQQITDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILIT 232
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A6V3AJ62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3AJ62_HETAK)

HSP 1 Score: 315 bits (806), Expect = 2.210e-103
Identity = 158/234 (67.52%), Postives = 186/234 (79.49%), Query Frame = 2 
Query:   41 MAEELTWNGQDESTVLSHEYGEGTNDASLHAGLKPRILLMGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            MA    + G+D  T   +E     +D ++    KPRIL+MG RRSGK+SIQRVVF KMSPHETLFLEST+ LDIK VANN F QFQIWDFPGD+DF+G+LVYGG  I E  +FG CAA +LVIDAQ EPY +A +RLVE  RRA   NP + FEV +HKVDGDLFLSDEHK+DCQRDIQ Y+ EE+NDA +++++SYYLTSIYDHSIFEAFSKVVQK+IPQLPTLENLLN LI+
Sbjct:    1 MASFSQYYGEDLETSDRYE-----DDGAISVANKPRILVMGARRSGKSSIQRVVFNKMSPHETLFLESTSDLDIKLVANNPFVQFQIWDFPGDYDFRGDLVYGGQLIDEAAVFGQCAALILVIDAQGEPYPDACARLVEVARRAHGHNPRIAFEVLVHKVDGDLFLSDEHKIDCQRDIQQYMTEELNDANLNINLSYYLTSIYDHSIFEAFSKVVQKIIPQLPTLENLLNLLIT 229
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A3R6XB41_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XB41_9STRA)

HSP 1 Score: 310 bits (794), Expect = 1.400e-101
Identity = 161/243 (66.26%), Postives = 186/243 (76.54%), Query Frame = 2 
Query:   17 LQRPGDCGMAEELTWNGQDESTVLSHEYGEGTNDASLHAGLKPRILLMG-PRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            + +  DC M +E + +         H   + T+  SL    KPRILLMG  RRSGK+SIQRVVF+KMSPHETLFLE TN+LDIKY+ANN+F QFQIWDFPGDFDFK +LVYGG  + EEMIFG C A V VIDAQD+PY EA++RL +TV RA   NPN+FFEVFIHKVDGDLF+SD+HK+DCQRDIQ  I EEI D  +D+ MS+YLTSI     FEAFSKVVQKLIPQLPTLENLLN LIS
Sbjct:   73 ISKSMDCEMTDEDS-DHHPVPVFKRHRTFDDTDGGSLSGENKPRILLMGLRRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDFKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYSEALTRLHDTVARAHRYNPNVFFEVFIHKVDGDLFISDDHKIDCQRDIQQQITEEIQDGDLDIHMSFYLTSI-----FEAFSKVVQKLIPQLPTLENLLNILIS 309
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A3R7B2N6_9STRA (UBC core domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B2N6_9STRA)

HSP 1 Score: 310 bits (794), Expect = 2.600e-100
Identity = 161/243 (66.26%), Postives = 186/243 (76.54%), Query Frame = 2 
Query:   17 LQRPGDCGMAEELTWNGQDESTVLSHEYGEGTNDASLHAGLKPRILLMG-PRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            + +  DC M +E + +         H   + T+  SL    KPRILLMG  RRSGK+SIQRVVF+KMSPHETLFLE TN+LDIKY+ANN+F QFQIWDFPGDFDFK +LVYGG  + EEMIFG C A V VIDAQD+PY EA++RL +TV RA   NPN+FFEVFIHKVDGDLF+SD+HK+DCQRDIQ  I EEI D  +D+ MS+YLTSI     FEAFSKVVQKLIPQLPTLENLLN LIS
Sbjct:  100 ISKSMDCEMTDEDS-DHHPVPVFKRHRTFDDTDGGSLSGENKPRILLMGLRRRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDFDFKDDLVYGGQLVNEEMIFGNCGAIVFVIDAQDDPYSEALTRLHDTVARAHRYNPNVFFEVFIHKVDGDLFISDDHKIDCQRDIQQQITEEIQDGDLDIHMSFYLTSI-----FEAFSKVVQKLIPQLPTLENLLNILIS 336
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A662WWQ1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWQ1_9STRA)

HSP 1 Score: 304 bits (779), Expect = 2.650e-100
Identity = 147/194 (75.77%), Postives = 169/194 (87.11%), Query Frame = 2 
Query:  170 RSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLISVSL 751
            RSGK+SIQRVVF+KMSPHETLFLE TN+LDIKY+ANN+F QFQIWDFPGD+DFK +LVYGG  + EEMIFG C + V VIDAQDEPY EA++RL +TV RA   NP++ FEVFIHKVDGDLFLSD+HK+DCQR+IQ  I +EIND  +D+ MS+YLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN LI+V L
Sbjct:    6 RSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDFKDDLVYGGQLVNEEMIFGNCGSIVFVIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITVGL 199
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: A0A662Y1U3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1U3_9STRA)

HSP 1 Score: 305 bits (780), Expect = 6.710e-99
Identity = 160/248 (64.52%), Postives = 185/248 (74.60%), Query Frame = 2 
Query:   98 YGEGTNDASLHAGLKPRILLMGPRR------------------------SGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKG------ELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLISVSL 751
            YG+ T   +L    KPRILLMG RR                        SGK+SIQRVVF+KMSPHETLFLE TN+LDIKY+ANN+F QFQIWDFPGD+DFKG      +LVYGG  + EEMIFG C + V +IDAQDEPY EA++RL +TV RA   NP++ FEVFIHKVDGDLFLSD+HK+DCQR+IQ  I +EIND  +D+ MS+YLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLN LI+V L
Sbjct:   13 YGDETT--ALTGENKPRILLMGLRRYGSACTCPGQGGKHTYVGLVDCDRSGKSSIQRVVFHKMSPHETLFLEGTNSLDIKYIANNSFVQFQIWDFPGDYDFKGLAAMADDLVYGGQLVNEEMIFGNCGSIVFIIDAQDEPYAEALARLHDTVTRAHRYNPDILFEVFIHKVDGDLFLSDDHKIDCQREIQQQIMDEINDGELDIHMSFYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNILITVGL 258
[Close]
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Match: F0WY86_9STRA (Raslike GTPbinding protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WY86_9STRA)

HSP 1 Score: 301 bits (770), Expect = 5.120e-98
Identity = 145/207 (70.05%), Postives = 173/207 (83.57%), Query Frame = 2 
Query:  122 SLHAGLKPRILLMGPRRSGKTSIQRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGELVYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPNMFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLTSIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLIS 742
            +L+    PRILLMG RRSGK+SIQRVVF+KMSPHETLF E T++LDIKY+ANN F QFQIWDFPGDF+FK +L+YGG  + E+MIF  C + V+VIDAQDEPY EA++RL + + RA   N  +FFEVFIHKVDGDLF+SD+HK+DCQR+IQ  I EEIND  +D+ MS+YLTSIYDHSIFEA SKVVQKLIPQLPT+ENLLN LI+
Sbjct:   26 TLNGEYTPRILLMGLRRSGKSSIQRVVFHKMSPHETLFSEGTSSLDIKYIANNPFVQFQIWDFPGDFEFKDDLMYGGQLVNEDMIFSNCGSIVIVIDAQDEPYTEALARLHDIILRAHRYNSEIFFEVFIHKVDGDLFISDDHKIDCQREIQHQIMEEINDTELDIHMSFYLTSIYDHSIFEAVSKVVQKLIPQLPTMENLLNILIT 232
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig91.20888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2X6_9STRA1.430e-11284.62Gtr1/RagA G protein conserved region-domain-contai... [more]
A0A485LVW5_9STRA1.430e-11072.10Aste57867_24885 protein n=3 Tax=Aphanomyces TaxID=... [more]
A0A067CD50_SAPPC1.830e-10869.70Uncharacterized protein n=5 Tax=Saprolegniaceae Ta... [more]
A0A2D4CEL7_PYTIN2.850e-10871.05Ras-like GTP-binding protein n=36 Tax=Oomycota Tax... [more]
A0A6V3AJ62_HETAK2.210e-10367.52Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A3R6XB41_9STRA1.400e-10166.26Uncharacterized protein (Fragment) n=2 Tax=Aphanom... [more]
A0A3R7B2N6_9STRA2.600e-10066.26UBC core domain-containing protein n=6 Tax=Aphanom... [more]
A0A662WWQ1_9STRA2.650e-10075.77Uncharacterized protein (Fragment) n=1 Tax=Nothoph... [more]
A0A662Y1U3_9STRA6.710e-9964.52Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
F0WY86_9STRA5.120e-9870.05Raslike GTPbinding protein putative n=2 Tax=Albugo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig91contigS-ischiensis_contig91:50322..55113 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score327.0
Seed ortholog evalue8.3e-87
Seed eggNOG ortholog112098.XP_008614151.1
Preferred nameRRAGD
KEGG koko:K16186
KEGG Pathwayko04140,ko04150,map04140,map04150
GOsGO:0000166,GO:0000228,GO:0000287,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000785,GO:0000790,GO:0001101,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005764,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006396,GO:0006725,GO:0006807,GO:0006914,GO:0006915,GO:0006950,GO:0006995,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007264,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008340,GO:0008380,GO:0009056,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010506,GO:0010507,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0012501,GO:0012505,GO:0015630,GO:0016020,GO:0016021,GO:0016049,GO:0016070,GO:0016237,GO:0016241,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0018130,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022402,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032006,GO:0032007,GO:0032008,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034198,GO:0034448,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042594,GO:0043085,GO:0043087,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043200,GO:0043201,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043547,GO:0043562,GO:0044087,GO:0044088,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045786,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046872,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051020,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051726,GO:0060255,GO:0061919,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0072657,GO:0072665,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902115,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1903432,GO:1903506,GO:1903508,GO:1903778,GO:1904262,GO:1904263,GO:1990131,GO:1990253,GO:1990928,GO:2000112,GO:2000785,GO:2001141
EggNOG free text desc.regulation of TORC1 signaling
EggNOG OGsKOG3887@1,KOG3887@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons8
Model size872
Cds size822
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig91.20888.1prot_S-ischiensis_contig91.20888.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig91 50362..55103 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817413.058014-UTR-S-ischiensis_contig91:50321..503611622817413.058014-UTR-S-ischiensis_contig91:50321..50361Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 50322..50361 +
1695741096.0144136-UTR-S-ischiensis_contig91:50321..503611695741096.0144136-UTR-S-ischiensis_contig91:50321..50361Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 50322..50361 +
1622817413.1616433-UTR-S-ischiensis_contig91:55103..551131622817413.1616433-UTR-S-ischiensis_contig91:55103..55113Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 55104..55113 +
1695741096.139692-UTR-S-ischiensis_contig91:55103..551131695741096.139692-UTR-S-ischiensis_contig91:55103..55113Schizocladia ischiensis KU_0333UTRS-ischiensis_contig91 55104..55113 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817413.0701995-CDS-S-ischiensis_contig91:50361..503921622817413.0701995-CDS-S-ischiensis_contig91:50361..50392Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 50362..50392 +
1695741096.030961-CDS-S-ischiensis_contig91:50361..503921695741096.030961-CDS-S-ischiensis_contig91:50361..50392Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 50362..50392 +
1622817413.0821092-CDS-S-ischiensis_contig91:50561..506611622817413.0821092-CDS-S-ischiensis_contig91:50561..50661Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 50562..50661 +
1695741096.0408278-CDS-S-ischiensis_contig91:50561..506611695741096.0408278-CDS-S-ischiensis_contig91:50561..50661Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 50562..50661 +
1622817413.092632-CDS-S-ischiensis_contig91:51438..515051622817413.092632-CDS-S-ischiensis_contig91:51438..51505Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 51439..51505 +
1695741096.0528617-CDS-S-ischiensis_contig91:51438..515051695741096.0528617-CDS-S-ischiensis_contig91:51438..51505Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 51439..51505 +
1622817413.1034486-CDS-S-ischiensis_contig91:51829..519231622817413.1034486-CDS-S-ischiensis_contig91:51829..51923Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 51830..51923 +
1695741096.06842-CDS-S-ischiensis_contig91:51829..519231695741096.06842-CDS-S-ischiensis_contig91:51829..51923Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 51830..51923 +
1622817413.1141841-CDS-S-ischiensis_contig91:53044..531301622817413.1141841-CDS-S-ischiensis_contig91:53044..53130Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 53045..53130 +
1695741096.081445-CDS-S-ischiensis_contig91:53044..531301695741096.081445-CDS-S-ischiensis_contig91:53044..53130Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 53045..53130 +
1622817413.1260676-CDS-S-ischiensis_contig91:53484..535831622817413.1260676-CDS-S-ischiensis_contig91:53484..53583Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 53485..53583 +
1695741096.100685-CDS-S-ischiensis_contig91:53484..535831695741096.100685-CDS-S-ischiensis_contig91:53484..53583Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 53485..53583 +
1622817413.139068-CDS-S-ischiensis_contig91:54361..544941622817413.139068-CDS-S-ischiensis_contig91:54361..54494Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 54362..54494 +
1695741096.1132145-CDS-S-ischiensis_contig91:54361..544941695741096.1132145-CDS-S-ischiensis_contig91:54361..54494Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 54362..54494 +
1622817413.1499999-CDS-S-ischiensis_contig91:54891..551031622817413.1499999-CDS-S-ischiensis_contig91:54891..55103Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 54892..55103 +
1695741096.1267226-CDS-S-ischiensis_contig91:54891..551031695741096.1267226-CDS-S-ischiensis_contig91:54891..55103Schizocladia ischiensis KU_0333CDSS-ischiensis_contig91 54892..55103 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig91.20888.1

>prot_S-ischiensis_contig91.20888.1 ID=prot_S-ischiensis_contig91.20888.1|Name=mRNA_S-ischiensis_contig91.20888.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=274bp
MAEELTWNGQDESTVLSHEYGEGTNDASLHAGLKPRILLMGPRRSGKTSI
QRVVFYKMSPHETLFLESTNALDIKYVANNAFAQFQIWDFPGDFDFKGEL
VYGGNTITEEMIFGTCAACVLVIDAQDEPYREAVSRLVETVRRAQTINPN
MFFEVFIHKVDGDLFLSDEHKMDCQRDIQGYIAEEINDAGIDVSMSYYLT
SIYDHSIFEAFSKVVQKLIPQLPTLENLLNCLISVSLTVLGRVLCKQIAS
RTKPRAFMPCCLRSTPPSCTSDH*
back to top

mRNA from alignment at S-ischiensis_contig91:50322..55113+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig91.20888.1 ID=mRNA_S-ischiensis_contig91.20888.1|Name=mRNA_S-ischiensis_contig91.20888.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4792bp|location=Sequence derived from alignment at S-ischiensis_contig91:50322..55113+ (Schizocladia ischiensis KU_0333)
CTGGGGAGTCCCTGCGTTGCAGAGGCCAGGTGACTGCGGGATGGCGGAAG
AATTAACCTGGAACGGCCAAGGTAACGGCTGTCCTGGATAACAAGCGGCT
GTGATGGCTCCCACTGCTGCAGGCCGTTGTGTTCAGCATGCGGTCCTGGT
AAAAACGTGTGCAATAGCATGAGCTCTGGCTGGCTTCTGACCTCTTTCCT
GCCGCACCAACCTCAATCGTTTGCCTGATTCTCTGTACAGACGAATCTAC
GGTCCTGTCTCACGAATATGGGGAGGGCACCAACGACGCATCGCTGCATG
CGGGGCTGAAACCTCGCATCTTACTAATGGGGCCCAGAAGGTGAGCATCC
ACTAAGAGATGCTAATACAACAGGCTGTATCGGTGTGTGCTTGGGCTGAC
ATAAGCGATAGATCGTAGGTATGCATGCCCAGGACAACCAATTCCCATGG
GGCCCCTATAACAAAAAACAGTGAGTGATTGCAAGCTTGCACTAACTCTC
GGCGCTCGTTTAGTCGAGTGGTCCAGGAACGGGTTCATATCCCGAAGGTC
GCGGTTTCGAATCCCAGTGGGGCGCGATTTTCCGCAAAAATGGGCCTTTC
ATGAACACAGGCGCAAGAAAGATGTACGGGTTGCACCGCTTCCTGCCCAT
GACAGCCAATCCTCCGGCGCAAAAATGGGCCTTTCATGAACATAGGCGCA
AGAAAGATGTACGGGTTGATGCACCGCTTCCTGCCCATGACAGCCAATCC
TCCGGCTTGCTCACTCGGTCAAGGGGCGATTGCGTTTGGTAGGGCATGCA
ATGTACTATTTGGAATGTGAAAGCCTGGCACGCTGTGCCAGCAACTTGTA
GGGGTCCAAGCCAATGGCTGGAAGGCTACCCTGCGGGGGCTGGCGGGCAG
TCTAGGAAGTACTGTACTGTAGTATACTGGCCCGATGACTGCTAGCATGC
ACAGGACGCGGTAGCTCCCTCTTCGTCGGGATCACACACACACGCGCGCA
CTCCCAAGTATGTGAGTACGAAGTACTATGTAGAGTAGCAGGCTTACCAC
GGAAACTGTACTGGAACACACATGGACCAACCTTGACCCACACATGGTGT
CGTGCCTTTGTTGGCAGGTCGGGCAAGACGTCCATCCAGAGGGTAGTGTT
CTACAAGATGTCCCCCCACGAGACCCTGTTCCTGGTAAGTGCTTGGAAGT
GCAACAGGACTGGCATGTACTTCAAAGTACTTGCTGCGCAGTGGATGGGT
CACGACCACGTCCCACAAGTGTCCTTTGGTGATCTTGCTCACCGGATGGG
CCGCCTACTGCAAGGAGCTTGTTGTTGGCAACAGAAACCCCCAGCATACC
TTTTTTCCATTGGTCCCGTTGCGCTGCACAACATGGTTTCGATGTGCTCC
GTGCCGTGCCGTGCCTGCAACATCCGGACGCGGTCCTCCCTACCCCCCGA
TACTAACTACTGTAGCTTCCTGCCTCCCCACACTGCTGCCCAATGTGCAT
GTGTTCAGGAGAGCACAAATGCGCTGGACATCAAGTATGTCGCCAACAAC
GCCTTTGCGCAGTTCCAGATATGGGACTTCCCGGGCGACTTTGACTTCAA
GGGTAAGTTAACACCTTACTTACCTCGCTGCCTTTCCGAGTCTCCTAGTG
AGGACGCGGAGGGACCCACTTTGGCTTTGTATACAAGACCATTGAATTGT
AAAATGGGACAACTACTACCTACGAGAACACTCGATCTCACACACGTGCG
ATCCTCGTTACAATTTATATGAATCACCACTGTTTGCTTTGACTCTCCTC
TCGTACAGGGCATGATCTTCTCTCCCAATGTGATGTGTCCAACCCATGCC
CGTAAACTTTTTACCCGGGCCCAACATGCCTGCTTGTGCAACAAATGTGT
GCGTGAATGCGCACGTAGTCTGCGGACAACTGCAGCCCTGCGTCTTTGTC
ACGAATCTGCGCTGGACAAGAGTGCGCGGGGTTCGTTGTGCCAGAGAGTA
CTGCAGTGCACCTCGGAGTTTTTTAATATATAGAGACACCCATGTACAGT
GCTGCGAAGTACAGTGCTACTTAAGCGAGTAGTAATACTTGTACTCAGGA
GCCCCCCTTCTGTGTGGAAATTCGGGTGGTAGAGCGCAGATGCTTTTCGT
GTCGCTGAACTGCCAATGGTTGTATTGTACTACCAGACTGCAAAAGGGCA
AATCCCGTGCTTCAGGGAAGTATTGTAGGCGCAGAAACAAAGTTTGGAGA
AAGGCCATGGCAGGTGTTTTGGCCATTTTACTATACCATTGCAGCTTTGA
CTTACTGGTAAGTGTGGTTGTCCTACACTAGCACTACTCTCGTACTTGTA
CTGTACTGTACTTCATGTGCTTGTGTTAGCTGCATTCGGCCTGTCACCAT
TTTTATAGGCTTGGGAGACAGCCAGTAGTACAGTAGGAAGTACCTAGTAG
AGAACAGTCCAGCATGTGTCCTGGTATGCCAATGTGCTCTGCGATCACGG
CTGCTGGATACTTCCAAGTACTTCATTTGCATATATAGACTCCCATGTAC
TGTCGTATCACACATGGCTACATATATCGCCACAACATGCACATGGATGG
AGGTCATTGCTGATGGTACAATAGTGTGGTTTGTATCTACTTTGAAAATA
TGTAGTGGACTAGTTGATCAGTGCTGTCTCTGTCCTCGCTGCCCACCTCC
CCTGCCGGACCATTTTGAACCAGGGGAACTCGTGTACGGGGGAAATACCA
TAACCGAGGAGATGATTTTCGGTACCTGTGCAGCTTGTGTCTTGGTCATT
GATGCCCAGGTGAGTCAGTGTCCCAACGAAATCACCATGCCCTCGGGGTT
GTCTTGGGCCGACATTGACGGAAGCTGGTGACGTGCAGGAGTCAGCATGT
TTTCTTCTGTTTGCAACCCTGCACAGCCAGGCAGGGCCAGCCGTGCACGT
GAATGTGAACTCGAACCTGGATTGAACGCGTCCAAAGGGCTTGGAGCTGT
CCCGGAAGAGGTACCTAATCATTGCTCGCTGCTTGCTTGTCCCGAAATGA
TGATTGTCTCAATCAAATGCTTGGTGACTTTGTTGCGGTCCTTGGACGTT
ACATGGAAGTTCTCCCCAAGTACTTGATGGTTGTGTGCGTGTGTGTGCAT
AACTGTACCTCAGGATGAGCCCTACCGGGAGGCTGTATCACGCCTGGTGG
AAACGGTGCGGCGGGCGCAGACCATCAACCCCAACATGTTCTTCGAGGTG
TTCATCCATAAGGTGTGTACTTCGAAGTACATTACTGTACTGTACGACCT
CGCCAGTGTGCTGTACTGCTTCCAACCAAAACAAGTCTATCGACACCGAC
TGCTAGTATGTAGGCGTATTTAGCTATGCGCCCCACCTTGTCTCTTGCAG
CGTCCGGCGCAGGTTCTGTTCTGGAGGCGTTTTGCCTAGCCCTCACAGTA
ACGGCTATGCTTGGAAGTACCAGTTTTTCGCATACTTGGCACTATTCTTT
GTCTATATACTTCCAAGTACGTAGAGTAGTCATGTTGGACAAGGTTACCC
CGTGCCCTGTGCAAGCCACCGACCGCTGCCCCCCCAGTACACTCCGCCGT
GCTGGACTTTGATGTGATGTGATGTCAAACTACTGCACATTAGAGTCACA
TCCCATCCCAGCACTCTCCGTGCTGGGCCGCCGACCAGCCCCCGCAGGGT
GCAGGGTATCCTTTCGGCCGTTGGCCTTGCATGCAATGCCTTATATGCAC
GCAATTTTGAAGAAGGAAAACTGTATCCAGTGATTCATATAAGTACCTGG
AATGGCTATCCCACGCCACTACTACTGCATAGCACTTGGGAATGTGCAGC
TTGAAGCAGCCAGGCCAATAGCCAAGCCATTGGCAGGATGTGTGTGTGTC
CAGTGTCTGCAGCTGGTGGCAGTCAATTGCCAACCCGCCCACCGCCCACC
ACACAGCACCACCACCGCCTTCACACACCAGCACAAGTACTGGACCTATC
ACCATGACCTGTATGCGTACCCGTGTGTTGTGTGTGTAAGGTGGATGGAG
ACCTTTTCTTGTCGGATGAGCACAAAATGGACTGCCAGCGCGACATCCAG
GGGTACATTGCGGAGGAGATCAACGACGCCGGCATCGACGTGAGCATGAG
CTACTACCTCACAAGCATTTACGGTGAGCACCGACGTTCGTGAAGCCTTG
TGCTGGCTGTGAGCAGTGACAACTGGATGTGGCATAGCTTGTAAAGGTTT
GAATATTCACGGTTGCGATGCCCAGCAAAGCCCCAAGCTCTTCTCTGACG
ATACTGTAGTACTTCAAAGTATATATACTACTGTTAGTACTGTATGAGTA
TGTATGTACTCACATCGTGCTTGCCATAGCCCCGAGACCAGTGCCCACAC
ACATGGCCCGAGACGGGGCAGGCTACTTCACTACTGTAAGTATGTGTTAC
CTGGCAAGTATCACTGTACTTCGTACTTACACGTGTAGCATTGCGATAGC
TCGCAAGACATGCTTGGCTCAGGCATTGTCTCATGCGGCTCATGTTATGG
TGCCATGTGGTATTCGGCAGATCACAGCATATTTGAGGCCTTCAGCAAGG
TGGTGCAGAAGCTCATCCCACAGCTTCCCACCCTGGAGAACCTGCTCAAC
TGCCTCATCTCGGTGAGCCTTACTGTACTGGGGAGAGTGCTCTGCAAGCA
GATAGCTTCACGTACAAAGCCAAGAGCATTTATGCCTTGTTGTCTGCGCT
CAACACCGCCCTCGTGTACTTCGGACCACTAGTGTACTGTAC
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig91:50322..55113+

>mRNA_S-ischiensis_contig91.20888.1 ID=mRNA_S-ischiensis_contig91.20888.1|Name=mRNA_S-ischiensis_contig91.20888.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1644bp|location=Sequence derived from alignment at S-ischiensis_contig91:50322..55113+ (Schizocladia ischiensis KU_0333)
ATGGCGGAAGAATTAACCTGGAACGGCCAAGATGGCGGAAGAATTAACCT
GGAACGGCCAAGACGAATCTACGGTCCTGTCTCACGAATATGGGGAGGGC
ACCAACGACGCATCGCTGCATGCGGGGCTGAAACCTCGCATCTTACTAAT
GGGGCCCAGAAGACGAATCTACGGTCCTGTCTCACGAATATGGGGAGGGC
ACCAACGACGCATCGCTGCATGCGGGGCTGAAACCTCGCATCTTACTAAT
GGGGCCCAGAAGGTCGGGCAAGACGTCCATCCAGAGGGTAGTGTTCTACA
AGATGTCCCCCCACGAGACCCTGTTCCTGGTCGGGCAAGACGTCCATCCA
GAGGGTAGTGTTCTACAAGATGTCCCCCCACGAGACCCTGTTCCTGGAGA
GCACAAATGCGCTGGACATCAAGTATGTCGCCAACAACGCCTTTGCGCAG
TTCCAGATATGGGACTTCCCGGGCGACTTTGACTTCAAGGGAGAGCACAA
ATGCGCTGGACATCAAGTATGTCGCCAACAACGCCTTTGCGCAGTTCCAG
ATATGGGACTTCCCGGGCGACTTTGACTTCAAGGGGGAACTCGTGTACGG
GGGAAATACCATAACCGAGGAGATGATTTTCGGTACCTGTGCAGCTTGTG
TCTTGGTCATTGATGCCCAGGGGAACTCGTGTACGGGGGAAATACCATAA
CCGAGGAGATGATTTTCGGTACCTGTGCAGCTTGTGTCTTGGTCATTGAT
GCCCAGGATGAGCCCTACCGGGAGGCTGTATCACGCCTGGTGGAAACGGT
GCGGCGGGCGCAGACCATCAACCCCAACATGTTCTTCGAGGTGTTCATCC
ATAAGGATGAGCCCTACCGGGAGGCTGTATCACGCCTGGTGGAAACGGTG
CGGCGGGCGCAGACCATCAACCCCAACATGTTCTTCGAGGTGTTCATCCA
TAAGGTGGATGGAGACCTTTTCTTGTCGGATGAGCACAAAATGGACTGCC
AGCGCGACATCCAGGGGTACATTGCGGAGGAGATCAACGACGCCGGCATC
GACGTGAGCATGAGCTACTACCTCACAAGCATTTACGGTGGATGGAGACC
TTTTCTTGTCGGATGAGCACAAAATGGACTGCCAGCGCGACATCCAGGGG
TACATTGCGGAGGAGATCAACGACGCCGGCATCGACGTGAGCATGAGCTA
CTACCTCACAAGCATTTACGATCACAGCATATTTGAGGCCTTCAGCAAGG
TGGTGCAGAAGCTCATCCCACAGCTTCCCACCCTGGAGAACCTGCTCAAC
TGCCTCATCTCGGTGAGCCTTACTGTACTGGGGAGAGTGCTCTGCAAGCA
GATAGCTTCACGTACAAAGCCAAGAGCATTTATGCCTTGTTGTCTGCGCT
CAACACCGCCCTCGTGTACTTCGGACCACTAGATCACAGCATATTTGAGG
CCTTCAGCAAGGTGGTGCAGAAGCTCATCCCACAGCTTCCCACCCTGGAG
AACCTGCTCAACTGCCTCATCTCGGTGAGCCTTACTGTACTGGGGAGAGT
GCTCTGCAAGCAGATAGCTTCACGTACAAAGCCAAGAGCATTTATGCCTT
GTTGTCTGCGCTCAACACCGCCCTCGTGTACTTCGGACCACTAG
back to top