mRNA_S-ischiensis_contig90.20857.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 395 bits (1016), Expect = 1.060e-119 Identity = 241/583 (41.34%), Postives = 334/583 (57.29%), Query Frame = 3
Query: 384 PTVTEAEKGAAWFRLVVAGIMLTLGPWAMLSFYRARYVLDIRTRSAGLVALAGISIIITFVVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRRN-------------RGGQVTVLLRCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRITSHYIISXXXXXXXXXASRSAVTGNPR-DRPTQPTPAPAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGSPLL--RGMVHYRRGIADDRRSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYST---VQATMPERTADQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETMTAMADSP 2075
P+ +K A RL + + LG +A++ FYR+R++LDIRTRSA LV L G+S++++ +VTVN + ++W+ +DWFW SLLLFFV+P GSYI RA RLAVVF+P+A+ LPWLIPERNY+ LL A + L+IPIYHE TL++W+ IPKQ +L+ + AV+L +YPFIR VDD+FNIS EL V V + V + ++ ++GG Q+W+ +N V +FCIS++ P+R+L DPLAATKRNYA RVLLSR R G+ + ++ T A +G T A+ SAV G+ T APR TWK + T G +G+ + G R + RG + ++VWDFERL TP+LAAAFE ++++ALC ESV FL+EVSRY + DY+T T P QF F +IT T+I GAP+EVNIS D++ IL+ Y G +F + EERR++F ++Y+EV+ MLE NLL+RF+ + +FK VR QRE + AM DSP
Sbjct: 54 PSYNRTDKALALVRLGLGCCFIVLGTYALVRFYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIVVVTIVQEVVDKWGGNFEQRWLTSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGRSSRIV-----DDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKV------------ATSSAVVGSGVITTSTADANVVAPR---TWKGREMTIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAGTCPT----QFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNE-EERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 611
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI) HSP 1 Score: 378 bits (971), Expect = 1.870e-114 Identity = 230/534 (43.07%), Postives = 298/534 (55.81%), Query Frame = 3
Query: 513 RSAGLVALAGISIIITFVVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRRNRGGQVTVLL-----RCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRITSHYIISXXXXXXXXXASRSAVTGNPRDRPTQPTPAPAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGS--------PLLRGMVHYRRGIADDRRSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYSTVQATMPERTADQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETMTAMADSP 2075
RSA LV + G+ +++T VV VN S ++W+ +DWFW SLLLFF++P GSYI RA RLAVVFHP+A+R LPWLIPERNY++ LL V ++IPIY E TL++WEIIPKQ +L ++ FAV LA +YPFIR VDD+FNISKEL V V + +AV K A E+GG Q+W+ N A +F IS+++P+R+L DPLAATKRNYA RVLLSR V R K + S+ + S +T + D T A A TW + N SN + G+ P R RRG R P ++VW+FERLA TP+LA AFE ++++ALC ESV FL EVSRY DY+T + QF F +IT T+I G+P+EVNIS +DK+RIL+ Y G F + EERRLIFG+AY+EV+ MLE NLL+RF+ + FK VR QRE + M DSP
Sbjct: 3 RSAHLVMVEGVCVLLTMVVAVNGSINVVWDSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLAVVQKAAAEWGGVYEQRWVGNNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTAGDVSNVVASAV-------VGNGVITTSTAD--TNDAVA-----AGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRG-GGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDVNE-EERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSP 520
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 366 bits (939), Expect = 7.870e-109 Identity = 234/581 (40.28%), Postives = 322/581 (55.42%), Query Frame = 3
Query: 381 APTVTEAEKGAAWFRLVVAGIMLTLGPWAMLSFYRARYVLDIRTRSAGLVALAGISIIITFVVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKEL---TAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRRN------RGGQVTVLLRCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRITSHYIISXXXXXXXXXASRSAVTGNPRDRPTQPTPAPAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGSPL---LRGM--VHYRRGIADDRRSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYS-TVQATMPERTADQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETMTAMADSPN 2078
AP+ T +K A RL V + LG A++ FYR++++LDIRTRSA LV + G++ I+T +VTVN+S ++W+ DWFW SLLLFF++P GSYI RA RLAVVFHP+ +R LPWLIPE NY++ LL A V L+IPIYHE TL +W+ I KQ ++L+ + AV LA +YPFIR VDD+F+IS EL TA +VL + V G ++ G ++W A N V + +F +S+I P+R+L DPLAAT+ NYA+RVL +R R + L C +A G+ T S ++ T + A AP TW + TN + SN G+ L RG + RG RRS + + +WDFER+ TP+LA AFE +++KALC ES FL+EVSRY +GDY+ +A+ QF F +IT T+I G+P+EVNIS +++ IL YH G F + EERR+IF +AY+ V+ MLE NLL RF+ + FK V Q+E M DSP+
Sbjct: 42 APSYTRTDKALALVRLGVGCCFIVLGTCALVRFYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVWDIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIVLITSEEVDG----QWWGPYERRWFANNMSVVFMIILFGVSIIAPLRRLASDPLAATRHNYANRVLPNRTEPHSTARRASGFSSGLDCESSMMCSEREDETTLEEGKLG-----EALATGITTTEREGGSAGYVAASATIGKAVTTSS-----ADANGAVAPH---TWTDREPTNSSVVTTATWFVSNDNGAGGNRLDGVRRGQSEIGLDRGRDGGRRSRSHKQDIDIWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNE-EERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSPH 604
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 344 bits (883), Expect = 3.120e-102 Identity = 210/565 (37.17%), Postives = 294/565 (52.04%), Query Frame = 3
Query: 384 PTVTEAEKGAAWFRLVVAGIMLTLGPWAMLSFYRARYVLDIRTRSAGLVALAGISIIITFVVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRRNRGGQVTVLLRCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRITSHYIISXXXXXXXXXASRSAVTGNPRDRPTQPTPAPAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGSPLLRGMVHYRRGIADDRRSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYST-VQATMPERTADQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETMTAMADSP 2075
P+ T +K A FRL V + LG A+ FYR + +LDIRTRSA LV + G++ I+T +VTVN++ ++W+ DWFW+SL LFF++P G YI RA RLAVVFHP+ +R LPWLIPERNY++ LL A V L+IPIYHE TL +W+ I KQ +L+ + AV LA +YPFIR VDD+F+IS EL V + + ++ +GG ++W+A N + + +F +S++ P+R+L DP AAT+RNYA+RVL ++ GN D +RG S RG RG RRS + + +WDFER+ TP+LA AFE ++++ALC ES FL+EVSRY +GDY+T ++A+ QF F +IT T+I G+P+EVNIS +++ IL YH G F + ERR+IF +AY+ V+ MLE NLL RF+ + FK + Q+E M DSP
Sbjct: 43 PSYTRTDKALALFRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIWDTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIGLITIVQEIDGLWGGCYERRWLANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDH----------------------------------------------------------------TEPHSIGGNRLD-----------------------------AVRRGQSERGD-------------DRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVND-AERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSP 500
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 322 bits (825), Expect = 1.290e-93 Identity = 213/544 (39.15%), Postives = 289/544 (53.12%), Query Frame = 3
Query: 513 RSAGLVALAGISIIITFVVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMV-LQLAVAVSGKLAREFGGAEA---QKWIATNAQF---VAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSR--------------RNRGGQVTVLLRCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRITSHYIISXXXXXXXXXASRSAVTGNPRDRPTQPTPAPAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGSPLL--RGMVHYRRGIADDRRSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYSTVQATMPERTADQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETMTAMADSP 2075
RSA LV L G+S++ + +VTVN++ ++W+ +DWFW SLLLFFV+P GSYI RA RLAVVF+P+A+R LPWLIPERNY+ LL A + L+IPIY E TL++W+ IPKQ +L+ + AV+L +YPFIR VDD+FNISKEL V V + + + E+ Q T +F ++ + SV+ P+R+L DPLAATKRNYA RVLLSR GG ++ T A +G T S S + G AP P WK + T G +G+S+ G R + RG + ++VWDFERL TP+LAAAFE ++++ALC ESV FL+EVSRY + DY+T QF F FIT T+I GAP+EVNI ++ IL+ Y G +F + EERR++F ++Y+ V+ MLE NLL+RF+ + +FK VR QRE + AM DSP
Sbjct: 19 RSAHLVTLQGVSLLFSMLVTVNDATTIVWDSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVTVTIAVVTCEAHSFVHRSTHVESCLQQHVPPTTKRFPYPMSPSNLSTRSVVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGGSSRIV------DDSEDEVAFEDEELGGVPGFDTTAAAGVGGGSTGKVATSAVVGSGVITTSSADANG---------AVAPCP-----WKGRELTIANGSTSVPKGSSSTGKRRDAVQRGQRGRGXXXXXXXXXXXXXSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNE-EERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 537
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI) HSP 1 Score: 245 bits (625), Expect = 1.580e-70 Identity = 117/203 (57.64%), Postives = 149/203 (73.40%), Query Frame = 3
Query: 564 VVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSR 1172
+ VN + ++W+ +DWFW SLLLFFV+P GSYI RA RLAVVFHPKA+R LPWLIPERNY+ L+ A L+IP+YHE TL++WEIIPKQ D+L +SI FAVV A +YPFIR VDD+F+ISKEL V + +AV KL ++GG ++W+ N + A VF +SV++P+R+L FDPLAATKRNYA RVLLSR
Sbjct: 2 LAAVNGAINIVWDSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLAVGQKLEGDYGGVYERRWLGNNLFLLFAAVVFSVSVVDPLRRLAFDPLAATKRNYADRVLLSR 204
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 251 bits (640), Expect = 1.920e-70 Identity = 173/513 (33.72%), Postives = 237/513 (46.20%), Query Frame = 3
Query: 540 GISIIITFVVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRRNRGGQVTVLLRCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRITSHYIISXXXXXXXXXASRSAVTGNPRDRPTQPTPAPAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGSPLLRGMVHYRRGIADDRRSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYSTVQ-ATMPERTADQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETMTAMADSP 2075
G++ I+T +VTVN++ ++W+ DWFW+SLLLFF++P GSYI RA RLAVVFHP+ +R LPWL+PERNY++ LL + V L+IPIYHE TL +W+ I KQ +L+ + AV LA +YPFIR VDD+F+IS EL V A G + T+RNYA+RVL ++ GN D +RG + RG RG RRS + + +WDFER+ TP+LA AFE ++++ALC ES FL+EVSRY +GDY+T + A+ QF F +IT T+I G+ +EVNIS +++ IL YH G F + EERR+IF +AY+ V+ MLE NLL RF+ + FK + Q+E M DSP
Sbjct: 4 GVAGILTMLVTVNDATTVIWDTGFDWFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIV------TATIGLI------------------------------------------TTTRRNYANRVLPDH----------------------------------------------------------------TEPHSIGGNRLD-----------------------------AVRRGQTERGD-------------DRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNV-EERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSP 361
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 252 bits (643), Expect = 1.340e-69 Identity = 182/527 (34.54%), Postives = 254/527 (48.20%), Query Frame = 3
Query: 513 RSAGLVALAGISIIITFVVTVNESARLLWEESVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRRNRGGQVTVLLRCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRITSHYIISXXXXXXXXXASRSAVTGNPRDRPTQPTP-APAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGSPLLRGMVHYRRGIADDR----RSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYST-VQATMPERTADQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETMTAMADSP 2075
RSA LV + G+ ++T +VT+N S ++W+ +D+FW SLLLF V P GSYI R RLAVVFHP+A+R LPWLIP AG Y ++ L FAV LA +PFIR VDD+F+ISKE+ V + +A+ + ++GG ++WI + + +F +S+++P+R+L FDPLAAT+ N+A+R+LLSR V R + Q GV + + +A+ PT A AP TW + TN SN + G V RG DR RS + ++VWDFER+ASTP+LAAAFE ++++ALC ESV FL+EVSRY + +Y +A+ QF F +IT T+I G+ +EVNI R+IF +AY +V+ MLE NL+ RF+ + FK VR QRE M AM SP
Sbjct: 3 RSAYLVMVEGVCALLTMLVTLNSSINVVWDCGLDYFWVSLLLFLVVPTLLGSYICRVLRLAVVFHPRAKRALPWLIPGGRSD-----AGY-------YPDDDLS-----------------AFAVALACTFPFIRNVDDLFSISKEIIIVTAAVVILAIEQNVVDKWGGVYERRWIDKSVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSV----RRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAP---CTWNEREPTNSSVVAEGSSSVSNDNSTRGRRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI----------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSP 465
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE) HSP 1 Score: 246 bits (628), Expect = 1.580e-67 Identity = 185/521 (35.51%), Postives = 257/521 (49.33%), Query Frame = 3
Query: 534 LAGISIIITFVVTVNESARLLWEE--SVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRRN-RGGQVTVLLRCYXXXXXXXXXXXXXXXXXXXXXXXTCKAQCIGVRI-------TSHYIISXXXXXXXXXASRSAVTGNPRDRPTQPTPAPAPRRALTWKRKPQTNVKGGLMSQRGASNRGARSGSPLLRGMVHYRRGIADDRRSYPNSIVLQVWDFERLASTPMLAAAFEQFARKALCQESVQFLAEVSRYVDGDYSTVQATMPERTA----DQFDYFNFITKTYICNGAPDEVNISSSDKQRILDCYHGGLTAFLALPTWEERRLIFGQAYVEVRGMLEDNLLQRFMLSPEFKQVRAQRETM 2054
+AG S+++++V VN+S +LW S+DWFW SLLLF V P+ GSYI RA RLAV+FHP+A++ LPWLIPERN++ L V FL +PIY + TL++W KVDD+FNIS+EL V +L L +A+ K + E W N F VF +SV+ P+R L DPLA +K+ R +L+RR+ R V+ + GV T+ XXXXXXXXX +++ P P+P+P A W+ ++RG +G + +++ WDFERLA P++AAAFE + RKALC E V FL EVSRY GD+ PE Q+ F I +I G+ +EV+IS +++R+++ H G F A T EERRL+F +AY+EV+ MLEDNLL+RF+ + FK VRAQR M
Sbjct: 1 MAGSSMVVSYVAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLEVW-----------------------------KVDDLFNISRELIIVTILFLILAIGIKCGLYY---EVDMWTGGNLNFFITAAVFGVSVVGPLRLLAVDPLAGSKQRCMDRAVLARRDTRSEDVSYSAKATADIRGSSRAVRVASRKLEEGLYGD------GVDENDDDGCDTTPXXXXXXXXXXXXXXXATSLYDEPPPANLSPSPSPGDPGAGNWQ----------YQGINFCTSRGGGAGXXXXXXXXXXXXXXXXEE-------MVEAWDFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDF-------PEPAGLSGPSQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKGDVLFEA-GTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQRRMM 458
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI) HSP 1 Score: 202 bits (514), Expect = 6.840e-54 Identity = 103/216 (47.69%), Postives = 143/216 (66.20%), Query Frame = 3
Query: 534 LAGISIIITFVVTVNESARLLWEE--SVDWFWSSLLLFFVTPVYTGSYIARATRLAVVFHPKARRRLPWLIPERNYIISLLFAGVCFLSIPIYHEETLQIWEIIPKQLDLLENISIGFAVVLASLYPFIRKVDDMFNISKELTAVMVLQLAVAVSGKLAREFGGAEAQKWIATNAQFVAAVCVFCISVIEPMRKLMFDPLAATKRNYASRVLLSRR 1175
+AG S++++++ VN+S +LW S+DWFW SLLLF V P+ GSYI RA RLAV+FHP+A++ LPWLIPERN++ L V L IPIY + TL++WE+I KQ+DLL + ++ A LA ++PFIRKVDD+FNIS+EL V +L L +A+ K F E W N F VF +SV+ P+R+L DPLA +K+ R +L+RR
Sbjct: 1 MAGSSMVVSYLAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSAMAVALLIIPIYQDMTLEVWEVIAKQVDLLASATLVLAGTLACIFPFIRKVDDLFNISRELIIVTILFLILAIGIKCGLYF---EVDMWTGGNLNFFITAAVFGVSVVGPLRRLAVDPLAGSKQRCTGRAVLARR 213 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20857.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig90.20857.1 >prot_S-ischiensis_contig90.20857.1 ID=prot_S-ischiensis_contig90.20857.1|Name=mRNA_S-ischiensis_contig90.20857.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=636bp MSYPGAPPGVDTGGGGDSSASDSSGYGGFGYGGFGTEGDSSAYGGYGSFGback to top mRNA from alignment at S-ischiensis_contig90:170526..191973+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig90.20857.1 ID=mRNA_S-ischiensis_contig90.20857.1|Name=mRNA_S-ischiensis_contig90.20857.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=21448bp|location=Sequence derived from alignment at S-ischiensis_contig90:170526..191973+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig90:170526..191973+ >mRNA_S-ischiensis_contig90.20857.1 ID=mRNA_S-ischiensis_contig90.20857.1|Name=mRNA_S-ischiensis_contig90.20857.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=3816bp|location=Sequence derived from alignment at S-ischiensis_contig90:170526..191973+ (Schizocladia ischiensis KU_0333)back to top |