mRNA_S-ischiensis_contig90.20855.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig90.20855.1
Unique NamemRNA_S-ischiensis_contig90.20855.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.910e-45
Identity = 127/356 (35.67%), Postives = 171/356 (48.03%), Query Frame = 2 
Query:  482 ASVFAGETLERWIVENITFVGSPFVFWVSVVEPMRKLYYDPLAATKRKYAQRVLLSRSAA-------------------------------RRGESGG--------------------------------------------------SSTHQESNATVSNDDALDS--------------------------------QQEV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEASQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            A+ + G   +RW+  NI+   +  +F +S+V+P+R+L  DPLAATKR YA RVLLSR+A                                  G+ GG                                                  +S   + +++VSND ++                                  + EV +FERLA TP+LA AFE ++++ALC ESVLFL EVSRY   DY++          SQF  FCY T TF+  G+PEEVNISDADK+RIL+ Y  G   F ++ + E RRLIF +AY+EV+SMLEANLLRRF++T+ FK VR +RE V  M DSP
Sbjct:  166 AAEWGGVYEQRWVGNNISIFIAAVLFGISIVDPLRRLAMDPLAATKRNYADRVLLSRTAPDSTVRTASGVSSGRSRDPSRIRANSEEEARLEEGDLGGVLDKDETTTAGDVSNVVASAVVGNGVITTSTADTNDAVAAGTWNEREPINTSVFTKQSSSVSNDTSIGGNRRDVVQRGPRERAFFRGRRGGGGGRGRPEREEMEVWNFERLARTPLLAVAFEDYSKRALCHESVLFLTEVSRYQHEDYATPTKDAIRSSPSQFGTFCYITNTFIKAGSPEEVNISDADKKRILELYQKGEEHFEDV-NEEERRLIFGRAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQTMMDSP 520
[Close]
BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: D7G2T5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T5_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.050e-43
Identity = 90/156 (57.69%), Postives = 116/156 (74.36%), Query Frame = 2 
Query:  746 EV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEA-SQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            EV +FERLA TP+LAAAFE ++++ALC ESVLFL+EVSRY   DY+++    ++    +QF  FCY T TF+  G+PEEVNISDADK+ ILD Y  G  +F  + + E RR+IF  AY+EV+SMLEANLLRRF++T+ FK VR +RE V AM DSP
Sbjct:  118 EVWNFERLARTPLLAAAFEDYSKRALCHESVLFLSEVSRYQSDDYATSARPSSESSCPTQFGTFCYITDTFIKGGSPEEVNISDADKKAILDVYHKGEESFGGV-NEEDRRMIFSPAYLEVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSP 272
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BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 4.700e-42
Identity = 109/267 (40.82%), Postives = 152/267 (56.93%), Query Frame = 2 
Query:  467 LWGYLASVFAGETLERWIVENITFVGSPFVFWVSVVEPMRKLYYDPLAATKRKYAQRVLLSRS-----------AARRGESGGSSTHQESNATVSNDDALDSQQEV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEA--SQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSPTRNNSV 1228
            LWG       G    RW+  N++ +    +F VS+V P+R+L  DP AAT+R YA RVL   +           A RRG+S             S     D   ++ DFER+  TP+LA AFE ++++ALC ES LFL+EVSRY  GDY++   R + G +  +QF  FCY T TF+  G+PEEVNISD +++ IL  Y  G   F ++   E RR+IF +AY+ V+ MLEANLL RF++T+ FK +  ++E    M DSP +   V
Sbjct:  251 LWG-------GCYERRWLANNLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHSIGGNRLDAVRRGQSERGDDRGRDGGRRSRSHKQDI--DLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATT-IRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAE-RRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSLEMQKENTQVMVDSPPQARVV 506
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BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 9.820e-42
Identity = 129/361 (35.73%), Postives = 168/361 (46.54%), Query Frame = 2 
Query:  461 VQLWGYLASVFAGETLERWIVENITFVGSPFVFWVSVVEPMRKLYYDPLAATKRKYAQRVLLSRS---------------------------------------------AARRGESGGS-------------------------------------------STHQESNATVSNDDALDSQQ-----------------------EV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEASQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            V  WG       G   +RW+  NI+ V    +F +S+V P+R+L  DPLAATKR YA RVLLSR+                                              A  G  GGS                                           S  + S +T    DA+   Q                       EV DFERL  TP+LAAAFE ++++ALC ESVLFL+EVSRY   DY++          +QF  FCY T TF+  GAPEEVNISD D++ IL+ Y  G  +F E+ + E RR++F ++Y+EV+SMLEANLLRRF++T++FK VR +RE V AM DSP
Sbjct:  260 VDKWG-------GNFEQRWLTSNISVVFVAVLFCISIVAPLRRLALDPLAATKRNYADRVLLSRTESHSTRSASGISPERAGRSSRIVDDSDDEVAFEDEELGGVPGMDTTAAAGVGGGSTGKVATSSAVVGSGVITTSTADANVVAPRTWKGREMTIANGSTSVPKGSGSTGKRRDAVQRGQRGRGXXXXXXXXXXXXPSDREEMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATP-TNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEV-NEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 611
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BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 3.020e-35
Identity = 82/157 (52.23%), Postives = 111/157 (70.70%), Query Frame = 2 
Query:  740 QQEV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEASQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            + EV DFERL  TP+LAAAFE ++++ALC ESVLFL+EVSRY   DY++          +QF  FC+ T TF+  GAPEEVNI    ++ IL+ Y  G  +F E+ + E RR++F ++Y+ V+SMLEANLLRRF++T++FK VR +RE V AM DSP
Sbjct:  386 EMEVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEV-NEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKSVRKQRENVQAMMDSP 537
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BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 3.050e-33
Identity = 79/154 (51.30%), Postives = 106/154 (68.83%), Query Frame = 2 
Query:  755 DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEA--SQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            DFER+  TP+LA AFE +++KALC ES LFL+EVSRY  GDY+ A  R + G +  +QF  FCY T TF+  G+PEEVNISD +++ IL  Y  G   F ++ + E RR+IF +AY+ V+ MLEANLL RF++T+ FK V  ++E    M DSP
Sbjct:  452 DFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMA-TRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDV-NEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKSVEMQKEDTQVMVDSP 603
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BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 4.170e-29
Identity = 80/157 (50.96%), Postives = 102/157 (64.97%), Query Frame = 2 
Query:  746 EV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEA--SQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            EV  FERLA TP+LA AFE ++++ALC ESVLFL+EVS Y   DY++ Q R + G +  +QF   CY T TF   G+PEEVN SDADK+ I +              N+     F  AY++V+SMLEANLLRRF++T+ FK VR +RE V AM DSP
Sbjct:  483 EVWSFERLARTPLLAVAFEDYSKRALCHESVLFLSEVSWYQNDDYAT-QTRASSGSSCPTQFGTLCYITDTFTKAGSPEEVNTSDADKKAIFE--------------ND-----FSLAYLKVKSMLEANLLRRFLNTDRFKSVRMQRENVQAMMDSP 619
[Close]
BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: D7FTV9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 1.360e-28
Identity = 71/156 (45.51%), Postives = 95/156 (60.90%), Query Frame = 2 
Query:  746 EV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSS-AQARKTDGEASQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            EV DFER+ASTP+LAAAFE ++++ALC ESVLFL+EVSRY   +Y    +A        QF +FCY T TF+  G+PEEVNI                            R+IF +A+ +V++MLEANL+ RF++T+ FK VR +RE + AM  SP
Sbjct:    2 EVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNI----------------------------RMIFSRAHRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSP 129
[Close]
BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE)

HSP 1 Score: 126 bits (317), Expect = 2.740e-27
Identity = 73/159 (45.91%), Postives = 100/159 (62.89%), Query Frame = 2 
Query:  755 DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEASQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARR-----ETVTAMADSPTR 1216
            DFERLA  P++AAAFE + +KALC E VLFL EVSRY  GD+            SQ+ AFC     F+  G+ EEV+IS  +++R+++    G +  +E  + E RRL+F +AY+EV++MLE NLLRRF+ T+ FK VRA+R     E    +A SP R
Sbjct:  318 DFERLARKPLVAAAFEAYTRKALCHECVLFLREVSRYQSGDFPEPAGLSGP---SQYQAFCRINDVFIRPGSREEVSISGVERKRLMELAHKG-DVLFEAGTEEERRLVFARAYLEVKTMLEDNLLRRFLQTDRFKSVRAQRRMMQRENFPTVAASPHR 472
[Close]
BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Match: D7FTW1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 1.530e-26
Identity = 110/364 (30.22%), Postives = 155/364 (42.58%), Query Frame = 2 
Query:  461 VQLWGYLASVFAGETLERWIVENITFVGSPFVFWVSVVEPMRKLYYDPLAATKRKYAQRVLLSR--------------------SAARRGES-----------------------GG-----------------------------------------SSTHQESNATVSNDDALDSQQ-----------------------------EV*DFERLASTPMLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSS-AQARKTDGEASQFDAFCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLIFDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSP 1210
            V  WG       G    RWI ++++ +    +F VS+V+P+R+L +DPLAAT+  +A R+LLSR                    S   RG+S                       GG                                         SS   E +++VSND++   ++                             EV DFER+ASTP+LAAAFE ++++ALC ESVLFL+EVSRY   +Y    +A        QF +FCY T TF+  G+ EEVNI                            R+IF +AY +V++MLEANL+ RF++T+ FK VR +RE + AM  SP
Sbjct:  137 VDKWG-------GVYERRWIDKSVSILFVAVLFGVSIVDPLRRLAFDPLAATQHNHANRILLSRTEPHNSVRRELGFSSVIGGGSQRTRGDSEEEARLEEGQREGVPGKDTTTAAGGDGDTGDVPTSAAIGRGATTAPTADADGAVAPCTWNEREPTNSSVVAEGSSSVSNDNSTRGRRGAFQRVQRARGSGRDRGCSSRSRSDREEMEVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNI----------------------------RMIFSRAYRDVKNMLEANLVLRFLNTDRFKNVRVQRENMKAMMGSP 465
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7G2T7_ECTSI1.910e-4535.67RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G2T5_ECTSI1.050e-4357.69RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW0_ECTSI4.700e-4240.82RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
D7G2T8_ECTSI9.820e-4235.73RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LEP9_9PHAE3.020e-3552.23RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JE98_9PHAE3.050e-3351.30RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LA03_9PHAE4.170e-2950.96RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTV9_ECTSI1.360e-2845.51RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L7K1_9PHAE2.740e-2745.91RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW1_ECTSI1.530e-2630.22RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:138856..147786 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score60.5
Seed ortholog evalue7.9e-07
Seed eggNOG ortholog2880.D7G0P6
EggNOG free text desc.Regulator of G protein signaling domain
EggNOG OGs2D0MX@1,2SERP@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons7
Model size2091
Cds size450
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817409.2536032-UTR-S-ischiensis_contig90:138855..1394221622817409.2536032-UTR-S-ischiensis_contig90:138855..139422Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 138856..139422 +
1695741093.1745613-UTR-S-ischiensis_contig90:138855..1394221695741093.1745613-UTR-S-ischiensis_contig90:138855..139422Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 138856..139422 +
1622817409.2666512-UTR-S-ischiensis_contig90:140272..1403831622817409.2666512-UTR-S-ischiensis_contig90:140272..140383Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 140273..140383 +
1695741093.185615-UTR-S-ischiensis_contig90:140272..1403831695741093.185615-UTR-S-ischiensis_contig90:140272..140383Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 140273..140383 +
1622817409.2787964-UTR-S-ischiensis_contig90:142645..1427151622817409.2787964-UTR-S-ischiensis_contig90:142645..142715Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 142646..142715 +
1695741093.1957102-UTR-S-ischiensis_contig90:142645..1427151695741093.1957102-UTR-S-ischiensis_contig90:142645..142715Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 142646..142715 +
1622817409.292899-UTR-S-ischiensis_contig90:144298..1443311622817409.292899-UTR-S-ischiensis_contig90:144298..144331Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 144299..144331 +
1695741093.2065573-UTR-S-ischiensis_contig90:144298..1443311695741093.2065573-UTR-S-ischiensis_contig90:144298..144331Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 144299..144331 +
1622817409.3575723-UTR-S-ischiensis_contig90:146926..1477861622817409.3575723-UTR-S-ischiensis_contig90:146926..147786Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 146927..147786 +
1695741093.2560098-UTR-S-ischiensis_contig90:146926..1477861695741093.2560098-UTR-S-ischiensis_contig90:146926..147786Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 146927..147786 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817409.3078835-CDS-S-ischiensis_contig90:144331..1444111622817409.3078835-CDS-S-ischiensis_contig90:144331..144411Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 144332..144411 +
1695741093.2170255-CDS-S-ischiensis_contig90:144331..1444111695741093.2170255-CDS-S-ischiensis_contig90:144331..144411Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 144332..144411 +
1622817409.3208475-CDS-S-ischiensis_contig90:145279..1454081622817409.3208475-CDS-S-ischiensis_contig90:145279..145408Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 145280..145408 +
1695741093.2274554-CDS-S-ischiensis_contig90:145279..1454081695741093.2274554-CDS-S-ischiensis_contig90:145279..145408Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 145280..145408 +
1622817409.3340838-CDS-S-ischiensis_contig90:146178..1462621622817409.3340838-CDS-S-ischiensis_contig90:146178..146262Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 146179..146262 +
1695741093.235904-CDS-S-ischiensis_contig90:146178..1462621695741093.235904-CDS-S-ischiensis_contig90:146178..146262Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 146179..146262 +
1622817409.345622-CDS-S-ischiensis_contig90:146769..1469261622817409.345622-CDS-S-ischiensis_contig90:146769..146926Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 146770..146926 +
1695741093.244693-CDS-S-ischiensis_contig90:146769..1469261695741093.244693-CDS-S-ischiensis_contig90:146769..146926Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 146770..146926 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20855.1prot_S-ischiensis_contig90.20855.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig90 144332..146926 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig90.20855.1

>prot_S-ischiensis_contig90.20855.1 ID=prot_S-ischiensis_contig90.20855.1|Name=mRNA_S-ischiensis_contig90.20855.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=150bp
MLAAAFERFAQKALCQESVLFLAEVSRYAEGDYSSAQARKTDGEASQFDA
FCYTTTTFVCNGAPEEVNISDADKRRILDCYGGGWNAFWELPSNEHRRLI
FDQAYVEVRSMLEANLLRRFMSTEEFKEVRARRETVTAMADSPTRNNSV*
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mRNA from alignment at S-ischiensis_contig90:138856..147786+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig90.20855.1 ID=mRNA_S-ischiensis_contig90.20855.1|Name=mRNA_S-ischiensis_contig90.20855.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=8931bp|location=Sequence derived from alignment at S-ischiensis_contig90:138856..147786+ (Schizocladia ischiensis KU_0333)
GGGAGGTCCTGAATTGTCCCGAAAGCCCTTGGAAAAGTTCCCCCAGGTCC
TGAGGGAGATTTTTCCGAGTTTTTGCTTGCGCGAATCCGACCAGTATTTG
GCGAATAAAGTTCTCCTGAAAATTGGCATGGGGGGGCAACATCTCTCCGA
CGATTGCGGTACGCGGATACATGGGGAGGCAACATCTCTCCGACGATTGA
GGTACTCGGATACATCAACACAAACACAGGCAGTGACAGAGTAGGCAGAA
CCACCACACCGCGTACCTGCAGCGGAGAAGTGAACGAACAGGGAGCACCG
TGTGAGCGCGAGACCCCTGTACCGCAATCACCACGCACCGTGGTGACACC
AGCCTCTTCCCTCTGTTAAATTGGACTTACACACCGAAACCAGTCGAGCC
CGATAGCTATCTACTTATCGATATTCCATCACTGCCTCGCGCTGCTGCCA
CTCTGTGCCCGTCCAGTTGTGGGGGTACTTAGCGAGCGTGTTTGCGGGCG
AAACGCTGGAGAGGTGGATTGTGGAAAACATCACCTTTGTGGGGTCGCCC
TTCGTGTTCTGGGTTAGGTGAGTACCGGAGACCCGGCCGAGGGGTGGAGG
GGAGAAACATGAGCAGGAGGGGGGGAGGAGGAGGAGGGAGGCGGAGGATG
AGAAGGAGGAGGAGGAGGAGGAAGGGGGGAGAGGGAGGGGAAGGGGGGGA
GGAGGAGAAGGCGGAGGAGGAGGAGGAGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGGGGGGGGGAGGAGGAGGCGGAGGCGACGTGTCAATTCATG
CAGAGACTGCAGAGGGCGCCTGCGGGGCCAGTGAATGCACACACAAGTCT
GCACTGTACTGTACTGTTCTGTGCTGTACTGTACTGTACTGTACTGTCCT
GCACCTACTGGAGCACTACTGTACCGTAGGACCGTAGCATGTACAGCAGC
ACTCGAGTACTTGGACGCGGAGTGTTGTACTACTTAGCAACTACAGTACA
GTACCGTACACGTGCTTTCTACCAAGCACTGCGTACGATACTAAGTACTT
TGCAGCAGCACCACTGCGCGGTACAGTGCAGTACAGTGCAGCAGACGCAA
AGGAACTACTGCACTCCTTACCGTTGTCCTGTACGGTACATGTGCATGCA
GACGCGTGCCTGCAGCACATGCTGCAATGCCGTTGTGTGGAGTGAGGCCG
CCACAATGTCGAGAGCCGCTGCTGCTACCGTCGTCACCGCCAACGCTGGC
TGCCCCATGCTGCTGCTGCTGCTGCTGCTGCTGCTACCACCCCCGCCTAT
GCCACTGCTCCTCCTGCTGCTGCTGCCCCCCCCACCTATGCCACTGCTCC
TGCTCCTGCTCCTGCTGCTGCTGCTGCCCCCCCCCGCCAATTATGCCGCT
GCTCCCGCTCTGTCAAGTGTGGTGGAGCCCATGAGGAAGCTGTACTACGA
CCCCCTGGCCGCGACCAAGCGAAAGTACGCACAGCGGGTCTTGCTCAGCC
GCTCCGCCGCCAGGAGGGGCGAAAGCGGGTGAGTCGGATGTTATATGTAC
TTCGAAGTACAGTACATTAGAAGTCTGATGTGATGTGATGTCACACGACT
GTATGTACAGTGCACTAGAGTGTGCACATCTCATCAAATCACGTCCACAT
GGGCGATTGGGTGAGTCTGATGTGGTGTGATGCCACACTGCGTACAGTAC
ATGGCTTAGAGCGCGAACACCGCTTCAAATGGCGGAAGCTACAGCTGACC
AGCGAGCCACGAGAGGGAGCAAAGACGAGGAGGATCGTTCGGGTCCAGGG
CGTGCACAGAGATGAGAAACATCGTCCGAACGTGAGTACACACACATTGC
GTCAAATCGCCACATGGGCGATTGTTGGGCTGCGCAGCGCGTAACGGCAT
TTTCCCATACCGGACACCTTCATTCTTAGCAGTTTGTGGCGGGCGGGGGG
GGGCGCCCGCGCCCATCGGGGGCGCCAGGATCTGGGCGCGCCAGTCCGAT
TTCGCCGGACCTCACCCACTCCTGGGCCCCGCAGGGAGGTTTTTGGGGCG
CAATCTGCTTGCAAGCGGGCTCCAGAGCATCATTTGTTGGGCGCCTGCAG
CGCCCAGCCCCCTTTTTGCTTGGGCGCACGTGGCCCGAAATTTGTTTTTT
TGTGGGGCCGCGCCACCGAAACAAAAGTTGTTGTGGGAAACACCGGCACG
TACTAGGGACGAGAGCGGCGCGTGAGCCTGATGCGATGCAGTCTGAAACG
ATGCGATGTCATGCGTCATGTAACTCGGTGTCATGCCGTGTAAAATGCGG
TGCCATGTTAACACCATTTGGTCCGGCCGAAAATAGGGAAACCCGCCAGG
GTTGTCTGCGACCGCAAAGCCTCAAAAACAACAGGACCGGGGGAAACCGC
CGGGTTTGTCTGCGAGCGCAGTCGAGCTTCCAACCACGTTTTTGATGTCC
CGCTGAGAAGGGCGGGATTTCTTGGCCCCTTTCCTTGCACGCTGGCACGA
AAGCCTCGTTCCCCACCCTGGGTTTTGGGCTCCCGTTTCTGGTCGTTCCG
GCCGTTGATTGGTTGAGGTCGCGAGCAACGCCTGATAAAGTTTAGGTGCC
GCCAGGTTTACCGGCGGGCTTGCTCGGCCCCAAGGGAAGAGCGTGCCTAA
TTATGGTACTGTAAGTACTGCAGAACTGCACATTGCTTGTCAGACCACCA
AGTGCCTAGAGTGCGCATCGCATCACATCAAAACACACGACATCACATCG
AAACACACGACATCACATCGAAACACACGACATCACATCAAAACACACGG
CATCACATCGAAACACACGACATCACATCGAAGTCACATCACAACACACG
ACATCACATCGAAACACACGACATCACATCGAGACACACGACATCACATC
GAGACACACGGCATCACATCGAAACACACGACCTCACATCAAAACACACG
ACATCACATCAAAACACATGACATCACATCAAAACACACGACATCACATC
AAAACACACGACATCACATCAAAACACATGACATCACATCAAAACACACC
ACATCACATCAAAACACACGACGCGCGCCATCACGACTCTCGGTGTCCTG
ATGCACCCGGCGGGCCGAAGCCGGTACAAAAAAAAAAAAAAAAACGCTTC
ACCCCAACCCTCCTGTGGGAAGAACGCGCTCGTCGGAGAGAGAGAGAGAG
GGAGAGATGGGGGGAAGAGAGAGAGAGAGCGAGAGAGAGAGAGAGGGAGA
GGGAGAGGGAGCGGGAGGGAGCGGGAGGGAGCGGGAGGGAGCGGGAGGGG
GAGGGAGAGGGAGAGGGAGAGAGAGAGAGAGAGGAAGTCCTCGTAAGTAG
TGCAAGTACAATGCGACGAGACAATACCATGCGATAACGTGATGACGCAC
AAATAGAGGAAGGCACCCAACTGGCCCGAAACCGCCCGTACAACGAGGAG
AATAACCGTAACCCAACCCTCCCCAGCCTCGGAAGTCCAGCCCACTGTAC
AGCAGCACATGCAACCCGAAACCACCGCCCTGTTAACCCTTTGCAAACGA
CGGGGCGCTCACCTTTCGCCCCACTAAACTCCCACTTCAAAGTACAGTTT
AGTGTCCCATCGTCAAATATGGGCTAGGCAGATATCAACCGTTTACGGAC
GACGGGGCGCTCATCCGACACTCAAATCATGTACCACTGTAGAAGTTTAG
CGTCCTACAAATAGTTGAATGTCCTCAAAGCGTCTACCTCTTGTGCCCTA
ACCAGCCCCTTGCCGTGCCCCCCCCCGCCCCGCAACTAAGGGGCTCAAGC
ACCCACCAGGAGAGCAATGCTACCGTGAGCAACGACGACGCTCTAGACTC
ACAGCAGGAGGTGAGCCAAGACATGATATCGACCAGTAGATAGTTATCGG
GCTTGACGATTTTGTGGGTGGCGTTACTAACTAATTGGATTTAGTATGGG
TCAAACTATCGAATATCGACTATCGATAGCAAGTAGATTGGTGCTTTCGA
TAAATACTGAAGTAGGTTGATTTGCTTAGGTATTCCATCACTGAAGGCAA
GAGACCAAGACCAGAAGAGAAGAGAAGAGCAGAAGAGTTATCGCGGGGGA
AGGAAGAGCGATAATGCCCCCGCCGGCATGAAAACCCGGCCACCGCAAAA
GGAGAACAAGGATTTCTACTGCAGGCTGTCGAGAGAACAAGGAACGCCCC
CCCCCCCCCCCCAAAAAAAAAAAAAAAAAAAACGAAATGGTTGCCTGGAA
ATGCGACCGCCGTGAACGGAGGAGGAAAGATTCGCTCGGTCGGTCGGTCG
GCCTCGAAGGCCCATGAAGAAAAAATGATAAAACCCCCCCCCCGTGGCAC
GAACGTTCGATTCGACCACCGACTTTGTGCGGTATGTTTGTTTGACTCTG
CAGCAGGCTGATCGACTGCGGGGCCGGGGCGGCGGGGGGCACGGGCTGTG
TTTCTTTACGAGCGCAGTATTCCTTAATGTTTTGTTCTGTTTCACTGTCT
AAGGGCTTCTGGTGAGGTCCCGAGTTTGGGAAAGGGCCTGGGATTCGCAT
GCCATCGAAAATAATCAAAAACAGTATCCGCTTTGAAGTTCCGAGCCCAA
ATAAGCTGCCGTAGCCAACTTTTGGACATGGCCAAAATTTAGGGTTAGGT
TAGGTGAACAGTGTACTGTACGGGTACTGGTGGTTGGGCCTGGCACTGAG
CGGCGCAACCTCTGCCAGCAGTACCAGGCTGCGCTGGGCCCGTGTGCAGC
ACAACCGTGGTGCAGTGAGGTGGGCTGGCTTGGTTTATGCCTCGCGTACA
AGGAGGGTGTGCCAACGCCTGCCGCGTTCTGCGCTATCACTACGTACTTA
GAAATACCTACCAGGGTTGGCACTTAGAGGTTAGTTAGGCTCTATTTAGT
CTTCATTTTAGGTCGAATGTTCCCCAATTACCTCTAGTTAAGGCCCGAAA
AGGGCACCACTTAGGGGTCAAGTGCCAACTGGAATCTGCAATCGGTCGCC
TCCCAGTGCTGTGACTGAGCGTGCACTGTACAGTGCCTACAGTAGAGTAC
TGGAGTTGAAAACGCCTTCCTACTGCTATAGTAGGGAGTTGTTGCAACCC
TCGGAAGGCTGGAGTTGTCGTGCAGAAGGGGTCCAAGGTGCCCTTGAGGT
GCGGATGTTTGCCGCCACGTGCCGCAGCAAATCGCTCGAGGCTTACAATA
TGCTTGGCCGTATGTACCGAAGTACTCTACTCTTGAGATACCAGGGTTGG
CACTTCGAGGTTAATTAGGGCCTATTTAGCCTTCATTGTAGGTCTAATTA
CCCCTAATTACCTCTAATCAAGGGCCTAGAAGGGCACCACTTAGGGGTTA
AGTGCCAACCCTGTGCAATATCACTCTTTGGGGGGGAAGTAACACGAGCA
TGCCCCCCCTCGCTCCTGCCCCTATGTACACTGCCTGTGGCAGGTGTAGG
ACTTTGAGCGGTTGGCGTCCACGCCCATGCTGGCAGCGGCCTTTGAGCGC
TTTGCCCAGAAGGCCCTGTGCCAGGAGTCTGTGCTCTTCCTCGCGGAAGT
GTCCAGGTGAGCACTCCTGTAAGTAGATTTGGGAGACTTGGGAGATGAAA
GCCCTGTGCCGGGAGTCCGTGAGTGACCGGGTGAGCAAGGGGGTCTTGCA
ATGGGTTTGGAATGTGACAATCGGAGATTTGGGAAACGCATGTCCTCCCC
GCGAAGTTTTGTGCGGTCTGCGCTGGACAGTTCATGCTGCTTGCCTATAC
GAGTGGCATACTGCATTAGAGTACTAAGGCTGTCAGGTGCTCAGTACAGT
TGACTTGGGATTGTACTGGTAGAGTACTTCCAAGTACTTGCAAGTGCTTG
CCCTTATACCCGAGTACAGCAATCGAGTACTACTGTACTGCATACAGTAG
TACTTCCGGAAGTGCTACTGTAGTACTAGTGCTACTGTAGTAGTACCCTA
CAACGCTATTGTAATCGCGGTACTACTACGGTAGTAGTATAGTTTTGCTG
TATCAACAGGAACAACACAGGGCGAGGTGCAGGCCACGTCGCTACAGACC
TCAGCAGTGGCCCTTCCTTACAGCTCGCCAGGGGAAAGCGGTATGCGGTT
TGCTGTACTGTAGTGTAGTCAACTACAGTACAATAGCAATTGAGAGTTGA
GGTGAGCGTACCGTGGTGTAGTCCTCGCCGCACTCGGAAGGGAGTACTTT
GAAGTACAAAGTGTGTAGGCATGTACTGGTGACTGCTTGTTATAGGTTGT
CAACTGCTATTTGAAGTGCACTTGTGCCTCGTCTTGTATTTCTGTACGCG
TACACGACTCCCATTTTAGCCATGCATTTGGTCAAATATCCCAACAAGAA
AAGAACTTTCAAAAATCAGGTCCAGTTTGAAAACAATTTAATTCCAAATT
TTAATTATTTTTCATGCTCAACAGGTACGCCGAAGGGGACTACTCCAGCG
CGCAGGCCCGCAAGACGGACGGCGAGGCCAGCCAGTTCGATGCCTTCTGC
TACACCACTACGACCTTTGTGTGCAACGGCGCACCCGAGGAGGTCAACAT
CAGGCAAGTGCTCGCGTACAGTAGAAGGGCAGCACAGTGCAGTACAACAC
AGTACAGTACATCACAGTACAGTACGAGGACGTCAATATCAGGCATGTGC
TCGAGTACATACAATAGGAGGGCAGCACAGTGCAGTACAACACAGTGCAG
TACAACACAGTACAGTACAGTACAGTACAGTACAGTACAACACAGTCAGT
ACAGTACCGTACAAGTACTGTACCGTAGAGTACAGCACAGCCAGCCAGTT
CGACGCCTTCTGCTACACCACTACCACCGTTGTGCTAAATGGCGCACCCG
AGGAGGTCAATATCAGGCGAGAGGTCGTGGCACATAGTACCGCGCAGCTT
GAGTTCCCCTCTATCTTGGTTTTTTTGTGGGTGATTAGCTGTTGTCATGG
CTCGCGAGTTCAGGGCCCCGTCTGTGCCAAACTGGGACCACACCAGAAGA
GGTAGCCATTTTTTCACTCGGTAATCTGATGTGATGTGATGTGCACTCCA
ATTTACTTAGTGTGACATCACATCACATCACATCGCATCAAATTTGGGAC
CTCGCCAATAGAGTTCGCCCTGTTTTTCACTCGGTAGCATCATGTGATGT
GTCGTGTGATGTGCACTCTACAAGAATTTAGCATTTGTCCGTTGCCAGTA
CTTGGGGTCCATTTCATTGGTCCGACGTTTCACCTTGATTGCGTATCTTT
TGTCCATGGTTGAGCGGATGCGGATGCGGCTAGCCGCTCACGAGCATGCC
CCCTAACCCCGCCTCGGCCGCAGTGACGCGGACAAGAGGCGTATTCTGGA
TTGCTACGGCGGCGGGTGGAACGCTTTTTGGGAGCTTCCCAGCAACGAGC
ACAGGAGGTAGGTGACTTTGAACTCTTCTTCCGAGGACACTGCTTTAACT
CTTTTTCAAAGGGCACTGCTTTAACTCTTCTTCCAAGGACACTGCTTTAA
CTCTTCTTCCCAAGGACACTGCTTTTAGCTCTTCGTGAAGGCGGGTGAAA
GGAAGGGCTTCCGGGGGCGAGGCCCCGAACAGTCTCGCGTAGAGTAGAGA
CACCTCTTCTTTGCCACTCGCTTGCTTGTCTTCTTGCAATAAATGCACCA
CGCGCTGCTGACCGTGTTGCTGGCGCCCTGGCGGCGCCCGCGCGCCCGCA
GTCTGCCTGCCCCCCCAGGGTTGGCACTTAACCCCTAAGTGGTGCCCGCT
TAGGCCCTTAATTAGACGTAGTATCAGGAATAACATGGGCCGATGTGCGG
GCCACGTCACTAGAGACCTCAGCAGTGGCCCTTCCTTACAGAGGAATGAA
GACTAATTGGGCCCTAATTAGCCCCTAAGTGTCAACCCTGTGCCCCCCCG
CTGCGATTGTGCAGGCTCATCTTCGATCAAGCATACGTGGAGGTGCGCAG
CATGTTGGAAGCCAACCTGCTCCGGCGCTTCATGAGTACCGAGGAGTTCA
AGGAAGTGCGGGCGCGGCGAGAGACTGTGACCGCTATGGCCGACTCGCCA
ACCAGAAACAACTCCGTGTGATTGATGTCCGGCTTTGGCTCGGAGTTTTT
TTTTTTTCCACCGTGCCCGAAAGAGAAAGATTCTCACGCTCCCGCGCACA
CAATTAATGCAGCATAAGTACTCGCAGTATAGAAACTCCGTGTGGTGCCC
GGTTTTGGCTCTGATTGTTTTTCCACAGTGCCCTAAAGAGAAAGATTCTC
AGGCTCCCGCGCACACAATTCGTGCAGTATGAGCACACGTACTATAGAAA
CTCCATGTGATGCCCGGTTTTTGCTCGGAGCTTTGTTCCACAGCACGGCA
GTACAGTGCGTATGCCCGGGCCGGGAGGTTGGTGTGGGGCATGGCCGGTG
TACCCTGGCACGGGCTCGACATAATATAGGTGTTGTGTAACAAGGTGTGT
TAGCAATCGTCCGCTGCTTGGAAGGGCACGTGCTCCAGCGGCGCGGTTTG
GCGCTTGCGGGTGGTACGGCATCTGCTTCTGTTTTGTGTAAAGCATGCGG
TTTCGAGTGCAGCACTACGTAGTACGGTATCAGTACTGTAGAGTACGTAC
ACTGGGGTAGCGTGCCTTGGGGGTTTTACGGCATCTGCTTGTGTTTGTGT
ACAGCATGCGCTTTCGAGTGTACAGTAGGTACTCTGGGGTAATGGGCCTT
GGGGGTGTTAATGCTGTTGTTTTGTGTGCAGCATGCGCTTTATGTCTGCT
TTGAAGAGTGGCGATTATGATCATATATTAGTTTACTACAGTACTACCAG
GAGGGGGGGGAGGTTTCGGGCCTGCAGTGCCTGAGCCTCGCGGCCCGGTG
AGTCCGAGCCGACCCGCCCGCCGCCCGTGGCTTCCCACTGGCGGCGCTCC
ACTCCCCCCCCTGACAACACAAAGAAAAAAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig90:138856..147786+

>mRNA_S-ischiensis_contig90.20855.1 ID=mRNA_S-ischiensis_contig90.20855.1|Name=mRNA_S-ischiensis_contig90.20855.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=900bp|location=Sequence derived from alignment at S-ischiensis_contig90:138856..147786+ (Schizocladia ischiensis KU_0333)
ATGCTGGCAGCGGCCTTTGAGCGCTTTGCCCAGAAGGCCCTGTGCCAGGA
GTCTGTGCTCTTCCTCGCGGAAGTGTCCAGATGCTGGCAGCGGCCTTTGA
GCGCTTTGCCCAGAAGGCCCTGTGCCAGGAGTCTGTGCTCTTCCTCGCGG
AAGTGTCCAGGTACGCCGAAGGGGACTACTCCAGCGCGCAGGCCCGCAAG
ACGGACGGCGAGGCCAGCCAGTTCGATGCCTTCTGCTACACCACTACGAC
CTTTGTGTGCAACGGCGCACCCGAGGAGGTCAACATCAGGTACGCCGAAG
GGGACTACTCCAGCGCGCAGGCCCGCAAGACGGACGGCGAGGCCAGCCAG
TTCGATGCCTTCTGCTACACCACTACGACCTTTGTGTGCAACGGCGCACC
CGAGGAGGTCAACATCAGTGACGCGGACAAGAGGCGTATTCTGGATTGCT
ACGGCGGCGGGTGGAACGCTTTTTGGGAGCTTCCCAGCAACGAGCACAGG
AGTGACGCGGACAAGAGGCGTATTCTGGATTGCTACGGCGGCGGGTGGAA
CGCTTTTTGGGAGCTTCCCAGCAACGAGCACAGGAGGCTCATCTTCGATC
AAGCATACGTGGAGGTGCGCAGCATGTTGGAAGCCAACCTGCTCCGGCGC
TTCATGAGTACCGAGGAGTTCAAGGAAGTGCGGGCGCGGCGAGAGACTGT
GACCGCTATGGCCGACTCGCCAACCAGAAACAACTCCGTGTGAGCTCATC
TTCGATCAAGCATACGTGGAGGTGCGCAGCATGTTGGAAGCCAACCTGCT
CCGGCGCTTCATGAGTACCGAGGAGTTCAAGGAAGTGCGGGCGCGGCGAG
AGACTGTGACCGCTATGGCCGACTCGCCAACCAGAAACAACTCCGTGTGA
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