mRNA_S-ischiensis_contig90.20852.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig90.20852.1
Unique NamemRNA_S-ischiensis_contig90.20852.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: D7FXG0_ECTSI (ATP-synt_DE_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXG0_ECTSI)

HSP 1 Score: 203 bits (516), Expect = 3.950e-61
Identity = 106/152 (69.74%), Postives = 124/152 (81.58%), Query Frame = 1 
Query:   76 MFGVAARRAAGACRPVLRAPLRAMSTAEEAKGMTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQV 531
            M GVAARR AGA RP LR   R  STAE    M LNFCLPHE IY  K V+QVI+PG+AGEYGVTAGHSPIVAELKPGV+Q++HEAGQ PE FFVSAGFALTH +SVTDITAIEA R+E++DEGAV+ +++ +KREM+ A EG++E A AQV
Sbjct:    1 MLGVAARRVAGAARPALRTA-RCFSTAEAPAVMKLNFCLPHETIYKDKDVDQVIIPGSAGEYGVTAGHSPIVAELKPGVVQVVHEAGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQV 151
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A836CK87_9STRA (ATP-synt_DE_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK87_9STRA)

HSP 1 Score: 157 bits (397), Expect = 2.280e-43
Identity = 87/158 (55.06%), Postives = 114/158 (72.15%), Query Frame = 1 
Query:   76 MFGVAARRAAGACRPVLRAPLRAMSTAEEAK--GMTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQVNYCT 543
            M G A RR+A    P LRA LR MSTAE AK  G+TLNFCLPH+ IY  K V+ VI+PG AG YGVT GHS +++E++PG+++I HEAG  PE +FVSAGFALTH +SVTDITA+EA +++D+D  AV++ F  +K ++  A    KE+ AAQ+   T
Sbjct:    1 MIGHALRRSA----PALRASLRHMSTAEAAKPTGLTLNFCLPHKPIYVDKAVDTVIIPGVAGVYGVTQGHSAVISEMQPGLVKIYHEAGGEPENWFVSAGFALTHPNSVTDITAVEAVKVDDMDPEAVKDTFNQAKSDL-AAASDEKERVAAQIQMST 153
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A4D9CR36_9STRA (ATP-synt_DE_N domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CR36_9STRA)

HSP 1 Score: 146 bits (369), Expect = 3.970e-39
Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 1 
Query:   76 MFGVAARRAAGACRPVLRAPLRAMSTAEEAKGMTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQV 531
            +F +AARR     R +L +   A + A     + LNF LP  +IY  K V  V++PG AGEYGVT  HSP++AELK GV+QI+HE GQAPEKFFVS GFALTHA+SVTDI  +EAA+LED+D   V + +  + ++   A EG+KEK  AQ+
Sbjct:    7 IFQLAARRGVHTTR-ILASTAPAAADASSGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHETGQAPEKFFVSGGFALTHANSVTDIAVVEAAKLEDIDAEEVPKIYAEAMKDYNAAAEGSKEKVEAQI 157
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A6U0LH08_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0LH08_9STRA)

HSP 1 Score: 141 bits (355), Expect = 3.440e-37
Identity = 80/139 (57.55%), Postives = 98/139 (70.50%), Query Frame = 1 
Query:  121 VLRAPLRAMSTAEEAKG-MTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQVN 534
            V R   R MSTAE + G MTLNF LPHE IYS   V QVIVPGAAGEYG+TA H PIVA+LKPGVLQI+HE G  PEK+FV+ GF+LTH +SVTDI+  EA +L+D+D  A+   +E +K     A  G+   A AQ++
Sbjct:   11 VSRRVSRCMSTAEASDGSMTLNFSLPHETIYSEAKVSQVIVPGAAGEYGITADHVPIVAQLKPGVLQIMHEGGD-PEKYFVAGGFSLTHENSVTDISCPEAVKLDDIDPTAISSNYEAAKSAFSSAEAGSIAAAEAQID 148
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A7S2PKN7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKN7_9STRA)

HSP 1 Score: 137 bits (346), Expect = 9.520e-36
Identity = 81/145 (55.86%), Postives = 97/145 (66.90%), Query Frame = 1 
Query:  115 RPVLRAPLRAMSTA---EEAKG--MTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQVN 534
            R V  A  R +S A    EA G  MTLNF LPHE IY+G  V+QVIVPGAAGEYGVTA H P+VA+LK GVLQIIHE G  PEKFFV  GF+LTH +S TDIT  EA + +D+D   V   +E +K     A +G+  KA AQ++
Sbjct:   13 RTVASASSRRLSKAFLSSEAGGSTMTLNFNLPHETIYAGAPVKQVIVPGAAGEYGVTADHVPLVAQLKAGVLQIIHEDGGDPEKFFVPGGFSLTHENSTTDITCPEAVKFDDIDGAVVSSEYEAAKAAFGSAEDGSVAKAEAQID 157
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A6U3TGR8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3TGR8_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.010e-35
Identity = 73/139 (52.52%), Postives = 95/139 (68.35%), Query Frame = 1 
Query:  118 PVLRAPLRAMSTAEEAKGMTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQVN 534
            P L     + + AE +  MTLNF LPHE IY+G TV QVIVPGAAGEYGVTA H P+VA+LK GVLQI+HE+   PEK+FV  GF++TH +SVTDI+  EA +++D+D  AV   FE ++     A  G+  +A A V+
Sbjct:   12 PTLTRRALSSNAAEASSVMTLNFNLPHETIYNGATVSQVIVPGAAGEYGVTADHVPVVAQLKAGVLQIMHESAGEPEKYFVPGGFSITHDNSVTDISCPEAVKVDDIDPAAVSSNFEAARNAYTAAEAGSAAQAEAMVD 150
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A7R9U2Q0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2Q0_9STRA)

HSP 1 Score: 133 bits (334), Expect = 1.010e-33
Identity = 77/132 (58.33%), Postives = 92/132 (69.70%), Query Frame = 1 
Query:  136 LRAMSTAEEAKGMTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQV 531
            LRAMS  E A+G+ LN   P E IYS K V+ VIVPGA GEYGVTAGHSPIVAELK GV+Q++H+     EKFFVS GFAL+H    TDI+A E ARLEDLDE A+R  F  +  ++  A + T  KA AQ+
Sbjct:   49 LRAMSE-EAAEGLKLNLASPSETIYSKKVVDSVIVPGADGEYGVTAGHSPIVAELKAGVVQVLHKGSADAEKFFVSGGFALSHEDDTTDISAPEIARLEDLDENAIRTGFADATTKLSSAGDETA-KAEAQI 178
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A7S1UY04_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UY04_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.660e-31
Identity = 76/140 (54.29%), Postives = 94/140 (67.14%), Query Frame = 1 
Query:  121 VLRAPLRAMST--AEEAKG-MTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQV 531
            V RA  RA S+  A  A G MTLNF LP E +Y+G  V+QVIVPG AGEYG+TA H PIV+ELK GVLQI+H  G+ PEK+FVS GFALTH  S TDI+   A +L+DLD  AV   ++ +K     A  G+  +A AQ+
Sbjct:   10 VRRATARAFSSEAAAPASGKMTLNFSLPDETVYAGAEVDQVIVPGEAGEYGITANHVPIVSELKAGVLQILHGDGE-PEKYFVSGGFALTHDDSSTDISCPVAVKLDDLDSSAVSSNYDAAKSAFASAEAGSIAQAEAQI 148
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A7S1DDA2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DDA2_CYCTE)

HSP 1 Score: 125 bits (314), Expect = 7.560e-31
Identity = 69/136 (50.74%), Postives = 93/136 (68.38%), Query Frame = 1 
Query:  127 RAPLRAMSTAEEAKGMTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQA-PEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQV 531
            R+  R MS+   +  + LNF LPHE IYSG  V QVI+PG+ GEYGV A H P +++LK GVLQIIHE G   PEK+FVS GFALTH +S+T+I+  EA +L+D+D  AV ++F+ +K     A  G+  +A AQ+
Sbjct:   38 RSGARWMSSEASSGKIKLNFSLPHETIYSGVEVAQVIIPGSEGEYGVAANHVPYISQLKAGVLQIIHEDGAGEPEKYFVSGGFALTHETSLTEISCPEAVKLDDIDSAAVSKSFDEAKAAYASAEAGSIAQAEAQI 173
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BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Match: A0A7S0Q311_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q311_9EUKA)

HSP 1 Score: 121 bits (304), Expect = 9.590e-30
Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 1 
Query:  172 MTLNFCLPHEAIYSGKTVEQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFALTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAAQV 531
            M +NFC PH A+Y  K VEQV++PGAAG +GVT GHSPI+++L+PGV+ +IH  G   EK+F+S GF++T A SVTDI+  EA  L DLDE A+R  + T+      A EG+  KA A +
Sbjct:   38 MKVNFCTPHAAVYKDKAVEQVVLPGAAGVFGVTMGHSPIISQLEPGVVTVIHVGG-TQEKYFISGGFSVTQADSVTDISVPEAFPLTDLDESAIRANYATASSTNNSAAEGSIAKATAMI 156
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig90.20852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXG0_ECTSI3.950e-6169.74ATP-synt_DE_N domain-containing protein n=1 Tax=Ec... [more]
A0A836CK87_9STRA2.280e-4355.06ATP-synt_DE_N domain-containing protein n=1 Tax=Tr... [more]
A0A4D9CR36_9STRA3.970e-3951.97ATP-synt_DE_N domain-containing protein n=2 Tax=Mo... [more]
A0A6U0LH08_9STRA3.440e-3757.55Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2PKN7_9STRA9.520e-3655.86Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6U3TGR8_9STRA3.010e-3552.52Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7R9U2Q0_9STRA1.010e-3358.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UY04_9STRA2.660e-3154.29Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1DDA2_CYCTE7.560e-3150.74Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S0Q311_9EUKA9.590e-3051.67Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig90contigS-ischiensis_contig90:108643..113386 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score209.5
Seed ortholog evalue1.4e-51
Seed eggNOG ortholog2880.D7FXG0
Preferred nameATP5D
KEGG koko:K02112,ko:K02114,ko:K02134,ko:K14573
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko03008,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map03008,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158
GOsGO:0000275,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005756,GO:0005759,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0033178,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0042221,GO:0042407,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044769,GO:0044877,GO:0045259,GO:0045261,GO:0045269,GO:0046034,GO:0046390,GO:0046483,GO:0046688,GO:0046907,GO:0046933,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0055086,GO:0061024,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.proton-transporting ATP synthase activity, rotational mechanism
EggNOG OGsCOG0355@1,KOG1758@2759
EC3.6.3.14
COG Functional cat.C
BiGG ReactioniMM904.YDL004W,iND750.YDL004W
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko01000,ko03009
Hectar predicted targeting categorymitochondrion
Ec32 ortholog descriptionATPase, F1 complex, delta/epsilon subunit
Ec32 orthologEc-07_003070.1
Exons5
Model size1115
Cds size591
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817408.7233136-UTR-S-ischiensis_contig90:108642..1090911622817408.7233136-UTR-S-ischiensis_contig90:108642..109091Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 108643..109091 -
1695741092.7273355-UTR-S-ischiensis_contig90:108642..1090911695741092.7273355-UTR-S-ischiensis_contig90:108642..109091Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 108643..109091 -
1622817408.7985218-UTR-S-ischiensis_contig90:113311..1133861622817408.7985218-UTR-S-ischiensis_contig90:113311..113386Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 113312..113386 -
1695741092.8043716-UTR-S-ischiensis_contig90:113311..1133861695741092.8043716-UTR-S-ischiensis_contig90:113311..113386Schizocladia ischiensis KU_0333UTRS-ischiensis_contig90 113312..113386 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817408.7349036-CDS-S-ischiensis_contig90:109091..1093071622817408.7349036-CDS-S-ischiensis_contig90:109091..109307Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 109092..109307 -
1695741092.7482882-CDS-S-ischiensis_contig90:109091..1093071695741092.7482882-CDS-S-ischiensis_contig90:109091..109307Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 109092..109307 -
1622817408.7463262-CDS-S-ischiensis_contig90:109897..1100141622817408.7463262-CDS-S-ischiensis_contig90:109897..110014Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 109898..110014 -
1695741092.7581432-CDS-S-ischiensis_contig90:109897..1100141695741092.7581432-CDS-S-ischiensis_contig90:109897..110014Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 109898..110014 -
1622817408.759662-CDS-S-ischiensis_contig90:110540..1106421622817408.759662-CDS-S-ischiensis_contig90:110540..110642Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 110541..110642 -
1695741092.7679121-CDS-S-ischiensis_contig90:110540..1106421695741092.7679121-CDS-S-ischiensis_contig90:110540..110642Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 110541..110642 -
1622817408.7710383-CDS-S-ischiensis_contig90:111907..1119981622817408.7710383-CDS-S-ischiensis_contig90:111907..111998Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 111908..111998 -
1695741092.7785306-CDS-S-ischiensis_contig90:111907..1119981695741092.7785306-CDS-S-ischiensis_contig90:111907..111998Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 111908..111998 -
1622817408.782321-CDS-S-ischiensis_contig90:113246..1133111622817408.782321-CDS-S-ischiensis_contig90:113246..113311Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 113247..113311 -
1695741092.7893286-CDS-S-ischiensis_contig90:113246..1133111695741092.7893286-CDS-S-ischiensis_contig90:113246..113311Schizocladia ischiensis KU_0333CDSS-ischiensis_contig90 113247..113311 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig90.20852.1prot_S-ischiensis_contig90.20852.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig90 109092..113311 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig90.20852.1

>prot_S-ischiensis_contig90.20852.1 ID=prot_S-ischiensis_contig90.20852.1|Name=mRNA_S-ischiensis_contig90.20852.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=197bp
MFGVAARRAAGACRPVLRAPLRAMSTAEEAKGMTLNFCLPHEAIYSGKTV
EQVIVPGAAGEYGVTAGHSPIVAELKPGVLQIIHEAGQAPEKFFVSAGFA
LTHASSVTDITAIEAARLEDLDEGAVREAFETSKREMEGAVEGTKEKAAA
QVNYCTVCVCVCVPVCVHMFVRALVHPAPSRSRRVVNGLGTTASTR*
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mRNA from alignment at S-ischiensis_contig90:108643..113386-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig90.20852.1 ID=mRNA_S-ischiensis_contig90.20852.1|Name=mRNA_S-ischiensis_contig90.20852.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4744bp|location=Sequence derived from alignment at S-ischiensis_contig90:108643..113386- (Schizocladia ischiensis KU_0333)
GCTTCACGGCCCCCGATACCTCACTCCACGCTGGGTGTTCCCCCAGACGA
GGACAGCTGGGGTGCGACTGGCAACATGTTCGGCGTAGCTGCCCGTCGCG
CGGCGGGGGCATGCCGGCCGGTGCTGCGCGCACCTCTCAGGTACGAAGGG
CTTTTGCGTCCGCCGGCGAGCCGGGCGTTCCCGGTCGTCAGCATGCATGC
TTTCAGGGGGCTGGGCCCTCAACGCCGAGGTCTCGCAGGCTGTGTATGAT
GCGGTGAAGTGCGTTGCGTTGGAAGCCACCGCCCGTGTGTGTTTCGTGTG
CGGCCCTAGCGCACAGATGCGGCCAGGGAAGCCGGGCCGCCCTGCCCCCC
CCAGAATACTTGTAGTGGGATGTGCGCTGAATGCTGCACGCTATATACAG
CGAACGCTGCATTTTTTGTAGATTCAGGGTGGAATCCTTGTTGCAGGGCA
AGGCGCTTCATACCCCTTCCCCCTGTGTTGTCATACGTATCACAACTCCC
CCAACCCAAGGGTTGTGCTTGCCATGATGGCCCCAGTCAACGCTTTGGGC
AGCTCATATCTTGCTGCCCGCCTGGCCGCCCGCCACGCTGACCTTGTGGT
GCTGCGTAAATGGTAAACCACACAAGTCGTTTTTACGCTTTGCGCAAATG
GTGCCGTACAGTTGTAGGGGCGAATCGTGCCCCTGCAGCTGTTGTGGGTG
GAACCCCCCGCTCGGACCCCATTTGTAGTGTGATATGAGCACGTCTATGC
CAACCAGGATGTACTTGGCGATTGGACCTCGAGGGCACTCCGGTGACCGT
CGCAACTCTTTCTTGGGGGGTTCCGAATCAGGGTGACTATGTAGCGTTTC
AAGTGACAGACTCGGAATTGGCGGGGAGCTGCGGCATTTCGACTGGGACG
GCGTGTGCCGATGCGCATCGCCGGCCGCCGCGCCCGGTCTCTCTCGCCGC
TGTTGGCCGATTCGCCGATGACGCCGATGCGCATCACAAAAATACTGTGA
AACGTTCTCTCCTTCCTTTCCTTTCCTTTCCACGGGGCAAGTTGGCCCAA
CGACCCAAGCTGCTTCCGATTGTGTTCCCATGCACTCGCCCTCTCTGCGG
CTGTCATTGCTCTCTGTGCCGCATCGATCGTTCCTGTTACTGCTGTCGTG
TGACATCACATTAGTGTCGTTTCGTGTAGTGTCCGGTCATTCGCCCTCAA
AGGGTTTAACCCTTTTACCCCTGGTAAATTGGACTTGCACTCTAAAGCCC
TGTGATTATACGGACCCAAGGGGTAAAAGGTTTAATCGGAGGACGTGGTG
CTGTAGCCTGCCGTTTTATTTATTTACATGCTTGTCGTGATGTTATAATG
GTTTATTGTCCCCTATCTCTGATTGTGTGTGTGTGCAGGGCCATGTCCAC
GGCGGAGGAGGCCAAGGGCATGACCCTCAACTTCTGCCTCCCTCACGAGG
CCATCTACTCTGGGAAGACCGTCGAACAGGTGCTCACTTGCTTACGAGCA
CTTGTAGAGTATGTCTGCGAAAGAGAGTACTACAGTAGGTTTACCATTGG
AAGACCGGTGAACAGGTGCTTGCTTGCTTCCTTGTACAGTACACTAGGTC
TGCAAGAGAAATTATTGCTGTAGGCACGAGTACACACGAAAGCGCGGGCG
GGACACCTGCCCTGCAATCGCAGTACACGCACGCTCCTACTGCTTCAGTT
AGCTGCTCGGAGGCGCCGTACTGTATGTTGACCCCTTTACCCCTGCTGAA
GTGGACTTGCACACTACAGCCCTATGGTGATAAGGACCCAGGGGCAAAGG
GTTAAGGTGCAATGAGGATACGTGAGGATGATCATTCAGTGATTATAAAC
CACCTCCTACTCATTCTGAGCACTACCGCAGGCCCCGTCCCTGTGGCCCG
GCGCCTCCACCCCTCTGCGCGTGCCCCCCGTTTCGGTCTGCCGCGGACAC
TCTCTGCACCGGTGATGGAATATCAATCCGTAGATAGGTGTCGGGCTCGA
GTGATTTCGTGGGTGGCGTTGCCAACTACTTGGATTTAGTGTGGGTCCAG
CTACCGAGTATCGACTATCGATGGATAATTAGATACTCGTAGATGAGTGC
TGTCGATAAATAGGTTGGTTTCCCTAGATGTTCCATCACTGCCCACCTGC
CCCCGTGGGCCTGCTGCCTCTGTGGAAGTACTTCGAAGTACCATATCCAT
TTGTGCAATTGTCGAGCAGTGTGCTACTGATTTAACAGGAAGAACACAGG
GCGAGGTGCAGGCCAAGTCACTAAAGACCTCAACAGTGGCCCTTCCTTGT
AGCTCGCCAGGGGAGATTTGTGTGGGGAAGGGGAAAAAAGGAGGAGGGGG
AGGGGGAGGAGGAATCGGGGGAGGGGGGAAAGAAGAGGAAGGAAAGGAAG
GGGAAAGTAGTTTGCCGTGACATTACTGTAGTCACGTTGGCACTCATGGG
ATGCGATGCGATGTGATGCGCACTCCTAGTTTGCCGTACAGCAGTACAGT
AGTTTGACATGACATTACATATATATATATATGTGCTCACGTGGTGCTTG
CCGTAGTGCCGAGACCATTGACCACGCGCCTCGGTCGAGACGGAGCAGTA
CATGACATTACACACAACACTCTGGGCACATCAGTGTCGCGCCGTCCTCA
AAGAGTCAAGCATCTGTGGAAATGCTCGAGTGCGAGTGCAGCTACTTGAC
GCACGCTCGCACGCAACTCATCCATGCCCCCCCCCCTGCGGCAGGTGATT
GTCCCGGGGGCGGCGGGGGAGTACGGCGTAACGGCCGGGCACTCGCCCAT
CGTGGCCGAGCTCAAGCCGGGGGTGCTGCAGATCATACACGAGGCGGTGA
GAAGACATACCTACTTCTGTACCGCTGTAGAGTACTGTCCTTCGTAGTAC
TGTACTGTAGTACTCACCAGTGTTTAGTACTTGTGTACAGTAGGATATTT
AGTAGCTCAAGCCGGGGGTGCTTGCAGATCATACACGAAGCGGTGAGAAG
AGGGGCATACCTCGAGTTTGAGCTACCTACTACTAGTAGTACTTACGTGT
AGTAGTACCCACCGGTGTTTAGTACTTGCAGTACTTGTGTAGGACATGTA
CTGTAGGCAGATTGTGATAAGCTTGCCGTACCTGCCCCCCCTACCGGGTG
TTTGAGGGCCAGGCCCCCGTGAAGTTCTTTGTGTCTGCGGGGTTTGCCCT
GACACACGCCTCCCTCGCTTTCTGAAACCTCTTCCCCACCCCACACACCC
TTCCTACCGGGTGTTTCCAGGGCCAGGCTCCCGAGAAGTTCTTTGCATCT
GTGGGGTTTGCCTTGACACATGCCTCCTCTGTAACTGAAACTCCTCCCCC
CCCCCCCTGCCGGTGTTTCCAGGGCCAGGCCCCTGAGAAGTTCTTTGTGT
CTGCGGGGTTCGCCCTGACACACGCCTCCTCTGTAACCGACATCACAGCC
ATCGAGGCCGCCCGTCTGGAGGACCTGGATGAGGGCGCGGTGAGGGTTCT
TGATATTCTTTGTGTGTGTGTGGCGTGTGTGTGTGTAGGTTACTGTATAT
GTATTCTTTGTGTGCTTGAGAGAGTGTGTGTGATTGTGTAGGCTGCGCAT
GTATCATGTACCTGCTCCGTATAATATATCATGTACCTGCTCCGTCTCGA
ACGAGGCGCGCGGTCAATGGTCTCGGGACTACGGCAAGCACCACGTGAGT
ACATACATATGTATCCTTGCGTGTGCGAGTACGCGTGTGCATGTGCGTGC
ACGCATGTGTGTGTGTGTGTGCATGTGTGTGCGTGTGCGTCCGCATGCGT
GGTGCTTGGCGCGTGCTCATGTTGCCTCAGGGTTGGCACTGAATCCCTAC
AGTAAGTGATGCCATTTTAGGCCCTTAGTTGGAGGTAATACAATGAATGC
TAATTTGGCCCTGATTAGCCTGTAAGTGCCAAGCCTGTGTGTGCAATGGG
TTTCCCAGGTCCGGGAGGCGTTTGAGACGACCAAGCATGAGATGGAGGGG
GCTATGTTTGTGGGTAATTAGACCAAAATTTAGGCTAATTAGGCCCTAGT
TAACCTTGTGTGTGCAATGGTTTTCCCAGGTCCGGGAGGCGTTTGAGACG
TCCAAGCGTGAGATGGAGGGGGCTGTCGAGGGCACCAAGGAGAAGGCCGC
CGCACAGGTAAACTACTGTACCGTGTGTGTGTGTGTGTGCGTGCCTGTGT
GCGTGCATATGTTTGTTCGGGCACTTGTGCATCCTGCTCCATCTCGATCG
AGGCGCGTGGTCAATGGTCTCGGGACTACGGCAAGCACAAGGTGAGTACA
TACTACGTAGTACTTGGAAGTATATATATACTTGCGCGTGCGCGTGCACG
CCTGTCCAAGTGTGTGCCACATACAATGCGTGTGTTGTTTCATGGGCACG
TGCTTGCTGTTGCTGGACAGTTCCTGTCACTGCTGTTCCTGGACAGTAAG
CCGAATCAACTGTCTCGGGACTACGGCAAACACAGCATTATTACTCATGT
GATGGCATGTTCAGCCACTCGTACAACGCTCAATTACCATCTCTCGAATT
TAATTATTCCGCCCCCTCCCCCACCGGCGCTCCCCCCCTCCTCCCGCGCC
TGCTCAGGGCTGGCACTTAACCCCTGAGTAGTGCCCTTCTAGGCCCTTAT
TTAGATATCATTAGGGGTAATGAGGCCTAAAATGAAGCCTAACTAGGCCC
TAATTAACTTCTACTTAAGTGCCGACCCTGCGCCTGCTGCCCCC
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Coding sequence (CDS) from alignment at S-ischiensis_contig90:108643..113386-

>mRNA_S-ischiensis_contig90.20852.1 ID=mRNA_S-ischiensis_contig90.20852.1|Name=mRNA_S-ischiensis_contig90.20852.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1182bp|location=Sequence derived from alignment at S-ischiensis_contig90:108643..113386- (Schizocladia ischiensis KU_0333)
ATGTTCGGCGTAGCTGCCCGTCGCGCGGCGGGGGCATGCCGGCCGGTGCT
GCGCGCACCTCTCAGATGTTCGGCGTAGCTGCCCGTCGCGCGGCGGGGGC
ATGCCGGCCGGTGCTGCGCGCACCTCTCAGGGCCATGTCCACGGCGGAGG
AGGCCAAGGGCATGACCCTCAACTTCTGCCTCCCTCACGAGGCCATCTAC
TCTGGGAAGACCGTCGAACAGGGCCATGTCCACGGCGGAGGAGGCCAAGG
GCATGACCCTCAACTTCTGCCTCCCTCACGAGGCCATCTACTCTGGGAAG
ACCGTCGAACAGGTGATTGTCCCGGGGGCGGCGGGGGAGTACGGCGTAAC
GGCCGGGCACTCGCCCATCGTGGCCGAGCTCAAGCCGGGGGTGCTGCAGA
TCATACACGAGGCGGTGATTGTCCCGGGGGCGGCGGGGGAGTACGGCGTA
ACGGCCGGGCACTCGCCCATCGTGGCCGAGCTCAAGCCGGGGGTGCTGCA
GATCATACACGAGGCGGGCCAGGCCCCTGAGAAGTTCTTTGTGTCTGCGG
GGTTCGCCCTGACACACGCCTCCTCTGTAACCGACATCACAGCCATCGAG
GCCGCCCGTCTGGAGGACCTGGATGAGGGCGCGGGCCAGGCCCCTGAGAA
GTTCTTTGTGTCTGCGGGGTTCGCCCTGACACACGCCTCCTCTGTAACCG
ACATCACAGCCATCGAGGCCGCCCGTCTGGAGGACCTGGATGAGGGCGCG
GTCCGGGAGGCGTTTGAGACGTCCAAGCGTGAGATGGAGGGGGCTGTCGA
GGGCACCAAGGAGAAGGCCGCCGCACAGGTAAACTACTGTACCGTGTGTG
TGTGTGTGTGCGTGCCTGTGTGCGTGCATATGTTTGTTCGGGCACTTGTG
CATCCTGCTCCATCTCGATCGAGGCGCGTGGTCAATGGTCTCGGGACTAC
GGCAAGCACAAGGTGAGTCCGGGAGGCGTTTGAGACGTCCAAGCGTGAGA
TGGAGGGGGCTGTCGAGGGCACCAAGGAGAAGGCCGCCGCACAGGTAAAC
TACTGTACCGTGTGTGTGTGTGTGTGCGTGCCTGTGTGCGTGCATATGTT
TGTTCGGGCACTTGTGCATCCTGCTCCATCTCGATCGAGGCGCGTGGTCA
ATGGTCTCGGGACTACGGCAAGCACAAGGTGA
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