mRNA_S-ischiensis_contig9.20793.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: D7FIE9_ECTSI (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE9_ECTSI) HSP 1 Score: 199 bits (505), Expect = 2.140e-58 Identity = 96/152 (63.16%), Postives = 112/152 (73.68%), Query Frame = 3
Query: 156 AAPVSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHGMRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFKPGDGGG 611
A VSASG+ +TR +LA+++ L I Q+YV+ S GTEPPF GR +NG ++S KR G + CA+CDLPAYSS KFNSGTGWPSFY+ IDP HVWE TD S GM RKEV C RC +HQGHVFNDGP PTG RYC+NAASL FK G G
Sbjct: 16 AGAVSASGYDVTRRKKGTA-QLARERALSIKQRYVV-SGGTEPPFSGRFSNGVRYSTKRRGTFNCAVCDLPAYSSSSKFNSGTGWPSFYETIDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFKAAHGEG 165
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: A0A6H5JXE9_9PHAE (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXE9_9PHAE) HSP 1 Score: 198 bits (503), Expect = 4.250e-58 Identity = 92/146 (63.01%), Postives = 110/146 (75.34%), Query Frame = 3
Query: 156 AAPVSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHGMRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFK 593
A VSASG+ +TR +LA+++ L + Q+YV+ S GTEPPF GR +NG ++S KR G + CA+CDLPAYSS KFNSGTGWPSFY+ +DP HVWE TD S GM RKEV C RC +HQGHVFNDGP PTG RYC+NAASL FK
Sbjct: 15 AGTVSASGYDVTRRK-KSTAQLARERSLSVKQRYVV-SGGTEPPFSGRFSNGVRYSTKRRGTFDCAVCDLPAYSSSSKFNSGTGWPSFYETVDPDHVWETTDLSAGMVRKEVKCARCHAHQGHVFNDGPRPTGKRYCVNAASLTFK 158
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: Q0VPB9_ALCBS (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Alcanivorax borkumensis (strain ATCC 700651 / DSM 11573 / NCIMB 13689 / SK2) TaxID=393595 RepID=Q0VPB9_ALCBS) HSP 1 Score: 164 bits (415), Expect = 5.930e-46 Identity = 79/143 (55.24%), Postives = 100/143 (69.93%), Query Frame = 3
Query: 165 VSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHGMRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFK 593
+SASGF LT L+ EE++ A+ + L +++++ + GTEPPF G + NK AG Y C LCDLP ++S KF SGTGWPSFY+P DP H+ E +D SHGM R E+ C RC SHQGHVF DGP PTG RYC+N+ASL FK
Sbjct: 5 LSASGFDLTPLS--EEEKQARAQTLTEEERHILLNQGTEPPFCGGLLD-----NKDAGTYHCKLCDLPLFASDAKFESGTGWPSFYQPYDPEHIRELSDRSHGMLRVEIRCARCDSHQGHVFPDGPPPTGQRYCLNSASLTFK 140
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: A0A250XIR0_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XIR0_9CHLO) HSP 1 Score: 164 bits (415), Expect = 1.040e-44 Identity = 92/190 (48.42%), Postives = 114/190 (60.00%), Query Frame = 3
Query: 33 PHQ-PGYTQPCTRLHRDGDFSVWTTTLSQLQTSQVEGMASNAAAPVSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHG-MRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFKP 596
PH+ P T + R+ + TT S ++ + +S SGF +T LT +E E AK L + KYV+ GTE PF G+T +G H +K G Y+CAL LP +SSK KF+SGTGWPSFY PIDP HV E TD S M R EV+ R G+H GHVFNDGP PTG RYCINAA+L+F P
Sbjct: 33 PHRKPIVTTAVLQFFREKLADIMGTTSSSSSKGWSPAVSKDIPRNMSRSGFDVTPLTKEERDEAAKG--LPSMSKYVVLEHGTERPFTGKTIDGISHDSKAKGTYVCALGGLPLFSSKAKFDSGTGWPSFYAPIDPEHVIEVTDMSIPYMPRVEVLDRRSGAHLGHVFNDGPAPTGKRYCINAAALKFIP 220
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: A0A1C2IIN1_ACITH (Peptide methionine sulfoxide reductase MsrB n=9 Tax=Acidithiobacillus TaxID=119977 RepID=A0A1C2IIN1_ACITH) HSP 1 Score: 159 bits (403), Expect = 3.660e-44 Identity = 76/145 (52.41%), Postives = 97/145 (66.90%), Query Frame = 3
Query: 162 PVSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHGMRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFKP 596
P S++G+ LT + + E+AK L ++V+F GTEPPF G G H K AG Y+CALC LP + S +KF SGTGWPSF++P P H+ E TD S+G R E+ C RC SH GHVF DGP PTGLRYC+N+A+LRF+P
Sbjct: 2 PTSSAGYDLTPIDANTRAEMAKD--LPAEVRHVLFEHGTEPPFCG----GLLHE-KEAGNYLCALCSLPLFRSANKFESGTGWPSFWEPFAPDHIRELTDTSYGRVRTEIRCARCDSHLGHVFPDGPEPTGLRYCLNSAALRFEP 139
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: B4X305_9GAMM (Peptide methionine sulfoxide reductase MsrB n=5 Tax=unclassified Alcanivorax TaxID=2638842 RepID=B4X305_9GAMM) HSP 1 Score: 159 bits (401), Expect = 7.460e-44 Identity = 77/146 (52.74%), Postives = 98/146 (67.12%), Query Frame = 3
Query: 165 VSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHGMRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFKPGD 602
+SASGF LT L+ EE++ A+ + L ++ ++ + GTEPPF G + NK G Y C LCDLP ++S KF SGTGWPSFY+P DP H+ E D+SHGM R E+ C RC HQGHVF DGP PTG RYC+N+AS+ FK D
Sbjct: 5 LSASGFDLTPLS--EEEKQARARSLSEEERRILLNQGTEPPFCGGLLD-----NKDDGTYHCKLCDLPLFTSSAKFESGTGWPSFYEPFDPQHIRELHDSSHGMVRVEIRCARCDGHQGHVFPDGPPPTGQRYCLNSASMVFKAED 143
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: A0A2P6VLH8_9CHLO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VLH8_9CHLO) HSP 1 Score: 160 bits (404), Expect = 7.480e-44 Identity = 83/155 (53.55%), Postives = 103/155 (66.45%), Query Frame = 3
Query: 144 ASNAAAPVSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHG-MRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFKPGDG 605
A++A S+SG+ +T LT ++ + A L Q+YV AGTE F G+T +G H NKR G Y+ A+ LP +SS HKF+SGTGWPSFYKPIDP HV E +D S M + EVV R G+H GHVFNDGP PTG RYC+NAA+LRF P G
Sbjct: 14 AADAPRKFSSSGYDVTPLTTEQRIQAAAP--LTDFQRYVALEAGTERAFTGKTVDGASHDNKRKGVYVSAVGGLPLFSSDHKFDSGTGWPSFYKPIDPEHVIEISDTSIPFMPQVEVVDARSGAHLGHVFNDGPRPTGKRYCMNAAALRFIPSGG 166
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: A0A2K3DYQ7_CHLRE (Peptide-methionine (R)-S-oxide reductase n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DYQ7_CHLRE) HSP 1 Score: 162 bits (409), Expect = 9.710e-44 Identity = 90/187 (48.13%), Postives = 110/187 (58.82%), Query Frame = 3
Query: 63 TRLHRDGDFSVW-----TTTLSQLQTSQVEGMA---SNAAAPVSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHG-MRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFKP 596
TRL+ D W + QT G A + A VS +G+ +T LT +E + A+ L QKYV GTE F G+T NGY H NK+ G Y+CAL LP +SS KFNSGTGWPSF+ PIDP H+ E D S M R EV+ R G+H GHVF+DGP PTG RYCINAA+L+F P
Sbjct: 37 TRLYAAADLLGWLFKGKVPEMGGKQTKSSRGWAPRDESTPAKVSRAGYDVTPLTAEERQRAAEG--LTDFQKYVTLEHGTERAFTGKTVNGYTHDNKQRGTYVCALGGLPLFSSDTKFNSGTGWPSFFAPIDPAHIVEVVDMSIPYMPRVEVLDARSGAHLGHVFDDGPAPTGKRYCINAAALKFIP 221
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: A0A2P6U3D8_CHLSO (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U3D8_CHLSO) HSP 1 Score: 159 bits (402), Expect = 2.000e-43 Identity = 79/144 (54.86%), Postives = 98/144 (68.06%), Query Frame = 3
Query: 168 SASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHG-MRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFKP 596
SASG+ +T LT +E +A K L Q+ V AGTE F G+T +G H NKR G Y+ A+ LP +SS+HK++SGTGWPSF+KP+DP HV E D S M R EV+C R G+H GHVF DGP PTG RYC+NAA+LRF P
Sbjct: 30 SASGYDITPLTTEER--IAAAKPLTDFQRNVTLQAGTERAFTGKTVDGSPHDNKRKGTYVSAVGGLPLFSSEHKYDSGTGWPSFFKPLDPEHVIEVADTSIPFMPRVEVLCARSGAHLGHVFTDGPRPTGRRYCMNAAALRFIP 171
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Match: A0A1I1ES09_9GAMM (Peptide-methionine (R)-S-oxide reductase n=1 Tax=Marinospirillum celere TaxID=1122252 RepID=A0A1I1ES09_9GAMM) HSP 1 Score: 156 bits (395), Expect = 5.070e-43 Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 3
Query: 174 SGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFKGRTANGYKHSNKRAGQYMCALCDLPAYSSKHKFNSGTGWPSFYKPIDPGHVWEKTDASHGMRRKEVVCTRCGSHQGHVFNDGPNPTGLRYCINAASLRFK 593
S + LT LT D++ ELA+K L + ++ + GTEPPF G + NK AGQY CALCDLP +SS+HKF+SGTGWPSFY+ + P H+ D S GM R E+ CTRC H GHVF+DGP PTG RYC+N+ ++ FK
Sbjct: 5 SEYDLTPLTDDQKLELAEK--LSPEARRILLNQGTEPPFCGGLLD-----NKEAGQYHCALCDLPLFSSEHKFDSGTGWPSFYQSVHPDHIRYLEDRSAGMLRTEIRCTRCDGHLGHVFDDGPGPTGQRYCLNSQAMEFK 137 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20793.1 >prot_S-ischiensis_contig9.20793.1 ID=prot_S-ischiensis_contig9.20793.1|Name=mRNA_S-ischiensis_contig9.20793.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=197bp MASNAAAPVSASGFTLTRLTLDEEKELAKKKRLGILQKYVMFSAGTEPPFback to top mRNA from alignment at S-ischiensis_contig9:3288367..3289957- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20793.1 ID=mRNA_S-ischiensis_contig9.20793.1|Name=mRNA_S-ischiensis_contig9.20793.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1591bp|location=Sequence derived from alignment at S-ischiensis_contig9:3288367..3289957- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:3288367..3289957- >mRNA_S-ischiensis_contig9.20793.1 ID=mRNA_S-ischiensis_contig9.20793.1|Name=mRNA_S-ischiensis_contig9.20793.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1182bp|location=Sequence derived from alignment at S-ischiensis_contig9:3288367..3289957- (Schizocladia ischiensis KU_0333)back to top |