mRNA_S-ischiensis_contig9.20767.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A834G0Y7_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834G0Y7_RHOSS) HSP 1 Score: 120 bits (301), Expect = 1.910e-26 Identity = 78/223 (34.98%), Postives = 120/223 (53.81%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPISLVDYTSEVNM-SGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDNIGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVA 683
L +VE G+ YEV++TTYGGLYRYR+ D+++V+GF+ P+V F+ R+ LLS+ +++T E L ++ A R + E +++DYTS + S +P HY IY EL S S+E LGR AM+ LG + SC A +IGPL + + GTF++ IS ++Q+K+PRCVN +R ++ + VV+
Sbjct: 384 LADVEVGQEYEVVVTTYGGLYRYRIGDILRVTGFHNSAPQVLFVSRKNVLLSIDADKTDEADLQKSVETAGRLLRDESNA--------TVLDYTSYADSKSTIPGHYVIYWELV---------------APDSACWPSDELLGRCCLAMEESLGDI--YRSCRAADRSIGPLEIRVVRSGTFEEIMDYAISRGAS---ISQYKVPRCVNVAPIRNLLESRVVS 578
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A6A6KY97_HEVBR (Uncharacterized protein n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6KY97_HEVBR) HSP 1 Score: 114 bits (286), Expect = 2.290e-26 Identity = 78/223 (34.98%), Postives = 119/223 (53.36%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDN-IGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVA 683
L EVE GK YE+++TTY GLYRYR+ D+++V+GF+ P+ F+ R+ LLS+ S++T E L A+ A + LRE S+V+YTS ++ +P HY IY EL + S SE+ L + A++ L N VY R + N IGPL + ++ GTF++ IS +NQ+K+PRCVN + ++ + VV+
Sbjct: 30 LAEVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDETELQKAVENASQL----LREFNT-----SVVEYTSYADVKTIPGHYVIYWELL---------------IKDSTNSPSEKVLSECSLAIEESL---NSVYRQGRVRYNSIGPLEIRLVKNGTFEELMDYAISRGAS---INQYKVPRCVNFTPITELLDSRVVS 222
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: F6H697_VITVI (Uncharacterized protein n=25 Tax=rosids TaxID=71275 RepID=F6H697_VITVI) HSP 1 Score: 119 bits (299), Expect = 3.560e-26 Identity = 82/226 (36.28%), Postives = 118/226 (52.21%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAA---LRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDN-IGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVA 683
L VE GK YE+++TTY GLYRYR+ D+++V+GF+ P+ F+ R+ LLS+ S++T E L A+ A LR VN S+V+YTS + +P HY IY EL V S S+E LG+ AM+ L N VY R DN IGPL + ++ GTF++ IS +NQ+K+PRCVN + ++ + VV+
Sbjct: 390 LAHVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVDNASKLLREVN------------TSVVEYTSFADTKTIPGHYVIYWELL---------------VKDSANSPSDELLGQCCLAMEESL---NSVYRQGRVADNSIGPLEIRVVKSGTFEELMDYAISRGAS---INQYKVPRCVNFTPIMELLDSRVVS 582
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A2K1Z5B2_POPTR (Uncharacterized protein n=16 Tax=Saliceae TaxID=238069 RepID=A0A2K1Z5B2_POPTR) HSP 1 Score: 119 bits (297), Expect = 6.520e-26 Identity = 80/224 (35.71%), Postives = 118/224 (52.68%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDN-IGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVAK 686
L +VE GK YE+++TTY GLYRYR+ D+++V+GF+ P+ F+ R+ LLS+ S++T E L A+ A + LRE S+V+YTS + +P HY IY EL V S +E L + AM+ L N VY R DN IGPL + ++ GTF++ IS +NQ+K+PRCVN + ++ + VV+K
Sbjct: 388 LADVELGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQTAVENASQL----LREFNT-----SVVEYTSHADTKTIPGHYVIYWELL---------------VKDSANSPGDEVLNQCCLAMEESL---NSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGAS---INQYKVPRCVNFTPIMELLDSRVVSK 581
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A068TPG8_COFCA (Uncharacterized protein n=1 Tax=Coffea canephora TaxID=49390 RepID=A0A068TPG8_COFCA) HSP 1 Score: 113 bits (282), Expect = 7.140e-26 Identity = 80/223 (35.87%), Postives = 119/223 (53.36%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDN-IGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVA 683
L +VE GK YE+++TTY GLYRYR+ D+++V+GF+ P+ +F+ R+ LLS+ S++T E L A+ A + LRE S+V+YTS + +P HY IY EL D A S S+E L AM+ L N VY R DN IGPL + ++ GTF++ IS +NQ+K+PRCV+ + ++ + VV+
Sbjct: 27 LADVEIGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFRFVRRKNVLLSIDSDKTDEAELQKAVENASQL----LREYNT-----SVVEYTSFADAKTIPGHYVIYWELL------------VKDAAHS---PSDEALNGCCLAMEESL---NSVYRQGRVADNSIGPLEIRVVKSGTFEELMDYAISRGAS---INQYKVPRCVSFTPIVELLDSRVVS 219
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A0U9HLX3_KLENI (Auxin-responsive GH3 family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HLX3_KLENI) HSP 1 Score: 116 bits (290), Expect = 8.870e-26 Identity = 83/231 (35.93%), Postives = 127/231 (54.98%), Query Frame = 3
Query: 12 KMLHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGAL-LSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPIS--LVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRL-NYVYSCDRAQDNIGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVAKAA 692
K+LHE+EE ++YE++LT GLYRY ++DVVKV+GF P+VQ+ YRRG L ++ E+ +EK L+ A+ GE+ E+ LP S ++DYT ++ P YS++ E V G+ V EE LG A A DA L + +YV+ RAQ IG + +++G FD++R + E GT D Q+K+PRC+ +A+ R ++ +A
Sbjct: 177 KLLHELEEARSYELVLTNVSGLYRYGLEDVVKVTGFWHGLPQVQYEYRRGMLTITAKPEKVTEKDLAVAI--------GEM---EKWLPAESGRVLDYTVAIDTEADPERYSVFVE-----------------VNGNEETVMEEILGACADAFDASLQKNPDYVHYRLRAQ--IGTAEICLVKRGAFDEFRAWKV--EKGT-DTAQYKVPRCLKTPEQQAVFRTRLLRSSA 374
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A438EPK4_VITVI (Putative indole-3-acetic acid-amido synthetase GH3.1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EPK4_VITVI) HSP 1 Score: 118 bits (296), Expect = 8.930e-26 Identity = 81/226 (35.84%), Postives = 118/226 (52.21%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAA---LRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDN-IGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVA 683
L VE GK YE+++TTY GLYRYR+ D+++V+GF+ P+ F+ R+ LLS+ S++T E L A+ A LR VN S+V+YTS + +P HY IY EL V S S++ LG+ AM+ L N VY R DN IGPL + ++ GTF++ IS +NQ+K+PRCVN + ++ + VV+
Sbjct: 390 LAHVEVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQKAVDNASKLLREVN------------TSVVEYTSFADTKTIPGHYVIYWELL---------------VKDSANSPSDQLLGQCCLAMEESL---NSVYRQGRVADNSIGPLEIRVVKSGTFEELMDYAISRGAS---INQYKVPRCVNFTPIMELLDSRVVS 582
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A2P6PLP5_ROSCH (Putative GH3 family protein n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6PLP5_ROSCH) HSP 1 Score: 118 bits (295), Expect = 1.200e-25 Identity = 78/224 (34.82%), Postives = 118/224 (52.68%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVY-SCDRAQDNIGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVAK 686
L +V GK YE+++TTY GLYRYR+ D+++V+GF+ P+ F+ R+ LLS+ S++T E L A+ A + V +L S+V+YTS + +P HY IY EL V S S E L + AM+ L N VY C A ++IGPL + ++ GTF++ IS +NQ+K+PRCVN + ++ + VV+K
Sbjct: 387 LVDVVVGKEYELVITTYAGLYRYRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAELQLAVDNATKLVLEKLNA--------SVVEYTSFADTKTIPGHYVIYWELL---------------VKDSAESPSSESLSQCCLAMEESL---NSVYRQCRVADNSIGPLEIRVVKSGTFEELMDYAISRGAS---INQYKVPRCVNFTPIMELLDSRVVSK 581
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A067L7Q1_JATCU (Uncharacterized protein n=1 Tax=Jatropha curcas TaxID=180498 RepID=A0A067L7Q1_JATCU) HSP 1 Score: 118 bits (295), Expect = 1.220e-25 Identity = 80/223 (35.87%), Postives = 120/223 (53.81%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDN-IGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVA 683
L +VE GK YE ++TTY GLYRYR+ D+++V+GF+ P+ QF+ R+ LLS+ S++T E L +A+ A + L+E + S+V+YTS + +P HY IY EL V S S+E L + AM+ L N VY R DN IGPL + ++ GTF++ IS +NQ+K+PRCVN + ++ + VV+
Sbjct: 390 LVDVEVGKEYEFVITTYSGLYRYRVGDILRVTGFHNSAPQFQFVRRKNVLLSIDSDKTDEAELQNAVENASQL----LKEYKT-----SVVEYTSFADTKTIPGHYVIYWELL---------------VKDSANSPSKEVLNQCCLAMEESL---NSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGAS---INQYKVPRCVNFTPIMELLDSRVVS 582
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Match: A0A4S4D4M4_CAMSI (Uncharacterized protein n=3 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4D4M4_CAMSI) HSP 1 Score: 118 bits (295), Expect = 1.340e-25 Identity = 80/223 (35.87%), Postives = 119/223 (53.36%), Query Frame = 3
Query: 18 LHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGALLSVHSERTSEKMLSDALVAALRAVNGELREGEERLPPISLVDYTSEVNMSGLPAHYSIYCELARGGGEGXXXXXXXXDVAGSGPLVSEEDLGRLATAMDAELGRLNYVYSCDRAQDN-IGPLHVVRLEQGTFDKYRLQTISPETGTTDVNQFKMPRCVNNDRMRAIIRAGVVA 683
L VE GK YE+++TTY GLYRYR+ D++ V+GF+ P+ F+ R+ LLS+ S++T E L A+ A + V E S+V+YTS + +P HY IY EL D SG +S+E + R AM+ L N VY R DN IGPL + ++ GTF++ L S G + +NQ+K+PRCV+ + ++ + VV+
Sbjct: 416 LANVEVGKEYELVITTYAGLYRYRVGDILLVTGFHNSAPQFHFVRRKNVLLSIDSDKTDESELQRAVENASQLVLSEFNA--------SVVEYTSYADTRTIPGHYVIYWELL------------LKDY--SGESLSDEVMSRCCLAMEESL---NSVYRQGRVADNSIGPLEIRVVKSGTFEE--LMDYSISRGAS-INQYKVPRCVSFTPIMELLDSRVVS 610 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20767.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20767.1 >prot_S-ischiensis_contig9.20767.1 ID=prot_S-ischiensis_contig9.20767.1|Name=mRNA_S-ischiensis_contig9.20767.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=249bp MLHEVEEGKAYEVLLTTYGGLYRYRMKDVVKVSGFNGHTPRVQFLYRRGAback to top mRNA from alignment at S-ischiensis_contig9:3053534..3057321+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20767.1 ID=mRNA_S-ischiensis_contig9.20767.1|Name=mRNA_S-ischiensis_contig9.20767.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3788bp|location=Sequence derived from alignment at S-ischiensis_contig9:3053534..3057321+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:3053534..3057321+ >mRNA_S-ischiensis_contig9.20767.1 ID=mRNA_S-ischiensis_contig9.20767.1|Name=mRNA_S-ischiensis_contig9.20767.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1494bp|location=Sequence derived from alignment at S-ischiensis_contig9:3053534..3057321+ (Schizocladia ischiensis KU_0333)back to top |