mRNA_S-ischiensis_contig9.20763.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: D8LSM4_ECTSI (Alkyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM4_ECTSI) HSP 1 Score: 156 bits (394), Expect = 4.150e-43 Identity = 76/112 (67.86%), Postives = 86/112 (76.79%), Query Frame = 1
Query: 172 VPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVE 507
VPRHVAFV+DGNGRWAA R LPR GH EGA+RA E VEACR+LGVEFVT+Y FSTENW RP EV +M + +ETLLE R SL NGIRL AIG+LDRLP L SL ++
Sbjct: 71 VPRHVAFVMDGNGRWAANRNLPRRIGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPTGEVSFIMDLMEETLLEQRDSLRRNGIRLTAIGELDRLPARLRSLLLEIQ 182
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A6H5KLI8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLI8_9PHAE) HSP 1 Score: 155 bits (393), Expect = 2.790e-41 Identity = 76/112 (67.86%), Postives = 85/112 (75.89%), Query Frame = 1
Query: 172 VPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVE 507
VPRHVAFV+DGNGRWA R LPR GH EGA+RA E VEACR+LGVEFVT+Y FSTENW RPA EV LM + +ETLLE R SL NGIRL IG+LDRLP L SL ++
Sbjct: 318 VPRHVAFVMDGNGRWAVSRNLPRRTGHAEGARRAGEAVEACRRLGVEFVTLYAFSTENWRRPAGEVSFLMDLMEETLLEQRDSLRRNGIRLTVIGELDRLPARLRSLLLEIQ 429
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A835ZI19_9STRA (Alkyl transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI19_9STRA) HSP 1 Score: 139 bits (350), Expect = 1.760e-37 Identity = 67/117 (57.26%), Postives = 85/117 (72.65%), Query Frame = 1
Query: 163 LPSVPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVEAQ 513
L VP+HVAFVLDGNGRWA R LPR AGH+EGAKRA EV+E CR+LGV++VT++ FSTENW RPA EV LM + + + +R ++ +NGIRLV IGQ +RL L L V+ +
Sbjct: 31 LRRVPKHVAFVLDGNGRWATRRGLPRTAGHIEGAKRALEVIELCRELGVQYVTLFTFSTENWKRPAAEVASLMALLEHNIEANRRAMRQNGIRLVLIGQKERLSTGLQCLVEEVQRE 147
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A7X5BNF9_9AQUI (Isoprenyl transferase n=4 Tax=Thermocrinis TaxID=75905 RepID=A0A7X5BNF9_9AQUI) HSP 1 Score: 134 bits (337), Expect = 4.010e-36 Identity = 64/114 (56.14%), Postives = 82/114 (71.93%), Query Frame = 1
Query: 172 VPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVEAQ 513
+P+H+A ++DGNGRWA ER LPRIAGH EG KRA EVV AC++LGVEF+T+Y FSTENW RP EE++ L ++F+ L E L E GIRL IG+ DRLP L++ E +
Sbjct: 4 IPKHLAIIMDGNGRWARERGLPRIAGHYEGVKRAEEVVYACQELGVEFLTLYTFSTENWKRPKEEIKALFELFENYLNEKVPELKERGIRLKFIGRRDRLPKSTLTVMDYAEEE 117
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A1M6R033_9AQUI (Isoprenyl transferase n=1 Tax=Thermocrinis minervae TaxID=381751 RepID=A0A1M6R033_9AQUI) HSP 1 Score: 130 bits (327), Expect = 1.300e-34 Identity = 59/112 (52.68%), Postives = 81/112 (72.32%), Query Frame = 1
Query: 172 VPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVE 507
+PRH+A ++DGNGRWA R L RI GH EG KRA E+V++C KLG+E++T++ FSTENW RP EEV L +F+ L++ + L E G+R+ IG+ DRLP +LL + R VE
Sbjct: 3 IPRHLAVIMDGNGRWARARGLERIQGHYEGVKRAEELVDSCLKLGIEYLTLFTFSTENWKRPKEEVRALFSMFEAYLMKKKDELREKGVRVKFIGRRDRLPTNLLEVIRQVE 114
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A496RQH3_9BACT (Isoprenyl transferase n=1 Tax=Candidatus Omnitrophica bacterium TaxID=2035772 RepID=A0A496RQH3_9BACT) HSP 1 Score: 130 bits (326), Expect = 2.570e-34 Identity = 54/117 (46.15%), Postives = 86/117 (73.50%), Query Frame = 1
Query: 163 LPSVPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVEAQ 513
L ++P+H+A ++DGNGRWA +R+LPRIAGH +GA+RA ++++AC LGV+++T+Y FSTENW RP E++ LM +F L + +SL +N +R + IG++D+ P ++ L R + Q
Sbjct: 4 LNTIPQHIAIIMDGNGRWAKKRKLPRIAGHSKGAQRAKDIIKACSNLGVKYLTLYAFSTENWKRPKIEIKFLMSLFLRYLKKEAVSLDKNNVRFLTIGRVDKFPENVQQLIREITEQ 120
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A3M2H5T7_9BACT (Isoprenyl transferase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2H5T7_9BACT) HSP 1 Score: 129 bits (323), Expect = 4.920e-34 Identity = 62/112 (55.36%), Postives = 78/112 (69.64%), Query Frame = 1
Query: 172 VPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVE 507
+PRH+A ++DGNGRWA ER LPRIAGH EG KRA E+VEAC +LG+ F+T++VFSTENW RP EEV L + + L E+ L + GIRL IG+ +RLP LL E
Sbjct: 3 IPRHLAIIMDGNGRWAKERGLPRIAGHYEGVKRAEELVEACIELGIRFLTLFVFSTENWKRPKEEVWSLFSLLEGYLRENSKKLLKKGIRLSFIGRRERLPESLLKEMERAE 114
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: UPI0004962530 (polyprenyl diphosphate synthase n=1 Tax=Thermocrinis sp. GBS TaxID=1313265 RepID=UPI0004962530) HSP 1 Score: 129 bits (323), Expect = 5.050e-34 Identity = 59/114 (51.75%), Postives = 80/114 (70.18%), Query Frame = 1
Query: 172 VPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVEAQ 513
+P+H+A ++DGNGRWA E+ LPRIAGH EG KRA E+V AC+ LG++F+T+Y FSTENW RPAEEV+ L ++F+ L + L E I+L IG+ DR+P L + E Q
Sbjct: 4 IPKHLAIIMDGNGRWAQEKGLPRIAGHYEGTKRAEEIVYACQDLGIKFLTLYTFSTENWKRPAEEVKALFELFENYLGKKITELKERNIKLRFIGRKDRIPKTTLKIMEEAEEQ 117
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A7C7PXU1_9AQUI (Isoprenyl transferase n=1 Tax=Aquificaceae bacterium TaxID=2053503 RepID=A0A7C7PXU1_9AQUI) HSP 1 Score: 128 bits (321), Expect = 1.120e-33 Identity = 57/112 (50.89%), Postives = 80/112 (71.43%), Query Frame = 1
Query: 172 VPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVE 507
+PRH+A ++DGNGRWA R +PR+ GH +GA+ A E+V AC LGVE++T++ FSTENW+RP EEVE+L+ + K+ L + L E G+RL IG+ DRLP +L L +E
Sbjct: 6 IPRHIAVIMDGNGRWARRRGMPRVMGHYKGAQVAEEIVRACADLGVEYLTLFAFSTENWNRPREEVELLLNLMKDYLSRKKSELLELGVRLRFIGRRDRLPRELRELMEELE 117
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Match: A0A3L6LXF9_9RHOO (Isoprenyl transferase n=1 Tax=Rhodocyclales bacterium GT-UBC TaxID=2316108 RepID=A0A3L6LXF9_9RHOO) HSP 1 Score: 128 bits (322), Expect = 1.340e-33 Identity = 59/115 (51.30%), Postives = 82/115 (71.30%), Query Frame = 1
Query: 169 SVPRHVAFVLDGNGRWAAERRLPRIAGHMEGAKRATEVVEACRKLGVEFVTMYVFSTENWHRPAEEVEMLMKVFKETLLEHRLSLWENGIRLVAIGQLDRLPPDLLSLFRSVEAQ 513
+VPRHVA ++DGNGRWA +R LPR+AGH++G + E+V AC + GV+++T++ FS+ENW RPAEEV +LM++F + L + L NG+RL IG L R P L L RS EA+
Sbjct: 16 AVPRHVAVIMDGNGRWAKKRFLPRVAGHVKGVELVREMVRACLERGVDYLTLFAFSSENWRRPAEEVSLLMQLFVKALEQEVEKLDRNGVRLRVIGDLSRFDPSLQQLIRSAEAK 130 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20763.1 >prot_S-ischiensis_contig9.20763.1 ID=prot_S-ischiensis_contig9.20763.1|Name=mRNA_S-ischiensis_contig9.20763.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=167bp MAVDLGGGETAWVAKDASSTGTSEGVPVASSRSRNPGVGGVMSTPLPSVPback to top mRNA from alignment at S-ischiensis_contig9:3038691..3043268+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20763.1 ID=mRNA_S-ischiensis_contig9.20763.1|Name=mRNA_S-ischiensis_contig9.20763.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4578bp|location=Sequence derived from alignment at S-ischiensis_contig9:3038691..3043268+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:3038691..3043268+ >mRNA_S-ischiensis_contig9.20763.1 ID=mRNA_S-ischiensis_contig9.20763.1|Name=mRNA_S-ischiensis_contig9.20763.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1002bp|location=Sequence derived from alignment at S-ischiensis_contig9:3038691..3043268+ (Schizocladia ischiensis KU_0333)back to top |