mRNA_S-ischiensis_contig9.20757.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A6H5JYW2_9PHAE (SH2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYW2_9PHAE) HSP 1 Score: 226 bits (576), Expect = 3.860e-63 Identity = 137/273 (50.18%), Postives = 165/273 (60.44%), Query Frame = 1
Query: 139 EIVIKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRPVMLHLWDVAGAQAHASPNHHGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLGKDVCKLLVGHKADLPAFVVGREAMDAY-AEACGFQDWCLTVGSPGYGDYSVGARRG----------RTRGQEGSEQERGMLRKQLAVAEAVRALVGRALRVGWGDASASQPSPNSSSSPNPSRDWSAAGLAVLGQGVGPFPQAPELAPEPDALRTVRDLGPGNR 924
E+V+K+LLVGGP+ GKTS+VRRL ++ F EDYV T GFD V+PYGTYQGRPV LHLWDVAG+Q A P HHGL+ A V++V+DV+S SL AVD W ALS + CKLLVGHKADLPA+VV EA+ Y A A GF+ WCLTVGS YGDY V ARRG R +GQ S + KQL+V+EAVR L+G R G AS+P AG+ LG G P + DAL T+ LG G +
Sbjct: 9 ELVLKVLLVGGPKAGKTSLVRRLCDKAFREDYVQTLGFDVTVVPYGTYQGRPVKLHLWDVAGSQLTAQPCHHGLIGQGAEGVLYVMDVTSRESLQAVDDWDQALSKFYPPWTCKLLVGHKADLPAYVVNDEALSLYVAGASGFKGWCLTVGSSEYGDYDVAARRGGGSGATAHGARHKGQSLSGE------KQLSVSEAVRTLLGHVFRSGGAARGASRP----------------AGVLGLGASAGRATPLPSDHLQ-DALETMELLGLGGK 258
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A835YQQ8_9STRA (SH2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ8_9STRA) HSP 1 Score: 148 bits (374), Expect = 8.420e-37 Identity = 89/218 (40.83%), Postives = 115/218 (52.75%), Query Frame = 1
Query: 199 RRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRPVMLHLWDVAGAQAHASPNHHGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLGKDVCKLLVGHK---------------------------------------ADLPAFVVGREAMDAYAEACGFQ-DWCLTVGSPGYGDYSVGARRGRTRGQEGSEQERGMLRKQLAVAEAVRALVGRALR 732
RRL ++PF E Y PT FD +P+G + G PV++ LWDVAGAQ A P+HH L+ + A+A + V+D +SA SL A DAW+ AL+ +L K+LV HK DLP VV + AMDAYA A GF+ WC TVG+P +GDYSV GSE+ R + KQL V EA+R +V ALR
Sbjct: 50 RRLLDKPFREAYRPTRAFDVAYLPHGHHNGAPVLVELWDVAGAQLSAVPSHHALIAMGAAAALVVVDAASAPSLAAADAWNGALAEHLPPRAVKMLVAHKXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPAVKMLGVHKVDLPRCVVDKAAMDAYAAAAGFRAGWCCTVGAPQFGDYSV----------RGSERRRAVTAKQLTVQEALRRVVDTALR 257
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A484DS36_BRELC (SH2 domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DS36_BRELC) HSP 1 Score: 120 bits (300), Expect = 1.630e-26 Identity = 65/156 (41.67%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 148 IKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRPVMLHLWDVAGAQAHASPNH-HGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLG-KDVCKLLVGHKADL-PAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
IKI LVGGP VGKTSIVRR R ++ Y PT G D + + ++ G+ ++LH+WDV+ A+ AS + H LLC D + FV +V +S+ A+D W LS YL K++ L+ HKADL V+ + AYA G++ W TVG +G+
Sbjct: 68 IKIALVGGPAVGKTSIVRRWLQRSYLTTYSPTVGVDILTTKH-SHHGKEILLHIWDVSSAEVDASASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKEIPSFLISHKADLIQKRVMTSNDIAAYARMGGYRGWMWTVGRANFGE 222
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: G4ZB67_PHYSP (SH2 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZB67_PHYSP) HSP 1 Score: 119 bits (297), Expect = 3.880e-26 Identity = 67/156 (42.95%), Postives = 93/156 (59.62%), Query Frame = 1
Query: 148 IKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRPVMLHLWDVAGAQAHASPNH-HGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLG-KDVCKLLVGHKADL-PAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
+KI LVGG VGKTSIVRR R + Y PT G D + Y ++G+ ++LH+WDV+ A+ AS + H LLC D + FV +V +S+ A+D W LS YL K+V L+ HKADL V+ + + AYA A G++ W TVG P +G+
Sbjct: 56 LKIALVGGAAVGKTSIVRRWLQRSYPATYSPTIGVDVSSMTY-KHRGQELLLHVWDVSSAEVDASASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKEVPCFLISHKADLLQKRVMTSDDIAAYARAAGYKGWMWTVGKPNFGE 210
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A6G0WUA8_9STRA (SH2 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUA8_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.040e-25 Identity = 72/180 (40.00%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 82 SRDDPPETPRTGTADYGGREIVIKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRP---VMLHLWDVAGAQAHASPNHHGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLGK-DVCKLLVGHKAD-LPAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
S D + G G+E+ +KI LVGG VGK+SIVRR RP+ Y T G D I Y Y+G P + LH+WDV+ + SP H LLC V FV +V +S+ AVDAW +LS Y+ +V L+ HKAD L V+ + ++AYA G++ W TVG G G+
Sbjct: 22 SDSDTSQAEANGAPPQVGQEVHLKIALVGGHGVGKSSIVRRWLKRPYQAAYHQTIGVDVQTIKY-PYKGNPKEIIHLHIWDVSSVEVD-SPGFHELLCDGLDGVFFVFNVHRVSSIAAVDAWRTSLSKYISSSEVPCYLLSHKADMLQKRVMTSDDIEAYARTAGYKGWSWTVGRGGLGE 199
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A3F2RYJ8_9STRA (SH2 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RYJ8_9STRA) HSP 1 Score: 114 bits (286), Expect = 1.170e-24 Identity = 66/166 (39.76%), Postives = 92/166 (55.42%), Query Frame = 1
Query: 148 IKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRPVMLHLWDVAGAQAHASPNH-HGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLG-KDVCKLLVGHKADL-----------PAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
+KI LVGG VGKTSIVRR R + Y PT G D + Y +++G+ ++LHLWDVA ++ AS + H LLC D + FV +V +S+ A+D W LS YL K++ L+ HKADL A+ EA+ A G++ W TVG P +G+
Sbjct: 74 LKIALVGGSAVGKTSIVRRWLQRSYPTTYSPTIGVDVATMSY-SHRGQELLLHLWDVASSEVDASASSLHALLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKEIPCFLISHKADLLQKRVMTSDDIAAYAQVSEALLRVKPAAGYKGWMWTVGKPNFGE 238
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A225WLJ6_9STRA (SH2 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WLJ6_9STRA) HSP 1 Score: 112 bits (280), Expect = 6.590e-24 Identity = 64/156 (41.03%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 148 IKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRPVMLHLWDVAGAQAHASPNH-HGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLG-KDVCKLLVGHKADL-PAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
+KI LVGG VGKTSIVRR R + Y PT G D + Y ++G+ ++L LWDV+ A+ AS + H LLC D + FV +V +S+ A+D W LS Y+ K++ L+ HKADL V+ + + AYA A G++ W TVG +G+
Sbjct: 54 LKIALVGGSAVGKTSIVRRWLQRSYPTTYSPTIGVDVSTMTYN-HRGQELLLQLWDVSSAEVDASASSLHALLCDDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYMSPKEIPCFLISHKADLLQKRVMTSDDIAAYARAGGYKGWMWTVGKANFGE 208
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A0P1AVU5_PLAHL (Ras family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AVU5_PLAHL) HSP 1 Score: 112 bits (279), Expect = 9.670e-24 Identity = 63/156 (40.38%), Postives = 91/156 (58.33%), Query Frame = 1
Query: 148 IKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRPVMLHLWDVAGAQAHASPNH-HGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLG-KDVCKLLVGHKADL-PAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
+KI LVGG VGKTSIVRR R + Y+PT G D + Y ++G+ ++L +WDV+ A+ AS + H LLC D + FV +V +S+ A+D W LS YL K+ L+ HKADL V+ + + AYA+ G++ W TVG +G+
Sbjct: 79 LKIALVGGSAVGKTSIVRRWLQRSYPVTYLPTVGVDVYSMKY-EHRGKELLLSIWDVSSAEVDASASSLHSLLCEDLDGIFFVFNVHRVSSIAAIDKWRHCLSKYLSPKETPCFLISHKADLLQKRVITSDDIAAYAKTAGYRGWMWTVGKATFGE 233
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A485KYD9_9STRA (Aste57867_13345 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KYD9_9STRA) HSP 1 Score: 111 bits (278), Expect = 9.840e-24 Identity = 72/185 (38.92%), Postives = 99/185 (53.51%), Query Frame = 1
Query: 64 TRSRPASRDDPPETPRTGTADYGGREIVIKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPYGTYQGRP--VMLHLWDVAGAQAHASPNHHGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLGKDVCKL-LVGHKAD-LPAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
T++ P S D P + P+ E+ +KI LVGG VGK+SIVRR RP+ Y T G D I Y Y+ + + LH+WDV+ A+ SP+ H LLC V FV +V +S+ AVDAW L Y+ L+ HKAD L V+ + ++AYA G++ WC TVG G G+
Sbjct: 34 TQATPGSNDRPLQVPQ---------EVHLKIALVGGNGVGKSSIVRRWLKRPYQAAYHQTIGVDVHTIKY-PYKEKDSSLYLHIWDVSSAEVD-SPSFHELLCDRLDGVFFVFNVHRVSSIAAVDAWRTRLGQYISASETPFYLLSHKADMLQKRVMTSDDIEAYARTAGYKGWCWTVGRGGLGE 207
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Match: A0A024U7M0_9STRA (SH2 domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7M0_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.080e-23 Identity = 64/162 (39.51%), Postives = 91/162 (56.17%), Query Frame = 1
Query: 136 REIVIKILLVGGPQVGKTSIVRRLTNRPFMEDYVPTTGFDFIVIPY---GTYQGRPVMLHLWDVAGAQAHASPNHHGLLCVDASAVMFVLDVSSAASLGAVDAWHAALSPYLGK-DVCKLLVGHKAD-LPAFVVGREAMDAYAEACGFQDWCLTVGSPGYGD 606
RE+ +K+ +VGG VGK+SIVRR RP+ Y PT G D I Y G + P+ + +WDV+ A+ + SP H LLC + FV +V +S+ AVDAW AL ++ ++ L+ HKAD L V+ + +DAY GF+ W TVG G G+
Sbjct: 43 RELHMKVAIVGGNGVGKSSIVRRWLKRPYQSAYHPTIGVDVHTIKYSKRGASKDSPIYVDVWDVSCAEVN-SPAFHELLCTGLDGIFFVFNVHRVSSIAAVDAWQTALGKFISSSEIPFYLLSHKADMLQKRVMTSDDIDAYVRTAGFKGWSWTVGRAGLGE 203 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20757.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20757.1 >prot_S-ischiensis_contig9.20757.1 ID=prot_S-ischiensis_contig9.20757.1|Name=mRNA_S-ischiensis_contig9.20757.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=317bp VVPPPATRAPHSTSRVFGAMPTRSRPASRDDPPETPRTGTADYGGREIVIback to top mRNA from alignment at S-ischiensis_contig9:2981097..2987196+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20757.1 ID=mRNA_S-ischiensis_contig9.20757.1|Name=mRNA_S-ischiensis_contig9.20757.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6100bp|location=Sequence derived from alignment at S-ischiensis_contig9:2981097..2987196+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2981097..2987196+ >mRNA_S-ischiensis_contig9.20757.1 ID=mRNA_S-ischiensis_contig9.20757.1|Name=mRNA_S-ischiensis_contig9.20757.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1902bp|location=Sequence derived from alignment at S-ischiensis_contig9:2981097..2987196+ (Schizocladia ischiensis KU_0333)back to top |