mRNA_S-ischiensis_contig9.20745.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA) HSP 1 Score: 241 bits (615), Expect = 1.390e-73 Identity = 127/259 (49.03%), Postives = 190/259 (73.36%), Query Frame = 1
Query: 199 QILVGVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAAT---DGEDMLDGDEGTDGASAGAE-----LVILIVGVAATVLALVLITWYSRKALKEALVDAELERS 951
++ +G+ LV + +++I+D++VP L N++ L+DFL WVED+P GV FA ++ T+ FIPG +LT+GAGL FGRA+G+G G+ LGS AV++G G+I+AF+LGRY+LQ+ AQ +KFKI+ A++ A+ +G++L +L+RLSPVVP+ FNYI GLT ++L+DYTIGCLGIIPGTVA+VFIG+SA+G + E+ D + DG + ++ L+++IVG ATV+A+ LI+WY++KAL L + ELE +
Sbjct: 26 KLCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGIGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEEN 284
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI) HSP 1 Score: 229 bits (583), Expect = 1.430e-68 Identity = 122/243 (50.21%), Postives = 177/243 (72.84%), Query Frame = 1
Query: 238 FIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELERSVVDAG 966
++ILD+TVPGL ++ L FL WVED+PG G L FA+++ T+ FIPG +LT+GAGL FGRA+G G GIL+GS+AV+ G GSI+AFLLGR++LQE+AQ +KFK+L A+N A++ +G++L++L+RLSPVVP++ FNY+ G+T V RDY IGC+G IPGTVAFVFIG +A+G G+D + +L++ IVG ATV+A+VLI+ Y+++AL + L + +E+ ++ G
Sbjct: 57 YVILDYTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLL--GDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVEQEALEMG 297
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE) HSP 1 Score: 223 bits (568), Expect = 4.960e-66 Identity = 114/224 (50.89%), Postives = 170/224 (75.89%), Query Frame = 1
Query: 274 NISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELE 945
N+ L W+ED+P AGV++FA++F ++T+LF+PG++LT+GAG+AFGRA+G G G+L GSVAV++G + ++AF LGRY+L E+AQ A +++IL+A+N A+ + GV++M+L+RLSP+VP++ FN+IAGLT V+LRDY +G +GI+PGT+AFV+IGAS AG + E M G+ D + LIVG A VLA+V +T Y+R+ALK+ALV++EL+
Sbjct: 88 NVRTWLETSFEWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGE--ADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELD 309
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK) HSP 1 Score: 197 bits (501), Expect = 1.200e-56 Identity = 110/246 (44.72%), Postives = 159/246 (64.63%), Query Frame = 1
Query: 220 LVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAG---------AELVILIVGVAATVLALVLITWYSRKALKEALV 930
LV I ++++LD+T+P L +++ L FL WVE+HPG GV+ FA ++ + T+LFIPG +LT+GAGL FGRA+ +AFLLGRY+LQ+ AQ+ +KF +L A++ A+ +G+RL++L+RLSPV+P++ FNY+ GLT V R Y +GC+G++PGTVA+VFIG SAAG D +D E +V+L+VG AATVLA+VLIT SR+AL+ L+
Sbjct: 57 LVGIIIYVVLDYTLPSLGHVNRILTSFLLWVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVLM 302
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: D7G9F3_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F3_ECTSI) HSP 1 Score: 194 bits (492), Expect = 1.160e-55 Identity = 104/234 (44.44%), Postives = 162/234 (69.23%), Query Frame = 1
Query: 91 STAVLSERSLPI--RRLYSLEDVTGDMEQADAFRRHRTQILVGVTLVAIAVFIILDFTVPGLM------NISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAG 768
+T V++E LP R + E D E A + + V + I +F+++ V ++ N+ L W+ED+P AGV++FA++F ++T+LF+PG++LT+GAG+AFGRA+G G G+L GSVAV++G + ++AF LGRY+L E+AQ A +++IL+A+N A+ + GV++M+L+RLSP+VP++ FN+IAGLT V+LRDY +G +GI+PGT+AFV+IGAS AG
Sbjct: 21 TTPVVTEGPLPRQHREYATAERAAMDEEVGQAVEKDNER--VNQRIKRIMMFVVVALVVSAIVDIACHDNVRTWLETSFDWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAG 252
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA) HSP 1 Score: 175 bits (444), Expect = 4.960e-48 Identity = 98/240 (40.83%), Postives = 154/240 (64.17%), Query Frame = 1
Query: 211 GVTLVAIAVFIILDF-TVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEAL 927
G+ LV +++I+D T M I A DFL W+ED+P AGV F ++ IA+I FIPG++LT+GAG F A+G+G GI L +VAV G G+ +FL+GRY+L++ + K I AI+AAL+ KG+R+M+L+R+SP+VP+ VFNY+AG+T ++LRDY IG +GI+PGT+ ++ +G+SA D + G + ++ +++G+ VL + T+Y++K L + L
Sbjct: 33 GLILVGFIIYVIIDLATTKNTMRIVA---DFLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSSAGSLV---------DSSSSGNDSTVRIISIVLGIVFAVLGVYATTYYAKKELNKIL 260
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA) HSP 1 Score: 174 bits (442), Expect = 6.050e-48 Identity = 98/266 (36.84%), Postives = 169/266 (63.53%), Query Frame = 1
Query: 166 EQADAFRRHRT-QILVGVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELERSVVD 960
EQA R+ R +I +G+ LV +++I+DF ++ + FL W+ED+P GV F ++ +ATILF PG++LT+GAG F A+G+G G++L + AV +G GS+ AFL+GRY+L++ K+ I A++ AL++KG+R+M+L+RLSP++P+ NYI G+T V+ RD+TI +GI+PGT+ +VF+G+SA G+ TD + G ++ ++ +++G +L + + ++Y+RK L+ + E E + ++
Sbjct: 20 EQAREKRKARLIKIALGLLLVGFIIYVIVDFATS--KHLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSSA-GSLTDSS--------SGGDNSAVRILTIVLGSVFGILGVCVTSYYARKELQNVISRREAEAAQLE 274
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA) HSP 1 Score: 172 bits (437), Expect = 1.710e-47 Identity = 106/269 (39.41%), Postives = 166/269 (61.71%), Query Frame = 1
Query: 166 EQADAFRRHRTQILV-GVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELERSVVDAGG 969
E A RR R + LV + L+ VF+I+D T G I G+ FL W+E++P G +F ++ +AT+LF+PG++LT+GAG F A G G G+ +G+++V +G GS++AFL+ RYIL+E A KF I AI+ AL +KG+++++L+RLSPV+P+ NY+ G+T V+ +DY++ ++PGT+ +VF+GASA AT G TD S + ++VGV ++A+ L + Y++K L + L D E E + AGG
Sbjct: 6 EARSALRRSRIKKLVLALVLIGFIVFVIIDSTTNGY--IKDGIQTFLRWIEENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISVFVGASLGSMLAFLISRYILREWAVGLTEKFPIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLATIGSS-------TD--SKALTISTVVVGVVLGIVAVALSSRYAKKELNKIL-DQEEEANERIAGG 262
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S1DCG4_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCG4_CYCTE) HSP 1 Score: 174 bits (440), Expect = 4.130e-47 Identity = 99/260 (38.08%), Postives = 163/260 (62.69%), Query Frame = 1
Query: 205 LVGVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKAL------KEALVDAELERSVVDAG 966
++G+ L+A V++I+D G N+ + + FL W+ED+P G F +++ +ATILF+PG +LT+G+G F A G+G G+L+GS++V G +G+I++FLLGRY+L+E + K+ I A++ AL +KG R+M L+RLSP++P+ NYI G+T ++L YT+ + I+PGTV +VF+GASA A D + G +A ++++ VG A+ L ++Y++K L +EA +E ER V++G
Sbjct: 85 VIGLLLLAFIVYVIVDSITTG--NVRSIIGSFLEWIEDNPIPGFFAFMIVYFVATILFVPGSILTLGSGFVFANAFGLGPGVLIGSLSVFFGASSGAIVSFLLGRYLLREWVKGLTKKYAIFEALDVALEEKGFRIMALLRLSPIIPFNAINYIGGVTALSLYAYTLALIAILPGTVLYVFLGASAGSLA---------DSASSGNNATVTIIVVAVGCVFGFAAIFLTSYYAKKELNRVIDAREATNSSEDERGDVESG 333
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A2R5H097_9STRA (Golgi apparatus membrane protein TVP38 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H097_9STRA) HSP 1 Score: 174 bits (440), Expect = 5.280e-47 Identity = 100/226 (44.25%), Postives = 150/226 (66.37%), Query Frame = 1
Query: 277 ISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGC-LGIIPGTVAFVFIGASAAGAATDGEDMLD-GDEGTD------GASAGAE---LVILIVGVAATVLALVLITWYSRKALKE 921
++ G L W+ +HPG G + A+++A+ T+ IPG VLT+G+G+AFG A+G+G G + + AV++G G+ MAFL+GRY+L+E QWA KF+++ A++ AL +G R+ +L+RLSP+VP+ VFN+I G T LRDY + LGIIPGT AFVFIGA AA +G M + D G+ SA A+ +VI++VG+ AT+LA+VL+T R+ ++
Sbjct: 108 LAVGFQAVLEWISEHPGEGWAVTALVYAVLTMALIPGSVLTIGSGVAFGTALGLGKGTAVAATAVIVGASVGATMAFLMGRYLLREVINQWAKKFRVIKALDKALETQGFRITLLLRLSPIVPFNVFNFIMGSTSCELRDYVLATSLGIIPGTFAFVFIGALVGSAAFEGTSMANLSDNGSQVYPDLCEESAQAKTIRIVIIVVGIVATILAVVLLTIVGRRQFRK 333 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20745.1 >prot_S-ischiensis_contig9.20745.1 ID=prot_S-ischiensis_contig9.20745.1|Name=mRNA_S-ischiensis_contig9.20745.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=384bp MADVSWRARPSTAVLSERSLPIRRLYSLEDVTGDMEQADAFRRHRTQILVback to top mRNA from alignment at S-ischiensis_contig9:2921554..2925769+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20745.1 ID=mRNA_S-ischiensis_contig9.20745.1|Name=mRNA_S-ischiensis_contig9.20745.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4216bp|location=Sequence derived from alignment at S-ischiensis_contig9:2921554..2925769+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2921554..2925769+ >mRNA_S-ischiensis_contig9.20745.1 ID=mRNA_S-ischiensis_contig9.20745.1|Name=mRNA_S-ischiensis_contig9.20745.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2304bp|location=Sequence derived from alignment at S-ischiensis_contig9:2921554..2925769+ (Schizocladia ischiensis KU_0333)back to top |