mRNA_S-ischiensis_contig9.20745.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20745.1
Unique NamemRNA_S-ischiensis_contig9.20745.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S2Y1P9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1P9_9STRA)

HSP 1 Score: 241 bits (615), Expect = 1.390e-73
Identity = 127/259 (49.03%), Postives = 190/259 (73.36%), Query Frame = 1
Query:  199 QILVGVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAAT---DGEDMLDGDEGTDGASAGAE-----LVILIVGVAATVLALVLITWYSRKALKEALVDAELERS 951
            ++ +G+ LV + +++I+D++VP L N++  L+DFL WVED+P  GV  FA ++   T+ FIPG +LT+GAGL FGRA+G+G G+ LGS AV++G   G+I+AF+LGRY+LQ+ AQ   +KFKI+ A++ A+  +G++L +L+RLSPVVP+  FNYI GLT ++L+DYTIGCLGIIPGTVA+VFIG+SA+G      + E+  D  +  DG  + ++     L+++IVG  ATV+A+ LI+WY++KAL   L + ELE +
Sbjct:   26 KLCLGLVLVGLIIYVIVDYSVPSLGNVNIVLSDFLAWVEDNPIEGVFAFACVYMFCTVAFIPGSLLTLGAGLVFGRALGIGRGVALGSFAVILGASIGAIIAFILGRYVLQDTAQVLFNKFKIMRAVDKAIESQGLKLCLLLRLSPVVPFNAFNYIMGLTAISLKDYTIGCLGIIPGTVAYVFIGSSASGIGDMKGNDEEQNDNTKDADGEESSSDNDTVFLIVIIVGAIATVIAVFLISWYAKKALNRILNEVELEEN 284          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: D7FIK1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK1_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 1.430e-68
Identity = 122/243 (50.21%), Postives = 177/243 (72.84%), Query Frame = 1
Query:  238 FIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELERSVVDAG 966
            ++ILD+TVPGL  ++  L  FL WVED+PG G L FA+++   T+ FIPG +LT+GAGL FGRA+G G GIL+GS+AV+ G   GSI+AFLLGR++LQE+AQ   +KFK+L A+N A++ +G++L++L+RLSPVVP++ FNY+ G+T V  RDY IGC+G IPGTVAFVFIG +A+G    G+D  +            +L++ IVG  ATV+A+VLI+ Y+++AL + L +  +E+  ++ G
Sbjct:   57 YVILDYTVPGLGFVADTLTSFLEWVEDNPGLGALAFALVYVFTTVCFIPGSLLTLGAGLVFGRALGTGLGILVGSLAVLAGATVGSILAFLLGRFVLQEQAQGLFNKFKVLKAVNRAIKSQGLKLVILLRLSPVVPFSAFNYVMGVTDVFFRDYAIGCVGFIPGTVAFVFIGTTASGLL--GDDSEEXXXXXXXXXGTVQLIVGIVGGIATVIAVVLISIYAKRALNKVLEEDRVEQEALEMG 297          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A6H5JID7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JID7_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 4.960e-66
Identity = 114/224 (50.89%), Postives = 170/224 (75.89%), Query Frame = 1
Query:  274 NISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELE 945
            N+   L     W+ED+P AGV++FA++F ++T+LF+PG++LT+GAG+AFGRA+G G G+L GSVAV++G +   ++AF LGRY+L E+AQ  A +++IL+A+N A+ + GV++M+L+RLSP+VP++ FN+IAGLT V+LRDY +G +GI+PGT+AFV+IGAS AG   + E M  G+   D       +  LIVG  A VLA+V +T Y+R+ALK+ALV++EL+
Sbjct:   88 NVRTWLETSFEWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAGTMNEQEAMNSGE--ADRTECIIRMATLIVGAVAAVLAIVAVTIYARRALKQALVESELD 309          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S3YEX9_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YEX9_HETAK)

HSP 1 Score: 197 bits (501), Expect = 1.200e-56
Identity = 110/246 (44.72%), Postives = 159/246 (64.63%), Query Frame = 1
Query:  220 LVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAG---------AELVILIVGVAATVLALVLITWYSRKALKEALV 930
            LV I ++++LD+T+P L +++  L  FL WVE+HPG GV+ FA ++ + T+LFIPG +LT+GAGL FGRA+                      +AFLLGRY+LQ+ AQ+  +KF +L A++ A+  +G+RL++L+RLSPV+P++ FNY+ GLT V  R Y +GC+G++PGTVA+VFIG SAAG   D +D     E                   +V+L+VG AATVLA+VLIT  SR+AL+  L+
Sbjct:   57 LVGIIIYVVLDYTLPSLGHVNRILTSFLLWVEEHPGEGVVAFASVYVLTTVLFIPGSILTLGAGLVFGRALXXXXXXXXXXXXXXXXXXXXXXIAFLLGRYVLQDSAQKLFNKFSVLKAVDKAIENEGLRLVILLRLSPVIPFSAFNYVMGLTRVMFRQYVLGCVGMLPGTVAYVFIGTSAAGLLGDADDGSQESEXXXXXXXXXXXXXXXRLVNIVVLVVGAAATVLAVVLITVASRRALRRVLM 302          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: D7G9F3_ECTSI (Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9F3_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 1.160e-55
Identity = 104/234 (44.44%), Postives = 162/234 (69.23%), Query Frame = 1
Query:   91 STAVLSERSLPI--RRLYSLEDVTGDMEQADAFRRHRTQILVGVTLVAIAVFIILDFTVPGLM------NISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAG 768
            +T V++E  LP   R   + E    D E   A  +   +  V   +  I +F+++   V  ++      N+   L     W+ED+P AGV++FA++F ++T+LF+PG++LT+GAG+AFGRA+G G G+L GSVAV++G +   ++AF LGRY+L E+AQ  A +++IL+A+N A+ + GV++M+L+RLSP+VP++ FN+IAGLT V+LRDY +G +GI+PGT+AFV+IGAS AG
Sbjct:   21 TTPVVTEGPLPRQHREYATAERAAMDEEVGQAVEKDNER--VNQRIKRIMMFVVVALVVSAIVDIACHDNVRTWLETSFDWIEDNPKAGVVVFALLFCLSTLLFVPGLLLTIGAGVAFGRALGFGFGVLWGSVAVLLGAVVACVIAFYLGRYVLHEQAQSCAKRYRILSAVNTAIERNGVKVMILLRLSPLVPFSGFNFIAGLTKVSLRDYLLGTVGIVPGTLAFVYIGASTAG 252          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S4W131_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W131_9STRA)

HSP 1 Score: 175 bits (444), Expect = 4.960e-48
Identity = 98/240 (40.83%), Postives = 154/240 (64.17%), Query Frame = 1
Query:  211 GVTLVAIAVFIILDF-TVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEAL 927
            G+ LV   +++I+D  T    M I A   DFL W+ED+P AGV  F  ++ IA+I FIPG++LT+GAG  F  A+G+G GI L +VAV  G   G+  +FL+GRY+L++   +   K  I  AI+AAL+ KG+R+M+L+R+SP+VP+ VFNY+AG+T ++LRDY IG +GI+PGT+ ++ +G+SA             D  + G  +   ++ +++G+   VL +   T+Y++K L + L
Sbjct:   33 GLILVGFIIYVIIDLATTKNTMRIVA---DFLDWIEDNPAAGVFAFIGVYIIASIFFIPGLILTLGAGFVFANALGLGVGIFLATVAVFFGAFFGACASFLIGRYLLRDCVGKLTKKRVIFEAIDAALKDKGLRIMILLRVSPLVPFNVFNYVAGVTSISLRDYAIGMIGILPGTLLYILLGSSAGSLV---------DSSSSGNDSTVRIISIVLGIVFAVLGVYATTYYAKKELNKIL 260          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S2MII1_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MII1_9STRA)

HSP 1 Score: 174 bits (442), Expect = 6.050e-48
Identity = 98/266 (36.84%), Postives = 169/266 (63.53%), Query Frame = 1
Query:  166 EQADAFRRHRT-QILVGVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELERSVVD 960
            EQA   R+ R  +I +G+ LV   +++I+DF      ++   +  FL W+ED+P  GV  F  ++ +ATILF PG++LT+GAG  F  A+G+G G++L + AV +G   GS+ AFL+GRY+L++       K+ I  A++ AL++KG+R+M+L+RLSP++P+   NYI G+T V+ RD+TI  +GI+PGT+ +VF+G+SA G+ TD          + G ++   ++ +++G    +L + + ++Y+RK L+  +   E E + ++
Sbjct:   20 EQAREKRKARLIKIALGLLLVGFIIYVIVDFATS--KHLRTAMESFLNWIEDNPTEGVFAFMGVYFVATILFAPGLILTLGAGFVFANALGLGLGVVLATTAVFVGASTGSMAAFLIGRYLLRDWVVGLTKKYAIFEAVDVALKEKGLRIMILLRLSPLIPFNALNYIVGVTSVSFRDFTIAMIGILPGTLLYVFLGSSA-GSLTDSS--------SGGDNSAVRILTIVLGSVFGILGVCVTSYYARKELQNVISRREAEAAQLE 274          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S4JVV3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVV3_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.710e-47
Identity = 106/269 (39.41%), Postives = 166/269 (61.71%), Query Frame = 1
Query:  166 EQADAFRRHRTQILV-GVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELERSVVDAGG 969
            E   A RR R + LV  + L+   VF+I+D T  G   I  G+  FL W+E++P  G  +F  ++ +AT+LF+PG++LT+GAG  F  A G G G+ +G+++V +G   GS++AFL+ RYIL+E A     KF I  AI+ AL +KG+++++L+RLSPV+P+   NY+ G+T V+ +DY++    ++PGT+ +VF+GASA   AT G         TD  S    +  ++VGV   ++A+ L + Y++K L + L D E E +   AGG
Sbjct:    6 EARSALRRSRIKKLVLALVLIGFIVFVIIDSTTNGY--IKDGIQTFLRWIEENPIEGFFMFMGVYVLATVLFVPGLILTLGAGYVFSNAFGTGLGLFVGTISVFVGASLGSMLAFLISRYILREWAVGLTEKFPIFRAIDQALEEKGLKIIILLRLSPVIPFNALNYVCGVTAVSFKDYSLALFAMLPGTILYVFLGASAQSLATIGSS-------TD--SKALTISTVVVGVVLGIVAVALSSRYAKKELNKIL-DQEEEANERIAGG 262          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A7S1DCG4_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DCG4_CYCTE)

HSP 1 Score: 174 bits (440), Expect = 4.130e-47
Identity = 99/260 (38.08%), Postives = 163/260 (62.69%), Query Frame = 1
Query:  205 LVGVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEGTDGASAGAELVILIVGVAATVLALVLITWYSRKAL------KEALVDAELERSVVDAG 966
            ++G+ L+A  V++I+D    G  N+ + +  FL W+ED+P  G   F +++ +ATILF+PG +LT+G+G  F  A G+G G+L+GS++V  G  +G+I++FLLGRY+L+E  +    K+ I  A++ AL +KG R+M L+RLSP++P+   NYI G+T ++L  YT+  + I+PGTV +VF+GASA   A         D  + G +A   ++++ VG      A+ L ++Y++K L      +EA   +E ER  V++G
Sbjct:   85 VIGLLLLAFIVYVIVDSITTG--NVRSIIGSFLEWIEDNPIPGFFAFMIVYFVATILFVPGSILTLGSGFVFANAFGLGPGVLIGSLSVFFGASSGAIVSFLLGRYLLREWVKGLTKKYAIFEALDVALEEKGFRIMALLRLSPIIPFNAINYIGGVTALSLYAYTLALIAILPGTVLYVFLGASAGSLA---------DSASSGNNATVTIIVVAVGCVFGFAAIFLTSYYAKKELNRVIDAREATNSSEDERGDVESG 333          
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Match: A0A2R5H097_9STRA (Golgi apparatus membrane protein TVP38 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H097_9STRA)

HSP 1 Score: 174 bits (440), Expect = 5.280e-47
Identity = 100/226 (44.25%), Postives = 150/226 (66.37%), Query Frame = 1
Query:  277 ISAGLNDFLTWVEDHPGAGVLLFAVIFAIATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFLLGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFNYIAGLTPVTLRDYTIGC-LGIIPGTVAFVFIGASAAGAATDGEDMLD-GDEGTD------GASAGAE---LVILIVGVAATVLALVLITWYSRKALKE 921
            ++ G    L W+ +HPG G  + A+++A+ T+  IPG VLT+G+G+AFG A+G+G G  + + AV++G   G+ MAFL+GRY+L+E   QWA KF+++ A++ AL  +G R+ +L+RLSP+VP+ VFN+I G T   LRDY +   LGIIPGT AFVFIGA    AA +G  M +  D G+         SA A+   +VI++VG+ AT+LA+VL+T   R+  ++
Sbjct:  108 LAVGFQAVLEWISEHPGEGWAVTALVYAVLTMALIPGSVLTIGSGVAFGTALGLGKGTAVAATAVIVGASVGATMAFLMGRYLLREVINQWAKKFRVIKALDKALETQGFRITLLLRLSPIVPFNVFNFIMGSTSCELRDYVLATSLGIIPGTFAFVFIGALVGSAAFEGTSMANLSDNGSQVYPDLCEESAQAKTIRIVIIVVGIVATILAVVLLTIVGRRQFRK 333          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20745.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2Y1P9_9STRA1.390e-7349.03Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FIK1_ECTSI1.430e-6850.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JID7_9PHAE4.960e-6650.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3YEX9_HETAK1.200e-5644.72Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D7G9F3_ECTSI1.160e-5544.44Hypothetical UPF0043 protein slr0305 n=1 Tax=Ectoc... [more]
A0A7S4W131_9STRA4.960e-4840.83Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2MII1_9STRA6.050e-4836.84Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4JVV3_9STRA1.710e-4739.41Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S1DCG4_CYCTE4.130e-4738.08Hypothetical protein n=2 Tax=Cyclophora tenuis Tax... [more]
A0A2R5H097_9STRA5.280e-4744.25Golgi apparatus membrane protein TVP38 n=1 Tax=Hon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2921554..2925769 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score228.4
Seed ortholog evalue5.6e-57
Seed eggNOG ortholog2880.D7FIK1
KEGG rclassRC00046
KEGG koko:K00486
KEGG ReactionR01960
KEGG Pathwayko00380,ko01100,map00380,map01100
KEGG ModuleM00038
EggNOG free text desc.canonical Wnt signaling pathway involved in osteoblast differentiation
EggNOG OGsCOG0398@1,KOG3140@2759
EC1.14.13.9
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categorysignal anchor
Ec32 ortholog descriptionPutative SNARE-associated Golgi protein
Ec32 orthologEc-28_000720.1
Exons4
Model size1214
Cds size1152
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20745.1prot_S-ischiensis_contig9.20745.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 2921614..2925769 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817399.045603-UTR-S-ischiensis_contig9:2921553..29216131622817399.045603-UTR-S-ischiensis_contig9:2921553..2921613Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 2921554..2921613 +
1695741084.9757981-UTR-S-ischiensis_contig9:2921553..29216131695741084.9757981-UTR-S-ischiensis_contig9:2921553..2921613Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 2921554..2921613 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817399.057659-CDS-S-ischiensis_contig9:2921613..29218841622817399.057659-CDS-S-ischiensis_contig9:2921613..2921884Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2921614..2921884 +
1695741084.9897118-CDS-S-ischiensis_contig9:2921613..29218841695741084.9897118-CDS-S-ischiensis_contig9:2921613..2921884Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2921614..2921884 +
1622817399.0708413-CDS-S-ischiensis_contig9:2923083..29232701622817399.0708413-CDS-S-ischiensis_contig9:2923083..2923270Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2923084..2923270 +
1695741085.0008192-CDS-S-ischiensis_contig9:2923083..29232701695741085.0008192-CDS-S-ischiensis_contig9:2923083..2923270Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2923084..2923270 +
1622817399.0828629-CDS-S-ischiensis_contig9:2924657..29249251622817399.0828629-CDS-S-ischiensis_contig9:2924657..2924925Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2924658..2924925 +
1695741085.0111578-CDS-S-ischiensis_contig9:2924657..29249251695741085.0111578-CDS-S-ischiensis_contig9:2924657..2924925Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2924658..2924925 +
1622817399.0959911-CDS-S-ischiensis_contig9:2925343..29257691622817399.0959911-CDS-S-ischiensis_contig9:2925343..2925769Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2925344..2925769 +
1695741085.022047-CDS-S-ischiensis_contig9:2925343..29257691695741085.022047-CDS-S-ischiensis_contig9:2925343..2925769Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2925344..2925769 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20745.1

>prot_S-ischiensis_contig9.20745.1 ID=prot_S-ischiensis_contig9.20745.1|Name=mRNA_S-ischiensis_contig9.20745.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=384bp
MADVSWRARPSTAVLSERSLPIRRLYSLEDVTGDMEQADAFRRHRTQILV
GVTLVAIAVFIILDFTVPGLMNISAGLNDFLTWVEDHPGAGVLLFAVIFA
IATILFIPGVVLTVGAGLAFGRAMGMGHGILLGSVAVVMGGIAGSIMAFL
LGRYILQEKAQQWASKFKILAAINAALRKKGVRLMVLIRLSPVVPYAVFN
YIAGLTPVTLRDYTIGCLGIIPGTVAFVFIGASAAGAATDGEDMLDGDEG
TDGASAGAELVILIVGVAATVLALVLITWYSRKALKEALVDAELERSVVD
AGGLERTPPSSTTAAAAAAAAAAAADPGGLRAPDHDGDGDGGGKKNAGER
EGEGGHALQTDGGPEGTIGEGGAGHPKVGERESS
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mRNA from alignment at S-ischiensis_contig9:2921554..2925769+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20745.1 ID=mRNA_S-ischiensis_contig9.20745.1|Name=mRNA_S-ischiensis_contig9.20745.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4216bp|location=Sequence derived from alignment at S-ischiensis_contig9:2921554..2925769+ (Schizocladia ischiensis KU_0333)
CGATTGGGCGCTAAATAGCCCGAGGTCGCGGTTTGAGGGAACGCTGCCTC AGGGGGCGACATGGCGGACGTCAGTTGGCGTGCACGCCCATCGACGGCTG TCTTGTCCGAGAGATCCCTGCCCATTCGCCGTTTGTACAGTCTGGAAGAT GTTACTGGGGATATGGAGCAGGCGGACGCTTTCCGTCGGCACAGGACCCA AATACTCGTCGGAGTCACACTGGTGGCCATCGCCGTCTTTATCATCTTGG ACTTCACCGTCCCGGGCCTCATGAACATCAGCGCGGGGCTCAATGACTTT TTGACATGGGTTGAGGACCACCCCGGGGCCGGTGAGGGAGCTCGTCGAAT CTCTGGGTAGATGGATCGCGGTGCCCCTTTTCGTGCCTGGTCGCCCAACT AGGACGATAGTTACCTTGTACGTGAAATGTTCGAGCGCTTTAAATCTCAT ACACGCAAGCGCTCACACACACAAGTGCAAACCTACATATACACATGCGC GCGAGCACACGTGCATGCATGCACGCACGTGCGGGCGCACACATGCAGAC ACACCCATGTACGCACGTACGAACACACACTTGCGTGCATGTACGCACGT ACGAACGCACACGCTTGCGTGCATCTACACACGCACACACTCTCACTCAC CCATGGCAAGCAGCAGGCTATCCTGTTCCCTACGGACCGGCCACACCTCC CCCTTGAGCTCTTATTTAGCGAATCTCCCCACTTCCCCACACCCGTGCTG GGAACCTCCACTGCCGTGCCGTATATTGGGGCAGCGCAGCGCGCCCCTCA CCCTAGCCCTGTCACGTGAACTTCAGTGTGGTACCGCTTCGGATACGTCG ACTGTACCTCGAAGATACGGCGGTGCTTGGAAGTAGTTCCAGTAGCGACA ATCTGTACTTACTTGCATATGCATTAGCTGCTCCGTCTCGACCGAGGTGC GTGGTCAATGGTCTCGGGACTACGGCAAGCACAACGTGAGTACTCGAGTA CATACATATATATATATATATATATCTTAGCCGTTCACGCCTGGCAAGCC TGTCAGGTTCAGTTAATGAAGTACTGCTGTACACGGTAGGCACCCGCGTT AGGTACCGCTCAGGTAAAAGCCAAGTGGGGCTTGATGAAAGTGCCGCACA CTCCATACCACATGGGTGAGATTGTGCGAGTACTCTACCTCGTTGCAATT TGTTTGAATCGCTGCTGGTGCTGTGCTTGGAAGTAGTCCTCGAGTATCAA GTATTTTTTTTTTCAAGTGATTGCAGCGACGCTCCTCTCTCTAGACATTG CGTTTAGATTCCCCTCCGGGAAGCAAAAAACAAGCCAAGCCGAGTGGGGT TTGATGGCCAAAGTACAGTACTCGAGCCGCAGTAATATACAGTGCTTGAG TGTTACGTACTCACTTTTTAGAACTCTTACACAGTTGCAAGCGACACCGC GCCCCTCTCTAAAACCGCACGCCCTGCTCTCGTCTCACATGCACTGACAC CACATTACCACCACACCGGTGCCCGGCCAGGCGTGCTTCTCTTTGCGGTG ATATTTGCCATCGCTACCATCCTGTTCATCCCGGGGGTGGTCCTCACCGT GGGGGCTGGCCTGGCCTTTGGGCGAGCCATGGGCATGGGGCACGGCATTT TGCTGGGGTCTGTGGCGGTCGTTATGGGGGGCATCGCGGGCTCCATCATG GCCTTCCTCCTCGGGAGGTATGGGCGTACTCGTGGCAGTGATGTTGTGTG ATTTATTTTCCAACTACAATTGTGAAGAGCGGGGGGGTGGCCACCCCCGC CGACCCTGGCTCTGCCAGGGGAGGGAGGGTTCCTGCTCCGTCTCGACCGG GGCGCGTGGTCAATGGTCTCGGGACTACGGCAAGCACAAGGGGAGTATTG GCAGGAACAACGCAGGGCGAGGTGCAGGCCATGTCACTAGATGCCTCAAC AGTGGCCCTTCCGCATAGCTCACCAGGGGAAATTTGTCGAATTGTTTGGG AGAAGGGGAGAAAAGGCGAGTACATGGTACACTGATTAATCGTACCTCGA AGTATGATATGATGTCATGTCATGCCATGTGTACTGGCTGACAGACAACG CCAGGGTAATCTCCAGGTTTGCCATATGATCATGGTACTTCCTACAAGCT GGTCCGGGCCAAAAGCCCAAAAACCTTCCGTGCCATTTCTCGCTCGAGTG TCGCGAGTTGGCCGATGAAATTTTGGACAGTATGGAGAGGAGCGTTACGA AGAATCGTATGGATGGCTCGGTTTGATTTTTTATTATTTTCAGTACGGGT CAATGGTCTAGGCACTACGGCAAGCACCACGTGAGTACATACTACGTAGT ATATATATCAGTACGGAGCGCGGTCAATGGTCTCAGGGCTACGGCAAGCG CAACGCGAGTACATGCTACTGTAGTATATTTGTGATCGTTCAGGACTGGA TATCTCGCCGAAAACAATCGCGGAAGGGCCATCCGTACGATTGTTCATAT TGGTCCGGTTCTGCCGAAGCCAACGCCGATTGGCTTAACTCACAAAGTTG CAACGAGAACTGTTGAACACACTTTGTGGGCATTACGGGCGACGCGTTCA TCGATAGGAGCACCTGGACTTTGATGACCATGGTGGCGCCGATGTCTGCA TTCCGTGACGACCACGTCGCTCCAGGACAAATGGGGCACATTGATATCTT CGTCTCATTGAGAGGATCATTTCGGTGTGCGTGGCTTGCCGCAACTCGTG GTAACTCTTGAGGTTTCGCATGTGGAAGGTTTCGGGGCTTTGCGGTGTGG AACTGTACAATGAATTGGAGTGCACATCACGTCGAATCACATCACATCAC ATCACACACGCGTTACCACATCGCAGGTACGTCCTGCAGGAGAAGAATCA CATCACACAGCACATCACATCACGTCACATCGCATCGAATCACATCGCAT CGCATCGCATCACATCACATCACATGAGCATCAAAATCACATCACACATC ACATCATATCACATCAGCATCAAATCACACCACATCACATCACACATCAC GTCACATAACATCGTATCGCATCACATCACATCACATCGCATCACGTCAC ACAGGTACATCCTGCAGGAGAAAGCACAGCAGTGGGCCTCCAAGTTCAAG ATCCTGGCCGCCATCAACGCCGCCCTCCGCAAGAAGGGCGTCCGCTTGAT GGTCCTCATCCGCCTCAGCCCCGTGGTCCCGTACGCGGTCTTCAACTACA TTGCCGGCCTCACGCCCGTGACCCTCCGTGACTACACCATAGGCTGCCTG GGCATCATACCGGGCACCGTGGCCTTTGTCTTCATCGGCGCCTCCGCGGC AGGCGCGGCCACGGATGGGGAGGTGAGGGGGGGGGGGTGGGGCGCCTCCC GCAGGACCGTAGCGAAATGGCAGCGGCCTTAAACTTCGGCGTGCCCCAGC CTGGCCCAGCCTGAATCTACCCCCTCCGTCGCTTTTTTGTGCGAAGTATG CGGTCAATGGTCTCGGGACTACGGCAAGCACAACGTGAGTACATATACAT ATACTTCGAAGTATGTGGTAAATGGTCTCGGGACTTCGGCAAGCACAACA TGAGTGCACATCTACATATGTACTCATTGTACGAGTATATATATAGAGTA TGTACTCATTGGCTTATATATATGTACTCGAGTACTCAATTGTATATATA CTCGAGTATGTACTCATTGGCTTGTCTTGCGACATAACCTTGCGTGCATT GCCGTCGCCATGTCATGTACATACGTACCTCCTCGTCCAGGACATGCTGG ACGGCGATGAGGGCACCGACGGCGCATCCGCGGGCGCCGAGCTCGTCATC CTCATCGTGGGCGTCGCCGCCACCGTCCTCGCCCTGGTCCTCATCACCTG GTACAGCCGCAAGGCCCTCAAGGAGGCCCTTGTCGACGCCGAACTGGAGC GAAGCGTGGTGGACGCCGGCGGCCTCGAGCGAACCCCCCCCTCCTCCACC ACCGCCGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCGCCGACCCCGGGGG TCTGCGAGCGCCCGATCACGACGGTGACGGTGACGGTGGCGGCAAAAAAA ACGCGGGCGAGCGTGAGGGCGAGGGGGGGCATGCACTACAAACGGATGGG GGCCCGGAAGGCACAATCGGTGAGGGAGGAGCAGGCCACCCCAAGGTGGG GGAAAGGGAAAGCAGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:2921554..2925769+

>mRNA_S-ischiensis_contig9.20745.1 ID=mRNA_S-ischiensis_contig9.20745.1|Name=mRNA_S-ischiensis_contig9.20745.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2304bp|location=Sequence derived from alignment at S-ischiensis_contig9:2921554..2925769+ (Schizocladia ischiensis KU_0333)
ATGGCGGACGTCAGTTGGCGTGCACGCCCATCGACGGCTGTCTTGTCCGA
GAGATCCCTGCCCATTCGCCGTTTGTACAGTCTGGAAGATGTTACTGGGG
ATATGGAGCAGGCGGACGCTTTCCGTCGGCACAGGACCCAAATACTCGTC
GGAGTCACACTGGTGGCCATCGCCGTCTTTATCATCTTGGACTTCACCGT
CCCGGGCCTCATGAACATCAGCGCGGGGCTCAATGACTTTTTGACATGGG
TTGAGGACCACCCCGGGGCCGATGGCGGACGTCAGTTGGCGTGCACGCCC
ATCGACGGCTGTCTTGTCCGAGAGATCCCTGCCCATTCGCCGTTTGTACA
GTCTGGAAGATGTTACTGGGGATATGGAGCAGGCGGACGCTTTCCGTCGG
CACAGGACCCAAATACTCGTCGGAGTCACACTGGTGGCCATCGCCGTCTT
TATCATCTTGGACTTCACCGTCCCGGGCCTCATGAACATCAGCGCGGGGC
TCAATGACTTTTTGACATGGGTTGAGGACCACCCCGGGGCCGGCGTGCTT
CTCTTTGCGGTGATATTTGCCATCGCTACCATCCTGTTCATCCCGGGGGT
GGTCCTCACCGTGGGGGCTGGCCTGGCCTTTGGGCGAGCCATGGGCATGG
GGCACGGCATTTTGCTGGGGTCTGTGGCGGTCGTTATGGGGGGCATCGCG
GGCTCCATCATGGCCTTCCTCCTCGGGAGGCGTGCTTCTCTTTGCGGTGA
TATTTGCCATCGCTACCATCCTGTTCATCCCGGGGGTGGTCCTCACCGTG
GGGGCTGGCCTGGCCTTTGGGCGAGCCATGGGCATGGGGCACGGCATTTT
GCTGGGGTCTGTGGCGGTCGTTATGGGGGGCATCGCGGGCTCCATCATGG
CCTTCCTCCTCGGGAGGTACATCCTGCAGGAGAAAGCACAGCAGTGGGCC
TCCAAGTTCAAGATCCTGGCCGCCATCAACGCCGCCCTCCGCAAGAAGGG
CGTCCGCTTGATGGTCCTCATCCGCCTCAGCCCCGTGGTCCCGTACGCGG
TCTTCAACTACATTGCCGGCCTCACGCCCGTGACCCTCCGTGACTACACC
ATAGGCTGCCTGGGCATCATACCGGGCACCGTGGCCTTTGTCTTCATCGG
CGCCTCCGCGGCAGGCGCGGCCACGGATGGGGAGGTACATCCTGCAGGAG
AAAGCACAGCAGTGGGCCTCCAAGTTCAAGATCCTGGCCGCCATCAACGC
CGCCCTCCGCAAGAAGGGCGTCCGCTTGATGGTCCTCATCCGCCTCAGCC
CCGTGGTCCCGTACGCGGTCTTCAACTACATTGCCGGCCTCACGCCCGTG
ACCCTCCGTGACTACACCATAGGCTGCCTGGGCATCATACCGGGCACCGT
GGCCTTTGTCTTCATCGGCGCCTCCGCGGCAGGCGCGGCCACGGATGGGG
AGGACATGCTGGACGGCGATGAGGGCACCGACGGCGCATCCGCGGGCGCC
GAGCTCGTCATCCTCATCGTGGGCGTCGCCGCCACCGTCCTCGCCCTGGT
CCTCATCACCTGGTACAGCCGCAAGGCCCTCAAGGAGGCCCTTGTCGACG
CCGAACTGGAGCGAAGCGTGGTGGACGCCGGCGGCCTCGAGCGAACCCCC
CCCTCCTCCACCACCGCCGCCGCTGCCGCTGCCGCCGCCGCCGCCGCCGC
CGACCCCGGGGGTCTGCGAGCGCCCGATCACGACGGTGACGGTGACGGTG
GCGGCAAAAAAAACGCGGGCGAGCGTGAGGGCGAGGGGGGGCATGCACTA
CAAACGGATGGGGGCCCGGAAGGCACAATCGGTGAGGGAGGAGCAGGCCA
CCCCAAGGTGGGGGAAAGGGAAAGCAGCGACATGCTGGACGGCGATGAGG
GCACCGACGGCGCATCCGCGGGCGCCGAGCTCGTCATCCTCATCGTGGGC
GTCGCCGCCACCGTCCTCGCCCTGGTCCTCATCACCTGGTACAGCCGCAA
GGCCCTCAAGGAGGCCCTTGTCGACGCCGAACTGGAGCGAAGCGTGGTGG
ACGCCGGCGGCCTCGAGCGAACCCCCCCCTCCTCCACCACCGCCGCCGCT
GCCGCTGCCGCCGCCGCCGCCGCCGCCGACCCCGGGGGTCTGCGAGCGCC
CGATCACGACGGTGACGGTGACGGTGGCGGCAAAAAAAACGCGGGCGAGC
GTGAGGGCGAGGGGGGGCATGCACTACAAACGGATGGGGGCCCGGAAGGC
ACAATCGGTGAGGGAGGAGCAGGCCACCCCAAGGTGGGGGAAAGGGAAAG
CAGC
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