mRNA_S-ischiensis_contig9.20724.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI) HSP 1 Score: 318 bits (816), Expect = 1.200e-91 Identity = 168/304 (55.26%), Postives = 218/304 (71.71%), Query Frame = 2
Query: 323 GKQRHTRNVDRLTRVAVMLQNSKFNVWYLGLALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVLGDTAVR 1234
G+ + VDRLTR+AVML +SK+NV Y+ ++L+G L ++ RSACYAF LLDVS RYRAMHRVLRAVS+N +LWQTA+LV VV+FI+AAVG A F+DD+AL ++EAV D+ + EG ++GC++L EC++T FQY +R DL L L T +D HR R L+D++YWV+VPLLLLNMV+G+I+DSFAQLRDEEA ++ L+ +C VCGI R EFDR G+ F+DHVT DH MWNY+L RAYL K LE+TGQE++V LQR D DV YFP+G A VL + + R
Sbjct: 4033 GRGKEVGRVDRLTRMAVMLSSSKWNVLYVLVSLVGFVLSLRFEFKGRSACYAFCLLDVSVRYRAMHRVLRAVSQNSAMLWQTAMLVVVVLFIFAAVGTAWFEDDFALASAVEAVGDD--DSAEG------FSGCSTLGECSITLFQYALRGDLGTYLLLMTDQDEPG-HRIRRFLYDVAYWVLVPLLLLNMVSGVILDSFAQLRDEEAALKDELKSRCVVCGISRNEFDRGGNVFYDHVTHDHCMWNYVLVRAYLHFKPELEHTGQESYVHKLQRGGP---DGVPDVRYFPVGEAGVLENASSR 4324
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: A0A6H5L609_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L609_9PHAE) HSP 1 Score: 301 bits (772), Expect = 1.560e-86 Identity = 159/290 (54.83%), Postives = 209/290 (72.07%), Query Frame = 2
Query: 365 VAVMLQNSKFNVWYLGLALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVLGDTAVR 1234
+AVML +SK+NV Y+ ++L+G L ++ RSACYAF LLDVS RYRAMHRVLRAVS+N +LWQTA+LV VV+FI+AAVG A F++D+AL ++EAV D+ + EG ++GC++L EC++T FQY +R DL L L T +D HR R L+D++YWV+VPLLLLNMV+G+I+DSFAQLRDEEA + L+ +C VCGI R EFDR G+ F+DHVT DH MWNY+L RAYL+ K LE+TGQE++V LQR + DV YFP+G A VL + + R
Sbjct: 996 MAVMLSSSKWNVLYVLVSLVGFILSLRFEFKGRSACYAFCLLDVSVRYRAMHRVLRAVSQNSAMLWQTAMLVVVVLFIFAAVGTAWFEEDFALASAVEAVGDD--DSAEG------FSGCSTLGECSITLFQYALRGDLGTYLLLMTDQDEPG-HRVRRFLYDVAYWVLVPLLLLNMVSGVILDSFAQLRDEEAALTDELKSRCVVCGISRNEFDRGGNVFYDHVTHDHCMWNYVLVRAYLNFKPELEHTGQESYVHRLQRGGP---EGVPDVRYFPVGEAGVLENASSR 1273
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: A0A7S1U756_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U756_9STRA) HSP 1 Score: 203 bits (516), Expect = 9.200e-53 Identity = 114/294 (38.78%), Postives = 168/294 (57.14%), Query Frame = 2
Query: 341 RNVDRLTRVAVMLQNSKFNVWYLGLALLGTGFGLAG-AYEK-RSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVL 1216
R R R A+ML +SK+N++YL +++LG L G A+ R+A + F LLDV+FR +A+ RVL AV N + L +TALL V++FIY ++ A F +D+ + + TGC SL+ C +T F Y +R D + P + H R +FD+SY+V+V LLLLNMVAGIIIDSFAQLRD+ R +E +CF+C I G FD+ GF HV +DH+MW Y++ + YL +++ TGQE ++ RH + + + ++ P G A+ L
Sbjct: 573 RREARAWRFAIMLMSSKYNIFYLSISVLGNALALGGPAWSPIRNAIFTFNLLDVAFREKALDRVLGAVLLNRQALLETALLALVIMFIYGSLAYALFAEDFEVNDEPD-------------------TGCESLLGCIVTIFNYGLRLDEGIPSVMERPRNEFTLHNVGRHIFDISYFVVVTLLLLNMVAGIIIDSFAQLRDDTRITRTAMEGRCFICNIESGVFDQHSEGFDTHVARDHNMWAYVMIKKYLFERERTGLTGQELYL-------VRHFEER-NYNFIPNGRALCL 839
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: A0A067CH94_SAPPC (Ion_trans domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CH94_SAPPC) HSP 1 Score: 187 bits (474), Expect = 1.370e-50 Identity = 114/296 (38.51%), Postives = 162/296 (54.73%), Query Frame = 2
Query: 356 LTRVAVMLQNSKFNVWY-----LGLALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVLGDTA 1228
++ +A+++ N+K+N+ Y LG LL + G R CYA LLDV F +R + L AV +N L QT L+ VVV+IY AVG F D Y V DE TGC +L+EC +THF +R D+A V+++ + + S RL FD+SYW+I+ +LLLN++ GIIID+F +LRD + + +E CF+CGI +F R G GF HV DH+MW Y+ R +L +K EYTGQE++V GL + S++P+G A L TA
Sbjct: 87 VSSLALVVYNTKYNLLYCVLGGLGCLLLVPALSVRGL---RIVCYALMLLDVCF-HRTLSNALLAVEQNRNSLVQTFYLICVVVYIYTAVGYMLFHDHYG-------VLDEAN------------TGCRTLMECVITHFNQGLRQDIASVMHIVSWQ-SNPTISVLRLGFDVSYWLIICVLLLNIIGGIIIDAFGELRDHRSSIEKDMESNCFICGIDSLQFQRHGDGFDSHVRHDHNMWQYMFYRQHLYEKTRQEYTGQESYVAGLLMAG--------ETSFYPVGKAKRLRTTA 350
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: T0QW18_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QW18_SAPDV) HSP 1 Score: 189 bits (481), Expect = 1.290e-47 Identity = 114/296 (38.51%), Postives = 163/296 (55.07%), Query Frame = 2
Query: 353 RLTRVAVMLQNSKFNVWY-----LGLALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVLGDT 1225
R++ +A+++ N+K+N+ Y LG LL + G R CYA LLDV F +R + L AV +N L QT L+ VVV+IY AVG F D Y + L+ V TGC +L+EC +THF +R D+A V+++ + + S RL FD+SYW+I+ +LLLN++ GIIID+F +LRD A + +E CF+CGI +F R G GF HV DH+MW Y+ R +L +K P EYTGQE++V L + S++P+G A L T
Sbjct: 2029 RVSSLALVVYNTKYNLLYSILGCLGCVLLVPALSVRGL---RIVCYALMLLDVCF-HRTLSNALLAVEQNRNSLVQTFYLICVVVYIYTAVGYMLFHDQYGV---LDEVN----------------TGCRTLMECVITHFNQGLRQDIASVMHIVSWQ-SNPTISVLRLGFDVSYWLIICVLLLNIIGGIIIDAFGELRDHRASIEKDMESNCFICGIDSLQFQRHGDGFDAHVRHDHNMWQYMFYRQHLYEKRPQEYTGQESYVADLLMAG--------ETSFYPVGKAKRLAAT 2292
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: A0A1V9ZF13_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZF13_9STRA) HSP 1 Score: 189 bits (480), Expect = 1.750e-47 Identity = 111/298 (37.25%), Postives = 166/298 (55.70%), Query Frame = 2
Query: 353 RLTRVAVMLQNSKFNVWY-----LGLALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHR-----FSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVL 1216
R++ +A+++ N+K+N+ Y +G LL + + G R CYA LLDV F +R + L AV +N + L QT LV VVV++Y AVG F + Y V DE TGC +L+EC +THF +R D+A V+++ + WH RL FD+SYW+I+ +LLLN++ GIIID+F +LRD + + +E CF+CGI +F R G GF HV +H+MW Y+ R +L++K P +YTGQE++V L R + +++P+G A VL
Sbjct: 2104 RVSLLALVVYNTKYNLLYCFLGGVGCLLLVPAWSVRGL---RVVCYALMLLDVCF-HRTLSNALLAVEQNRDSLVQTFYLVCVVVYVYTAVGYMLFHEHYG-------VLDEAN------------TGCRTLMECVMTHFNQGLRQDIASVMHIVS------WHNNPTISVLRLGFDVSYWLIICVLLLNIIGGIIIDAFGELRDHRSSIEKDMESNCFICGIDSLQFQRHGRGFDQHVRHEHNMWQYMFYRQHLNEKAPQDYTGQESYVAALLRTG--------ETAFYPVGKARVL 2364
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: A0A1V9ZW02_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZW02_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.670e-43 Identity = 99/265 (37.36%), Postives = 151/265 (56.98%), Query Frame = 2
Query: 353 RLTRVAVMLQNSKFNVWY-----LGLALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFV 1132
R++ +A+++ N+K+N+ Y +G LL + G R CYA LLDV F + + L A+ +N + L QT L+ VVV+IY A+G F + Y V DE TGC +L+EC +THF +R D+A V+++ + + + RLLFD+SYW+++ +LLLN++ GIIID+F+QLRD + + +E CF+CGI EF R GF HV +H+MW Y+ R +L +K +YTGQE++V
Sbjct: 72 RVSSLALVVYNTKYNLLYCLLGFIGCVLLVPSLSIRGL---RIVCYAMMLLDVCF-HPTLSNALLAIEQNRDSLMQTFYLICVVVYIYTAIGYMLFHEHYG-------VLDEAN------------TGCRTLMECVITHFNQGLREDIASVMHIISWQTNPTIS-VLRLLFDVSYWLVICVLLLNIIGGIIIDAFSQLRDHRSSIEKDMESNCFICGIDSLEFQRHSQGFDHHVRHEHNMWQYMFYRQHLYEKSAQDYTGQESYV 312
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: A0A7S2SUM6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM6_9STRA) HSP 1 Score: 148 bits (373), Expect = 6.780e-37 Identity = 92/271 (33.95%), Postives = 138/271 (50.92%), Query Frame = 2
Query: 458 KRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHR--FSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAGHGFHDHVTQDHDMWNYILARAYLDDKD----------------PLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVL 1216
R A Y+ LLD+ FR + RVLRA++ N + L QTALL +V++IY G A F++D+ G+G G+ + C + +CA+T + +R D Y+ + R RLLFD+++WV+V LLL+NMV+GIIIDSFAQLR+++ E L +C +C + G GF H+ +DH++W YI YL +K E+TGQE++ L + + H D +Y P G A+ L
Sbjct: 24 SRMAFYSLFLLDICFRSAILERVLRAINYNRKALQQTALLTIIVIYIYMTFGFALFRNDFF-----------DGDGGVVDGETHTFARCGTFWQCAITFYDNGLREDTGVASYMTDLDLKFLEARPLAFRLLFDITWWVVVTLLLVNMVSGIIIDSFAQLREQDKSVTEELSTRCVMCDCEASLLNTQGDGFRKHIRRDHNLWCYIWVSLYLRNKVRDEEVRIDNRGSAREISTEFTGQESY---LWAKIQNH-----DHTYVPQGRALCL 275
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: D0MSD5_PHYIT (Ryanodine-inositol 1,4,5-triphosphate receptor Ca2 channel (RIR-CaC) family protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MSD5_PHYIT) HSP 1 Score: 154 bits (388), Expect = 1.260e-35 Identity = 94/268 (35.07%), Postives = 147/268 (54.85%), Query Frame = 2
Query: 416 ALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAG-HGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVL 1216
+LL + GAY + +AF LLDV RY+ ++ VLR++S+ + L T LL +VV+++A VG F++DY L + + + EG YT C L +C L +++D YL T H + RL FD+ Y +++ +LLLN++ G+IID+FA LR + E+ ++ +CF+C I FDRA GFHDH+++DH+MW+Y+ ++ K+ EY G E F L R +K D+S+FP A+ L
Sbjct: 2483 SLLQIFVSVLGAYVNK-LYFAFLLLDVVDRYKELNNVLRSISRPAKALGVTTLLYLIVVYVFAVVGFFFFREDYTLEEDISDAQIEG---------RAPYT-CQRLFQCFLVSLDQGLKSDGGLGSYLRQIPLGTSAHSYGRLAFDVLYNILLVVLLLNLIFGVIIDTFASLRTNDQEKILDMQGRCFICSIDAYTFDRATKRGFHDHISRDHNMWHYLYLFVHIRKKNITEYNGLELF---LAMRM-----AKKDMSFFPTHRALSL 2731
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Match: A0A833TJ41_PHYIN (Ion transport protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TJ41_PHYIN) HSP 1 Score: 154 bits (388), Expect = 1.320e-35 Identity = 94/268 (35.07%), Postives = 147/268 (54.85%), Query Frame = 2
Query: 416 ALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRVLRAVSKNGELLWQTALLVAVVVFIYAAVGVASFKDDYALGQSLEAVRDEGGEGVEGSGDPRDYTGCASLVECALTHFQYVIRTDLADVLYLPTPEDSTRWHRFSRLLFDLSYWVIVPLLLLNMVAGIIIDSFAQLRDEEAEQREGLERQCFVCGIHRGEFDRAG-HGFHDHVTQDHDMWNYILARAYLDDKDPLEYTGQETFVDGLQRRSRRHHDSKTDVSYFPMGAAMVL 1216
+LL + GAY + +AF LLDV RY+ ++ VLR++S+ + L T LL +VV+++A VG F++DY L + + + EG YT C L +C L +++D YL T H + RL FD+ Y +++ +LLLN++ G+IID+FA LR + E+ ++ +CF+C I FDRA GFHDH+++DH+MW+Y+ ++ K+ EY G E F L R +K D+S+FP A+ L
Sbjct: 3195 SLLQIFVSVLGAYVNK-LYFAFLLLDVVDRYKELNNVLRSISRPAKALGVTTLLYLIVVYVFAVVGFFFFREDYTLEEDISDAQIEG---------RAPYT-CQRLFQCFLVSLDQGLKSDGGLGSYLRQIPLGTSAHSYGRLAFDVLYNILLVVLLLNLIFGVIIDTFASLRTNDQEKILDMQGRCFICSIDAYTFDRATKRGFHDHISRDHNMWHYLYLFVHIRKKNITEYNGLELF---LAMRM-----AKKDMSFFPTHRALSL 3443 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20724.1 >prot_S-ischiensis_contig9.20724.1 ID=prot_S-ischiensis_contig9.20724.1|Name=mRNA_S-ischiensis_contig9.20724.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=304bp MLQNSKFNVWYLGLALLGTGFGLAGAYEKRSACYAFELLDVSFRYRAMHRback to top mRNA from alignment at S-ischiensis_contig9:2835026..2842922- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20724.1 ID=mRNA_S-ischiensis_contig9.20724.1|Name=mRNA_S-ischiensis_contig9.20724.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=7897bp|location=Sequence derived from alignment at S-ischiensis_contig9:2835026..2842922- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2835026..2842922- >mRNA_S-ischiensis_contig9.20724.1 ID=mRNA_S-ischiensis_contig9.20724.1|Name=mRNA_S-ischiensis_contig9.20724.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1824bp|location=Sequence derived from alignment at S-ischiensis_contig9:2835026..2842922- (Schizocladia ischiensis KU_0333)back to top |