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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 1 |
| Model size | 1107 |
| Cds size | 609 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817373.1157975-UTR-S-ischiensis_contig9:2833784..2834001 | 1622817373.1157975-UTR-S-ischiensis_contig9:2833784..2834001 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2833785..2834001 + |
| 1695741064.1646554-UTR-S-ischiensis_contig9:2833784..2834001 | 1695741064.1646554-UTR-S-ischiensis_contig9:2833784..2834001 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2833785..2834001 + |
| 1622817373.140157-UTR-S-ischiensis_contig9:2834610..2834891 | 1622817373.140157-UTR-S-ischiensis_contig9:2834610..2834891 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2834611..2834891 + |
| 1695741064.1908844-UTR-S-ischiensis_contig9:2834610..2834891 | 1695741064.1908844-UTR-S-ischiensis_contig9:2834610..2834891 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2834611..2834891 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817373.1269689-CDS-S-ischiensis_contig9:2834001..2834610 | 1622817373.1269689-CDS-S-ischiensis_contig9:2834001..2834610 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2834002..2834610 + |
| 1695741064.1783032-CDS-S-ischiensis_contig9:2834001..2834610 | 1695741064.1783032-CDS-S-ischiensis_contig9:2834001..2834610 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2834002..2834610 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20723.1 >prot_S-ischiensis_contig9.20723.1 ID=prot_S-ischiensis_contig9.20723.1|Name=mRNA_S-ischiensis_contig9.20723.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=203bp
MILRHRRASINWGAYACRASGRPRSTAGRLRFLGAIRSVSAGVLRDERPC
PRDPAYHPGPGGRPGHVRTGTRFGENPQIRCKLLPGIVGVLQSHLDLGAP
AGGGDRVSHAVGAATLVILTPVRGAGIVRVFGLQVALLHESSTSAPPRSH
NNLGIARMRVATVRLPSRPEAARLFCLPIRGHPQGTSRICRPQNYGLLIT
QR* back to topmRNA from alignment at S-ischiensis_contig9:2833785..2834891+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20723.1 ID=mRNA_S-ischiensis_contig9.20723.1|Name=mRNA_S-ischiensis_contig9.20723.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1107bp|location=Sequence derived from alignment at S-ischiensis_contig9:2833785..2834891+ (Schizocladia ischiensis KU_0333)
GTTCAAGCCATGTAAGGGTGTGCACTGCAAGGGAAACCGTACGACATGTA
ATTGTGGCCGCCTTTTTCTCTCTCCACCGCCTAATTCATGAGCTACTGCC
ACAGCAAAAAAAGGGCGAAACTACACTGGCCGTTTGCTGTGGCTTCTAGG
AGGTGCTGCGGTCCAACTACCGCAGCACAGCTAAACACCTAGCACGACAT
ATTGAGTTTGTCTGCCCATGATCTTGCGACATCGGAGAGCCTCGATAAAT
TGGGGGGCATACGCGTGCCGGGCCAGCGGGCGCCCAAGGTCAACTGCAGG
ACGCCTACGATTCCTGGGAGCCATTCGCAGCGTATCTGCGGGTGTGCTCC
GAGATGAACGTCCGTGCCCACGTGACCCGGCGTACCATCCCGGGCCTGGT
GGAAGGCCGGGTCACGTGCGCACGGGCACTCGTTTCGGAGAAAACCCGCA
GATCCGCTGCAAACTGCTCCCGGGCATCGTAGGAGTCCTGCAGTCCCATC
TTGACCTTGGGGCGCCCGCTGGCGGTGGCGATCGAGTCAGCCATGCCGTC
GGCGCGGCCACGCTCGTAATCTTGACCCCGGTACGCGGCGCTGGTATAGT
CCGCGTCTTCGGCCTCCAAGTTGCCCTCCTCCACGAAAGTTCGACCTCAG
CACCTCCTAGAAGCCACAACAACTTGGGCATAGCCCGCATGCGCGTTGCA
ACGGTTAGGTTACCCAGTCGGCCAGAAGCTGCAAGGCTTTTCTGTCTGCC
AATCAGAGGCCACCCTCAGGGAACCTCGAGAATCTGCCGTCCCCAAAATT
ACGGCCTATTGATAACTCAGCGCTGATAACTTAATTCCAGCGATGGGAGG
GTCCCGCCATCACATCACACACAATAACGAACATACAAAGTACTTCCGGA
AGTACCACGCATCATCTGTTGTCACGCATTGGGGGACCCGACCCGCCCCC
CCCGTTTGGAGCGCGGAGGGGGGGGGGGGCAAGCGGTAGGGGGGGTCCCC
CAACGCTCACTTTCCAATTTGGGCAAGTACTACGGAGTGCGCTGTGCACG
CAGACTGCACTCGATGACCCCCACACTCGTACATGCGTGCAAACCGCGGG
CCTCGTG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:2833785..2834891+ >mRNA_S-ischiensis_contig9.20723.1 ID=mRNA_S-ischiensis_contig9.20723.1|Name=mRNA_S-ischiensis_contig9.20723.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1218bp|location=Sequence derived from alignment at S-ischiensis_contig9:2833785..2834891+ (Schizocladia ischiensis KU_0333)
ATGATCTTGCGACATCGGAGAGCCTCGATAAATTGGGGGGCATACGCGTG
CCGGGCCAGCGGGCGCCCAAGGTCAACTGCAGGACGCCTACGATTCCTGG
GAGCCATTCGCAGCGTATCTGCGGGTGTGCTCCGAGATGAACGTCCGTGC
CCACGTGACCCGGCGTACCATCCCGGGCCTGGTGGAAGGCCGGGTCACGT
GCGCACGGGCACTCGTTTCGGAGAAAACCCGCAGATCCGCTGCAAACTGC
TCCCGGGCATCGTAGGAGTCCTGCAGTCCCATCTTGACCTTGGGGCGCCC
GCTGGCGGTGGCGATCGAGTCAGCCATGCCGTCGGCGCGGCCACGCTCGT
AATCTTGACCCCGGTACGCGGCGCTGGTATAGTCCGCGTCTTCGGCCTCC
AAGTTGCCCTCCTCCACGAAAGTTCGACCTCAGCACCTCCTAGAAGCCAC
AACAACTTGGGCATAGCCCGCATGCGCGTTGCAACGGTTAGGTTACCCAG
TCGGCCAGAAGCTGCAAGGCTTTTCTGTCTGCCAATCAGAGGCCACCCTC
AGGGAACCTCGAGAATCTGCCGTCCCCAAAATTACGGCCTATTGATAACT
CAGCGCTGAATGATCTTGCGACATCGGAGAGCCTCGATAAATTGGGGGGC
ATACGCGTGCCGGGCCAGCGGGCGCCCAAGGTCAACTGCAGGACGCCTAC
GATTCCTGGGAGCCATTCGCAGCGTATCTGCGGGTGTGCTCCGAGATGAA
CGTCCGTGCCCACGTGACCCGGCGTACCATCCCGGGCCTGGTGGAAGGCC
GGGTCACGTGCGCACGGGCACTCGTTTCGGAGAAAACCCGCAGATCCGCT
GCAAACTGCTCCCGGGCATCGTAGGAGTCCTGCAGTCCCATCTTGACCTT
GGGGCGCCCGCTGGCGGTGGCGATCGAGTCAGCCATGCCGTCGGCGCGGC
CACGCTCGTAATCTTGACCCCGGTACGCGGCGCTGGTATAGTCCGCGTCT
TCGGCCTCCAAGTTGCCCTCCTCCACGAAAGTTCGACCTCAGCACCTCCT
AGAAGCCACAACAACTTGGGCATAGCCCGCATGCGCGTTGCAACGGTTAG
GTTACCCAGTCGGCCAGAAGCTGCAAGGCTTTTCTGTCTGCCAATCAGAG
GCCACCCTCAGGGAACCTCGAGAATCTGCCGTCCCCAAAATTACGGCCTA
TTGATAACTCAGCGCTGA back to top
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