mRNA_S-ischiensis_contig9.20715.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A835YTW3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW3_9STRA) HSP 1 Score: 286 bits (733), Expect = 1.010e-82 Identity = 165/339 (48.67%), Postives = 212/339 (62.54%), Query Frame = 2
Query: 2 GELCFAVMGSGSSSDGSRMECLASGEPIDQVATALEAAGR-----------QEVVVHRKCCQMVADVALGDVLPEGHLRVNALTEW----------RSAAWLAGVDPLKPSSAAGRLLRDMTSP----------GARAPIDSRQISALQRFAPTPVNENMTAGG--FDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAM-----VGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVLSFKPLPVM 904
G++CFAV+G+ S SR ECL SG+PI QVA ALE A R E+V+HR C Q+ A G L G+ RV AL + A WL+ + G D S G RA I++ QIS L+RF P PV +MTAG FDY+AE+R+VTT+F++WD YS E HRDL++ EP++ V+ VL+ H+GFLRQFLVDDKGCV+IACWGVPSA++ D+C+RA+EAAV A+ +L L M S+GITTGRALCC IGS+LRCEYAM VGDVINLAARLM +A G +LCD T+ + R+ +++ PLP M
Sbjct: 449 GDICFAVLGTKDMS--SRWECLISGDPIQQVAEALEQARRGVXXXXXXXXXXEIVLHRTCWQLTAPWLKGHELATGNFRVTALLPGAPMPGPGMGSKGAYWLSVTPGAGHPNYGGGYANDGYSRSIWQAARPGRGPRAQINAGQISCLKRFVPAPVLNSMTAGTGTFDYLAEIRQVTTLFMKWDNYSPEDHRDLLSLEPYFAAVQTVLQAHEGFLRQFLVDDKGCVLIACWGVPSATYPDNCERALEAAVRAHQQLGLLQMGTSIGITTGRALCCNIGSELRCEYAMATLPQVGDVINLAARLMGEARGRVLCDSATQDNLHDRLRISRIMALHPLPEM 785
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: D7FJ46_ECTSI (Guanylyl cyclase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ46_ECTSI) HSP 1 Score: 213 bits (542), Expect = 2.860e-57 Identity = 118/243 (48.56%), Postives = 155/243 (63.79%), Query Frame = 2
Query: 230 SAAWLAGVDPLKPSSAAGRLLRD--MTSPGA----RAPIDSRQISALQRFAPTPVNENMTAGGFDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVLSFKPLPVMHVKGKHAEVWPF 940
+AAW++ + A ++L D + + GA R + S + LQ F P PV + + AG F YMAE+R VTT+F++ D YS E H++L++ + T ++K+L +H+GFLRQFLVDDKGCV+IACWGVP S+ D+ R + AAV +A LQ M+ SMGITTG ALC +G K+R EYAMVGDVINLAARLM KA G I+CDE T H L V FK L M +KGK + PF
Sbjct: 421 NAAWVSSNAKARERKAGSKILGDDSVHALGAAGKMRVEVSSAVLPVLQGFVPGPVTDLLAAGIFMYMAEMRTVTTLFVKLDSYSPEKHKNLLSLQIHLTTIQKILAEHEGFLRQFLVDDKGCVLIACWGVPGRSYPDNGNRCLAAAVEIHASLQVRDMKTSMGITTGHALCGRMGGKIRSEYAMVGDVINLAARLMGKAKGRIVCDEVT--HDLVCCNETMVALFKRLDPMMLKGKEHPIAPF 661
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A835YMU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMU2_9STRA) HSP 1 Score: 201 bits (510), Expect = 5.980e-54 Identity = 142/386 (36.79%), Postives = 189/386 (48.96%), Query Frame = 2
Query: 2 GELCFAVMGSGSSSDGSRMECLASGEPIDQVATALEAAGRQE----------------------VVVHRKCCQMVADVALGDVLPEGHL---RVNALTEW-----RSAAWLAGVDPLKPSSAAG-------------------------RLLRDMTSPGARAPIDSRQISALQRFAPTPVNENMTAGGFDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSA------SHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLK------------ARRLQGVLSFKPLPVMHVKGKHAEVWPF 940
GELCF V+G ECL SGE I VA ALE A R + VV+ + +++ G LP G+L V A+ E +W +D + +G +LLR PG + ++ F P PV E + +G FDYMAELR VTT+F++ D Y + HRDL++ + F + +L + +GFLRQFLVDDKGCV+IACWGVP +H D+C RA+ AAV + +L A M+ S+G+TTGRALC +G KLR EYA+VGDVINLAAR MSKA G ILCD+ T + R Q F+ L M +KGK + P+
Sbjct: 277 GELCFGVLGGVED----YWECLISGETIALVAAALEEAQRGQKWCAGLXXXXXXXXXXEAQQGQVVLSVETFKLLGVDVHGTFLPSGNLLLETVKAVAEQPPQHIERVSWGGNMDLSFLNGGSGGSMXXXXXXXXXXXXXXXXXXXXXXKLLRAAVPPGL--------VPMMKGFVPLPVTELVCSGIFDYMAELRTVTTVFMKLDSYDAQEHRDLLSLQGFLATAQGILSEKEGFLRQFLVDDKGCVLIACWGVPGRKAVPGRNHSDNCARAMAAAVELHKQLGAQRMKTSLGVTTGRALCGRVGGKLRSEYAVVGDVINLAARFMSKAKGRILCDDATYTXXXXXXXXXXXXXXXVGRDGQEAAYFRQLSPMALKGKSVPISPW 650
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A482S5B6_9ARCH (Guanylate cyclase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5B6_9ARCH) HSP 1 Score: 186 bits (472), Expect = 5.040e-48 Identity = 120/326 (36.81%), Postives = 180/326 (55.21%), Query Frame = 2
Query: 2 GELCFAVMGSGSSSDGSRMECLASGEPIDQVATALEAAGRQEVVVHRKCCQMVADVALGDVLPEGHLRVNALTEWRSAAWLAGVDPLKPSSAAGRLLRDMTSPGARAPIDSRQISA-------LQRFAPTPVNENMTAGGFDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVL--SFKPLPVMHVKGKHAEVWPFQVRA 952
GELC ++G S + ECL SG + +++ L+ +EV V ++V AL D G L+++ S +L P+ RLL D S A +D +S+ + F P PV+ +GG Y+AE+REVT MF++WD Y EG+RD++ + ++ ++ + GF+RQFLVDDKGCV+IACWGV +AS++++ RA+ +AV ++ +R S+GITTG C ++GS++R EYA +GD +NL+ARLMSK G I DE+T S RL V+ F L MH+KGK + + A
Sbjct: 116 GELCLGIVGGHSD----KFECLISGSCLMEMSQCLDDTKSKEVAVSASFAKLVGAHALLDF---GGLKLS------SGNYLLRF---MPTLNLPRLLAD-NSEEEEAVVDYVIMSSKPEYMRLVNMFVPLPVSLAFESGGLRYLAEIREVTAMFMKWDSYDLEGNRDIITLHSPFLQIQAIVAEQGGFIRQFLVDDKGCVLIACWGVHTASYLNNATRALASAVNIRDLFESKSLRCSIGITTGNVYCGIVGSEIRREYAAIGDTVNLSARLMSKTKGGIFIDESTHS------RLPLVIWKRFIFLDPMHIKGKSLPIKAYSFEA 418
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A482SJH3_9ARCH (Guanylate cyclase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJH3_9ARCH) HSP 1 Score: 180 bits (457), Expect = 4.880e-46 Identity = 111/319 (34.80%), Postives = 174/319 (54.55%), Query Frame = 2
Query: 2 GELCFAVMGSGSSSDGSRMECLASGEPIDQVATALEAAGRQEVVVHRKCCQMVADVALGDVLPE-GHLRVNALTEWRSAAWLAGVDPLKPSSAAGR-LLRDMTSPGARAPIDSRQISALQRFAPTPVNENMTAGGFDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVLSFKPLPVMHVKGKHAEVWPFQVRA 952
GE+CF ++G S + ECL SG + +++ L+ +EV ADV DVL + G L++ + + PL+ SA + D ++ + + F P PV+ +GG Y+AE+REVTTMF++W+ Y+ E +RD++ + + ++ ++ Q GF+RQFL+DDKGCV+IACWGV +AS++++ RA+ +AV+ Q+ + S+GITTG C +G+++R EYA +GD +NL+ARLMS A G IL D +T SH + F L M VKGK + + A
Sbjct: 166 GEMCFGIVGGHSD----KFECLISGPCLMELSQCLDDTKSKEVASSAS----FADVVGTDVLTDFGGLKMASGNYLLRCMPSHNLPPLQAESAEEEEAVVDYVIMSSKP----EYVRLVNMFVPLPVSLAFESGGLKYLAEIREVTTMFMKWESYNVESNRDIITLQTPFVQIQAIIAQQGGFIRQFLIDDKGCVLIACWGVHTASYLNNATRALASAVLIRDLFQSKTLLCSIGITTGNVYCGNVGNEIRREYAAIGDTVNLSARLMSSAKGGILIDYSTHSHLA----VDVWKRFTALDPMQVKGKTLPIQAYSFEA 468
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A482S5B1_9ARCH (Adenylate/guanylate cyclase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5B1_9ARCH) HSP 1 Score: 176 bits (445), Expect = 3.130e-45 Identity = 93/187 (49.73%), Postives = 122/187 (65.24%), Query Frame = 2
Query: 359 FAPTPVNENMTAGGFDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVLSFKPLPVMHVKGK 919
F P PV +GG Y+AE+REVTTMF++WD Y HR+LV+ + + V+ +L + GFLRQFLVDDKGCV+IACWGVP+AS ++ RA+ AA + ++ M S+GITTG C +GS++R EYA +GDV+NL+ARLMSKA G I DE T S L R + F+ L M VKGK
Sbjct: 33 FIPLPVTLAFESGGLRYLAEIREVTTMFMKWDCYDPYTHRNLVSLQSAFFSVQSILDEAGGFLRQFLVDDKGCVLIACWGVPTASFTNNAHRALSAATKIHHHFLSINMSCSIGITTGNVYCGNVGSEMRREYAAIGDVVNLSARLMSKAKGGIYVDEATYSR-LSVRMWE---MFEELEPMMVKGK 215
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A7S3MCE9_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MCE9_9STRA) HSP 1 Score: 177 bits (450), Expect = 3.910e-45 Identity = 112/321 (34.89%), Postives = 176/321 (54.83%), Query Frame = 2
Query: 53 RMECLASGEPIDQVATALEAAGRQEVVVHRKCCQMVADVALGDVLPEGHLR------VNALTEWRSAAWLAGVDPLKP----------SSAAGRLLRDMTSPGARAPIDSRQ-ISALQRFAPTPVNENM-TAGGFDYMAELREVTTMFLRWDGY-SQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVL--SFKPLPVMHVKGKHAEVWPFQVRA 952
R ECL SG I Q++ L+ A + V+ C +++ ++ + P ++ + +L + ++ + PL+ +S L + A+ +++ + +Q+F P P+ E + +A + MAE+REVTTMF++WD Y S E +R+L+ +P + +++L++ +LRQFLVDDKGCV+IACWG+P S++D+ R + AAV L LGM+ S GITTG C +GS LR EYA +G V+N++ARLM KA G IL DE T + RL + + K L + VKG+ P QV A
Sbjct: 4 RWECLISGPCIHQLSGCLDDAPSKHAVMSAGCVEVLVAASVANAEPFTEVKTGKSTLLTSLIRTNAGMYVFEILPLESGNYRIVDVQCASTMDALSTAINKASAKIKTNAQSHVKLIQQFVPVPIAEELESAKELNLMAEIREVTTMFMKWDSYDSTESNRNLITLQPCFFEAQRILQETGAYLRQFLVDDKGCVLIACWGMPHLSYLDNAHRGLSAAVQIRQELYKLGMKCSFGITTGDVYCGTVGSALRMEYAAIGSVVNMSARLMCKANGGILIDEATFT------RLPSTVHDTLKHLDPIKVKGRDE---PLQVYA 315
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A7V8VU60_9BACT (AAA family ATPase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V8VU60_9BACT) HSP 1 Score: 162 bits (410), Expect = 7.430e-40 Identity = 105/293 (35.84%), Postives = 149/293 (50.85%), Query Frame = 2
Query: 65 LASGEPIDQVATALEAAGRQEVVVHRKCCQMVADVALGDVLPEGHLRVNALTEWRSAAWLAGVDPLKPSSAAGRLLRDMTSPGARAPIDSRQISALQRFAPTPVNENMTAGGFDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVLSFKPLPVMHVKGKHAEVWPFQ 943
+ +GEP++Q+ A EVV+ + + V +V +G+ PE R NA+T PL P+ R +T A + SR + A F P PV + AG +++AELR+VT +F+ G L + + ++++H G L +VDDKGCV+I +GVP H DD R V AA+ LQ G R ++G+ TGRA C IGS LR EY ++G+ +NLAARLM A ILCD T R G +F+PLP + VKGK V F+
Sbjct: 167 VVAGEPLEQIGVAQRHVAAGEVVLSSEAWEQVREVCVGEARPEHCWRANAVT---------APLPLTPA-------RSVTP----AALPSRVLEA---FLPDPVRSRLAAGQAEWLAELRQVTALFVNLLELDHAGEGALEVMQRVMEVSQPLVQRHQGALADVIVDDKGCVLIVVFGVPPFVHEDDAVRGVRAAMALQTALQEAGHRTAIGLATGRAFCGAIGSDLRREYTVLGEAVNLAARLMQAAPDGILCDSATE------RLAAGRFAFEPLPALTVKGKAEPVSVFR 430
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A482T2J0_9ARCH (Guanylate cyclase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2J0_9ARCH) HSP 1 Score: 162 bits (409), Expect = 1.070e-39 Identity = 122/364 (33.52%), Postives = 182/364 (50.00%), Query Frame = 2
Query: 2 GELCFAVMGSGSSSDGSRMECLASGEPIDQVATALEAAGRQEVVVHRK--CCQMVADVALGDVLPEGHLRVNALTEWR--------SAAWLAGVDPLKPSSAAGR----LLRDMTSPGARAPIDSRQI--SALQRFAPTPVNENMTAGGFDY--MAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVLSFKPLPVMHVKGKHAEVWPFQVRAGPGGRPSSGRFYRPALGRST-SDGRVMQP 1036
GE+CF V+G + +CL SG + ++ L+ A ++VV+ + C V D + R+ L SAA + P S + + LL A + S I + L++F P PVN+++TA D +AELREV T+F++W Y E H +L++ + + ++++ + GF+RQFLVDDKGCV+IA WGVPSASH+D+ RAV A +A S+GITTG+ +GS LR EYA +GD +N+AARLM KA I T ++ L + + + + +KGK AE P +V S R GRST S+ R ++P
Sbjct: 292 GEVCFGVLGGYDD----KWDCLVSGPCLMDLSQCLDDAKSKQVVITPELHCMMKVTD--------KEQFRIEELESCNFLIQDTDTSAAPIIPAIPTGASPSTNKKRSFLLPGQDQNAANQYLLSSPIFNALLRKFVPLPVNQHLTAQTQDLSQLAELREVCTLFMKWQSYDYEKHTNLLSLQELFYGAQEIIHKWGGFIRQFLVDDKGCVLIALWGVPSASHIDNSVRAVSCAAQLGNIFRAKDFEISIGITTGKVFTGTVGSVLRKEYAAIGDSVNMAARLMCKANNEIFLGSVTANNLLASNKSLYNSLLRSMGKFKMKGK-AE--PLEVFCFTAINTESNASQRNTKGRSTTSNWRYIRP 640
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Match: A0A482T2S1_9ARCH (Adenylate/guanylate cyclase domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2S1_9ARCH) HSP 1 Score: 154 bits (388), Expect = 5.030e-37 Identity = 87/204 (42.65%), Postives = 117/204 (57.35%), Query Frame = 2
Query: 329 DSRQISALQRFAPTPVNENMTAGGFDYMAELREVTTMFLRWDGYSQEGHRDLVAAEPFYTCVRKVLRQHDGFLRQFLVDDKGCVMIACWGVPSASHVDDCQRAVEAAVVAYARLQALGMRASMGITTGRALCCLIGSKLRCEYAMVGDVINLAARLMSKAGGTILCDETTRSHTLKARRLQGVLSFKPLPVMHVKGKHAEVWPF 940
D + AL F P P+ + G ++ELR VTT+F+ D Y H D V+ +P + ++VL + GFLRQFLVDDKGCV IA WGVPS ++ ++ RA+ A + RL LG R S+GITTG C IG+ RC+YA +G +NLAAR M+KA G I DE T + A + V +PL +KG A + PF
Sbjct: 229 DRLLVDALVLFLPLPITLALHTEGNHMISELRHVTTLFMSLDSYDPAVHSDPVSLQPMFLAAQQVLAESGGFLRQFLVDDKGCVFIAMWGVPSYTYSNNSSRALYFAAASSMRLTELGHRCSIGITTGTVFCGTIGAIERCDYAGIGTEVNLAARFMAKAKGKIFLDENTYDNLNVANKELLVQVAEPL---QLKGMPAPIQPF 429 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20715.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20715.1 >prot_S-ischiensis_contig9.20715.1 ID=prot_S-ischiensis_contig9.20715.1|Name=mRNA_S-ischiensis_contig9.20715.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=405bp MGSGSSSDGSRMECLASGEPIDQVATALEAAGRQEVVVHRKCCQMVADVAback to top mRNA from alignment at S-ischiensis_contig9:2771604..2776512- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20715.1 ID=mRNA_S-ischiensis_contig9.20715.1|Name=mRNA_S-ischiensis_contig9.20715.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4909bp|location=Sequence derived from alignment at S-ischiensis_contig9:2771604..2776512- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2771604..2776512- >mRNA_S-ischiensis_contig9.20715.1 ID=mRNA_S-ischiensis_contig9.20715.1|Name=mRNA_S-ischiensis_contig9.20715.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2430bp|location=Sequence derived from alignment at S-ischiensis_contig9:2771604..2776512- (Schizocladia ischiensis KU_0333)back to top |