mRNA_S-ischiensis_contig9.20711.1 (mRNA) Schizocladia ischiensis KU_0333
|
Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: A0A7S3UWA5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA5_HETAK) HSP 1 Score: 177 bits (448), Expect = 1.090e-51 Identity = 85/131 (64.89%), Postives = 103/131 (78.63%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIGD+D + ++KVIID +VM+ACP L+YIGV ATGYN VDLE A RGIAVTNVPAYS+DSVAQ +FAY+LHDAV + EHL V G+WQK+PDFC+F + M E+AG+ LVL+G G IG AV I AF M
Sbjct: 106 RIGDSDAVFSSKVIIDDDVMEACPNLKYIGVLATGYNNVDLEAATARGIAVTNVPAYSSDSVAQTVFAYLLHDAVGVHEHLRAVEAGEWQKSPDFCFFAAPMNELAGQNLVLVGSGGIGGAVGRIGPAFGM 236
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: H7EMB9_9SPIR (D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Treponema saccharophilum DSM 2985 TaxID=907348 RepID=H7EMB9_9SPIR) HSP 1 Score: 155 bits (391), Expect = 5.890e-44 Identity = 78/131 (59.54%), Postives = 92/131 (70.23%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIG+AD IL NKV I E++ ACP LRYIGV ATGYNVVD+ + GI VTN+P+YSTD+VAQ IFA ILH A +GEH V G W K PDFCY+VS + E++GK L + G G IG VA IA AF M
Sbjct: 42 RIGNADAILLNKVRITKEILSACPNLRYIGVLATGYNVVDVASCAEAGIVVTNIPSYSTDAVAQHIFALILHFASRVGEHSDSVARGDWIKCPDFCYWVSPLSEISGKTLGIFGFGNIGRKVAQIAHAFGM 172
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: A0A835YMI0_9STRA (D-isomer specific 2-hydroxyacid dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMI0_9STRA) HSP 1 Score: 155 bits (393), Expect = 6.180e-44 Identity = 81/131 (61.83%), Postives = 97/131 (74.05%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIGDA +LT+KV+ID VMDAC L+Y+GVTATGYN+VDL+ ARKRGIAVT+VP YST SVAQM+ AY+ HDA ++ RD W A DFC M E+AGKRL L+G+GAIG AVA IA AF+M
Sbjct: 73 RIGDAQAVLTSKVVIDEPVMDACKQLQYVGVTATGYNMVDLDAARKRGIAVTHVPVYSTASVAQMVAAYLTHDASAVSALAATARD-HWPHALDFCSLSHPMTELAGKRLALVGRGAIGAAVARIAEAFEM 202
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: UPI001C10F518 (D-2-hydroxyacid dehydrogenase n=1 Tax=Pseudoflavonifractor sp. MSJ-37 TaxID=2841531 RepID=UPI001C10F518) HSP 1 Score: 154 bits (389), Expect = 1.170e-43 Identity = 74/131 (56.49%), Postives = 95/131 (72.52%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIG A+L+LTNK ++D V +ACPG+RY+GVTATGYNVVDL A++ G+ VTNVPAYST++VAQ +FA +L +G H VR GKWQ APDFCY+ + M E+ GK ++G G IG+A A A AF M
Sbjct: 41 RIGTAELVLTNKTVLDRAVFEACPGIRYVGVTATGYNVVDLAAAKEHGVVVTNVPAYSTEAVAQHVFALLLELTDHVGLHSDSVRAGKWQSAPDFCYWEAPMMELFGKTFGIVGYGRIGQAAARRAEAFGM 171
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: I0X6K2_9SPIR (Lactate dehydrogenase n=1 Tax=Treponema sp. JC4 TaxID=1124982 RepID=I0X6K2_9SPIR) HSP 1 Score: 153 bits (387), Expect = 2.180e-43 Identity = 73/131 (55.73%), Postives = 95/131 (72.52%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIGD+D I NK+ I +++ ACP L+YIGV ATGYNVVDL+ RKRGI VTN+PAYSTDSVAQ +FA+ILH + H V++G W+ PDFCY+ + + E+AGK L + G G IG+ V+ IA+AF M
Sbjct: 41 RIGDSDAIFLNKINITEDILSACPNLKYIGVLATGYNVVDLDACRKRGITVTNIPAYSTDSVAQHVFAFILHFTNHVALHNASVQNGDWKACPDFCYWNAPLAELAGKTLGIFGYGNIGKKVSQIAKAFGM 171
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: A0A3B8WN78_9SPIR (Glycerate dehydrogenase (Fragment) n=1 Tax=Treponema sp. TaxID=166 RepID=A0A3B8WN78_9SPIR) HSP 1 Score: 151 bits (382), Expect = 4.340e-43 Identity = 71/131 (54.20%), Postives = 95/131 (72.52%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIGD+D I NK+ I +++D+CP L+YIGV ATGYNVVDL E K+ I VTN+PAYSTDSVAQ +FA+IL+ + + H V++G W ++PDFCY+ S + E+ GK L + G G+IG+ VA IA AF M
Sbjct: 41 RIGDSDAIFLNKIQITKQILDSCPKLKYIGVLATGYNVVDLAECTKKNITVTNIPAYSTDSVAQHVFAFILNYSNQVASHAASVKNGDWTRSPDFCYWNSSLTELTGKTLGIFGFGSIGQKVAKIAHAFGM 171
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: A0A7V2YW61_9BACT (D-2-hydroxyacid dehydrogenase n=1 Tax=bacterium TaxID=1869227 RepID=A0A7V2YW61_9BACT) HSP 1 Score: 151 bits (382), Expect = 1.340e-42 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
R GDA+++LTNKV+ D ++A P LRYIGVTATGYN++DL AR+RG+ VTNVPAYST SV Q +FA + G H G R GKW +APDFC++ ++EVAGK + L+G G IG+ VA A+AF+M
Sbjct: 45 RAGDAEIVLTNKVVFDRAAIEALPRLRYIGVTATGYNIIDLSAARERGVVVTNVPAYSTPSVVQAVFALLFELTNHTGLHDGAARSGKWSQAPDFCFWERPIQEVAGKTIGLVGLGHIGQGVARAAQAFEM 175
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: A0A7V1PTW3_9BACT (D-2-hydroxyacid dehydrogenase n=1 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V1PTW3_9BACT) HSP 1 Score: 150 bits (380), Expect = 2.610e-42 Identity = 73/131 (55.73%), Postives = 95/131 (72.52%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
R+GD LILTNK+IID VMD P LRYIGV ATGYN +D+ A +RGI V NVPAYST SVAQM+FAYILH + + H V++G W ++P+FC++ + E+ G+ L ++G GAIG+ VA +ARAF M
Sbjct: 41 RLGDVPLILTNKIIIDAGVMDKLPALRYIGVLATGYNNIDIAAAGERGIVVCNVPAYSTSSVAQMVFAYILHFSQQVALHSKAVKEGGWARSPEFCFWEKPLAELKGQSLGIVGYGAIGKQVARLARAFDM 171
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: UPI00137A22F1 (D-2-hydroxyacid dehydrogenase n=1 Tax=Enterococcus sp. CU9D TaxID=1857218 RepID=UPI00137A22F1) HSP 1 Score: 150 bits (380), Expect = 2.810e-42 Identity = 74/131 (56.49%), Postives = 92/131 (70.23%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIG +D+IL NKV I +++ ACP L+YIGV ATGYNVVDLE R GI VTN+PAY TD+VAQ FA +L +G H V G WQK+PDF Y++ + E+ GK L L+G GAI +AVA+IA AFKM
Sbjct: 44 RIGSSDVILLNKVPITKKIVAACPNLKYIGVLATGYNVVDLEACRSAGITVTNIPAYGTDAVAQFTFALLLEICSQVGRHNASVHKGDWQKSPDFTYWLQPLTELKGKTLGLIGYGAIAQAVAEIAHAFKM 174
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Match: R5FW29_9FIRM (Glycerate dehydrogenase n=2 Tax=Eubacteriales TaxID=186802 RepID=R5FW29_9FIRM) HSP 1 Score: 150 bits (378), Expect = 4.610e-42 Identity = 71/131 (54.20%), Postives = 97/131 (74.05%), Query Frame = 2
Query: 2 RIGDADLILTNKVIIDGEVMDACPGLRYIGVTATGYNVVDLEEARKRGIAVTNVPAYSTDSVAQMIFAYILHDAVSLGEHLGGVRDGKWQKAPDFCYFVSHMEEVAGKRLVLLGKGAIGEAVADIARAFKM 394
RIGDA+++ TNK +I EV+D C L+ I V ATGYNV+D++ AR++G+AV NVPAYSTDSVAQ+ FA+IL A +GEH V G+W + DFC++ + E+AGK L ++G G IG+ VA+IA+AFKM
Sbjct: 41 RIGDAEVVFTNKTVIGKEVLDKCKNLKLISVFATGYNVIDVDYAREKGVAVCNVPAYSTDSVAQLTFAFILEIANRVGEHNDAVHGGRWLSSEDFCFWTRPLTELAGKTLGIVGYGNIGKRVAEIAKAFKM 171 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20711.1 >prot_S-ischiensis_contig9.20711.1 ID=prot_S-ischiensis_contig9.20711.1|Name=mRNA_S-ischiensis_contig9.20711.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=132bp ADRGCRPDSDQQGDHRWRGHGRLSRAPVHRGDRHRLQRGGPGGGEEERHRback to top mRNA from alignment at S-ischiensis_contig9:2746679..2749166- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20711.1 ID=mRNA_S-ischiensis_contig9.20711.1|Name=mRNA_S-ischiensis_contig9.20711.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2488bp|location=Sequence derived from alignment at S-ischiensis_contig9:2746679..2749166- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2746679..2749166- >mRNA_S-ischiensis_contig9.20711.1 ID=mRNA_S-ischiensis_contig9.20711.1|Name=mRNA_S-ischiensis_contig9.20711.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=792bp|location=Sequence derived from alignment at S-ischiensis_contig9:2746679..2749166- (Schizocladia ischiensis KU_0333)back to top |