mRNA_S-ischiensis_contig9.20694.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: D7FT24_ECTSI (Similar to ataxia telangiectasia and Rad3 related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT24_ECTSI) HSP 1 Score: 186 bits (471), Expect = 2.000e-51 Identity = 95/155 (61.29%), Postives = 121/155 (78.06%), Query Frame = 2
Query: 14 VQELQQQSTQLVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSLP 478
V +LQ ST LV++AV TIPPYMWYT LPQLTSRVGHPNE++LRVI++AL LL+AHPKQALWHLSSL LS++ RR+VG+ +F AR+ L EG++ +A +Q+G LF ELI++AE P +EA + IG R+DL+RFIVPV+A LTVSLP
Sbjct: 1626 VPKLQTDSTALVKEAVRTIPPYMWYTALPQLTSRVGHPNEDVLRVIIDALAMLLRAHPKQALWHLSSLCLSISETRRQVGNRVFEQARRLLDAEGKQGEAVAIQDGQALFSELITVAEEQ-PPKNLKEAHFKIGHRMDLHRFIVPVQAALTVSLP 1779
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: A0A6H5KWD2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWD2_9PHAE) HSP 1 Score: 179 bits (453), Expect = 3.870e-49 Identity = 93/155 (60.00%), Postives = 121/155 (78.06%), Query Frame = 2
Query: 14 VQELQQQSTQLVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSLP 478
V +LQ ST LV++AV TIPPYMWYT LPQLTSRVGHPNE++LRVI++AL LL+AHPKQALWHLSSL LS++ +RR+VG+++F AR+ L EG++ +A +Q+G LF ELI++A+ P +EA + IG R+DL+RFIVP A LTVSLP
Sbjct: 422 VPKLQTDSTALVKEAVRTIPPYMWYTALPQLTSRVGHPNEDVLRVIIDALAMLLRAHPKQALWHLSSLCLSISESRRQVGNQVFEQARRLLDAEGKQGEAVAIQDGQALFSELITVAQEQ-PPKNLKEAHFKIGHRMDLHRFIVP--AALTVSLP 573
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: A0A835Z967_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z967_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.810e-43 Identity = 83/151 (54.97%), Postives = 108/151 (71.52%), Query Frame = 2
Query: 14 VQELQQQSTQLVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLT 466
+Q L+ ++TQLV AV +P YMWYT LPQL SRVGHPN E+ V+V+AL LL +HP QALWH+S L LSLN AR+ VG+ + A A + LL+E R DA V++ LF++LI LA+ PT R+RE T+ IGRR+ L RF+VPV+A LT
Sbjct: 53 LQLLRARATQLVADAVRGVPAYMWYTCLPQLLSRVGHPNAEVQAVVVQALAHLLASHPHQALWHVSGLQLSLNKARKAVGERVVAKAYQTLLQEARAADAQCVRDAKALFDDLIDLAQHQPPTERTRETTFNIGRRIRLERFVVPVQAALT 203
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: F0Y268_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y268_AURAN) HSP 1 Score: 107 bits (266), Expect = 5.460e-24 Identity = 61/160 (38.12%), Postives = 99/160 (61.88%), Query Frame = 2
Query: 14 VQELQQQSTQLVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLE-EGREQDAATVQE----GTRLFEELISLAEATLPTSRSREATYAIGRRLDLNR-FIVPVKAGLTVSL 475
++ L+Q+ +VR+A ++IP +WYTV PQL SR HPN ++R + E L +L AHP +A+W ++ L SLN R++VG E+F+LA KRL + + +DAA Q+ +LF +LI++A+ P S + IG+++ R +VP +A LT ++
Sbjct: 56 LERLKQEIYDVVRRASLSIPAAVWYTVTPQLVSRAAHPNPSLMRGVSELLAIILHAHPDEAVWAVTGLTQSLNPDRKKVGSELFSLAAKRLQKSDAHARDAAKTQKMLHGAKQLFADLIAVAKHVPPDSAATVDMRRIGKQVKAARGLLVPTRAALTAAI 215
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: A0A4D9CU95_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU95_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.690e-22 Identity = 61/163 (37.42%), Postives = 92/163 (56.44%), Query Frame = 2
Query: 20 ELQQQSTQLVRKAVITIPPYMWYTVLPQLTSRVGHPN----------EEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSLP 478
+L Q + + R+A + WYT LPQL S+VG EI +I+EA+ ++L+ HP+QA+W + L+ S ++ RRR G+ I A R+L+ G E+ A + +G +LF EL++LA + IG+RL L F+VPV+A LTVSLP
Sbjct: 3123 KLLQHCSLVFRRATQHVVSCAWYTALPQLLSQVGSHGAAVGAGGVGGSEIQGLILEAIVKVLEMHPEQAMWSTTGLIFSRDSFRRRAGERILRSAHTRILDAGAEEAARMLLDGKKLFAELLALANDNSEPPPDKRLKIHIGKRLHLLSFLVPVQAALTVSLP 3285
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: W7TMH7_9STRA (Serine threonine-protein kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMH7_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 2.960e-20 Identity = 56/162 (34.57%), Postives = 90/162 (55.56%), Query Frame = 2
Query: 20 ELQQQSTQLVRKAVITIPPYMWYTVLPQLTSRVGHPN----------EEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSL 475
+L Q + + R+A + WYT LPQL S+VG E+ +I+EA+ ++L+ HP+QA+W + L+ S ++ RRR G+ I A R+L+ G E+ A + +G +LF EL++LA + IG+RL L F+VPV+A LT+ +
Sbjct: 358 KLLQHCSLVFRRATQHVVSCAWYTALPQLLSQVGSHGAAVGAGGAVGSEVQGLILEAIVKVLEMHPEQAMWSTTGLIFSRDSFRRRAGERILRSAHTRILDAGAEEAARMLLDGKKLFAELLALANDNSEPPPDKRLKIHIGKRLHLLSFLVPVQAALTMQI 519
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: A0A8J5MGC4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MGC4_9STRA) HSP 1 Score: 94.4 bits (233), Expect = 1.980e-19 Identity = 56/147 (38.10%), Postives = 89/147 (60.54%), Query Frame = 2
Query: 38 TQLVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSLP 478
TQ+V +A+ ++P Y W PQ+TSR+ HPN E++ + + + ++L A+P QA+W L L SLN+ RR EI + A+++ L +G ++ A + EG ++ EELISLA A P + R+ + R R +VP++A LT LP
Sbjct: 542 TQVVDEAIESLPAYEWLVCFPQVTSRICHPNPEVVDSVKKIMIQVLLAYPTQAMWSLLGLSRSLNSQRRNRAREIISSAQQQFLLQGLKEIADSFSEGMKMAEELISLA-AHDPGNSKRKIHIRLSRIR--TRILVPIQAALTTILP 685
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: D0MWH0_PHYIT (Non-specific serine/threonine protein kinase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MWH0_PHYIT) HSP 1 Score: 94.4 bits (233), Expect = 2.060e-19 Identity = 55/147 (37.41%), Postives = 87/147 (59.18%), Query Frame = 2
Query: 38 TQLVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSLP 478
TQ+V +A+ ++P Y W PQ+TSR+ HPN +++ + + ++L A+P QA+W L L SLN+ R+ EI + A+K+ L +G + A + EG ++ EELISLA A P + R+ + R R +VP++A LT LP
Sbjct: 2500 TQVVDEAIESLPAYEWLVCFPQVTSRICHPNPDVVDSVKRIMVQVLLAYPTQAMWSLLGLSRSLNSQRKNRAREIISSAQKQFLHQGLREIADSFSEGMKMAEELISLA-AHDPGNSKRKIHIRLSRIR--TRILVPIQAALTTILP 2643
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: G4YNQ6_PHYSP (Non-specific serine/threonine protein kinase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YNQ6_PHYSP) HSP 1 Score: 94.0 bits (232), Expect = 2.830e-19 Identity = 54/145 (37.24%), Postives = 84/145 (57.93%), Query Frame = 2
Query: 44 LVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSLP 478
+V +A ++P Y W PQ+TSR+ HPN ++ + + + R+L A+P QA+W L L SLN RR EI ++ +K L+ +G ++ A + EGTR+ +ELISLA P + R+ + R R +VP++A LT LP
Sbjct: 2501 IVNEAAESLPAYEWLMCFPQVTSRICHPNPVVVEGVKKIMIRVLHAYPTQAMWPLLGLSRSLNTQRRNRAREIISVTQKELISQGLKEIAESFSEGTRMADELISLAGHD-PGNSQRKIHIRLSRIR--TRILVPIQAALTTILP 2642
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Match: W2QWX7_PHYPN (Non-specific serine/threonine protein kinase (Fragment) n=12 Tax=Phytophthora TaxID=4783 RepID=W2QWX7_PHYPN) HSP 1 Score: 93.2 bits (230), Expect = 5.210e-19 Identity = 54/147 (36.73%), Postives = 89/147 (60.54%), Query Frame = 2
Query: 38 TQLVRKAVITIPPYMWYTVLPQLTSRVGHPNEEILRVIVEALGRLLQAHPKQALWHLSSLVLSLNAARRRVGDEIFALARKRLLEEGREQDAATVQEGTRLFEELISLAEATLPTSRSREATYAIGRRLDLNRFIVPVKAGLTVSLP 478
TQ+V +A+ ++P Y W PQ+TSR+ HPN E++ + + + ++L A+P QA+W L L SLN+ R+ EI + A+++ L +G ++ A + EG ++ EELISLA A P + R+ + R + +VP++A LT LP
Sbjct: 2511 TQVVGEAIASLPAYEWLVCFPQVTSRICHPNPEVVDSVKKIMVQVLVAYPTQAMWSLLGLSRSLNSQRKNRAREIISSAQQQFLLQGLKEIADSFSEGMKMAEELISLA-AHDPGNSKRKIHIRLSRIR--TKILVPIQAALTTILP 2654 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20694.1 >prot_S-ischiensis_contig9.20694.1 ID=prot_S-ischiensis_contig9.20694.1|Name=mRNA_S-ischiensis_contig9.20694.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=162bp AAVSGAGAAAAEHTVGEEGGDHHPAVHVVHGAAAAHVKGGPPERGDTEGHback to top mRNA from alignment at S-ischiensis_contig9:2668012..2672535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20694.1 ID=mRNA_S-ischiensis_contig9.20694.1|Name=mRNA_S-ischiensis_contig9.20694.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4524bp|location=Sequence derived from alignment at S-ischiensis_contig9:2668012..2672535+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2668012..2672535+ >mRNA_S-ischiensis_contig9.20694.1 ID=mRNA_S-ischiensis_contig9.20694.1|Name=mRNA_S-ischiensis_contig9.20694.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=972bp|location=Sequence derived from alignment at S-ischiensis_contig9:2668012..2672535+ (Schizocladia ischiensis KU_0333)back to top |