mRNA_S-ischiensis_contig9.20690.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: D7FT24_ECTSI (Similar to ataxia telangiectasia and Rad3 related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT24_ECTSI) HSP 1 Score: 146 bits (369), Expect = 8.770e-38 Identity = 77/124 (62.10%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 64 MPGWLTAQLKQAQVLEVVEPFWSTVYKLKDPESGRTPPFFLDPNVTVSLERWLSIWCRHLIPHARGPLREVYRACRGAVRSSAGTAQFLLQHLVADALVFGDTEAVDQVLAEVLAVMRATVAPA 435
MP L +L++AQVL VVEPFW++ YKL D PFF D +TVSLERWLS WCR+LI +RGPLR + ACRGAVR+ A AQFLL HLVAD LVFGD EA +QVL EVLAVM PA
Sbjct: 574 MPERLARRLREAQVLSVVEPFWTSTYKLSDRAPSSKEPFFRDRAMTVSLERWLSSWCRYLISRSRGPLRPAFEACRGAVRAHAPMAQFLLTHLVADVLVFGDKEAANQVLEEVLAVMCGASPPA 697
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: A0A7S4J226_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J226_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 2.800e-18 Identity = 55/120 (45.83%), Postives = 70/120 (58.33%), Query Frame = 1
Query: 64 MPGWLTAQLKQAQVLEVVEPFWSTVYKLKDPESGRTPPFFLDPNVTVSLERWLSIWCRHLIPHARGPLREVYR----ACRGAVRSSAGT--AQFLLQHLVADALVFGDTEAVDQVLAEVL 405
M WLT QL +A VLEVVEPFW+T Y D S R PPFF S WLS WCR +I ++G R +R ACR ++RS+ G A+FLL LV D++ FGD+E + E+L
Sbjct: 1226 MSPWLTNQLTEAGVLEVVEPFWNTSYHQSDKASPRKPPFFRKCTTYTS---WLSQWCRFMIFRSKGNSRSRWRHFFHACRSSIRSNPGIRIAEFLLPLLVLDSIAFGDSEDEKNTINELL 1342
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: A0A225WRT9_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WRT9_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 5.690e-12 Identity = 44/140 (31.43%), Postives = 74/140 (52.86%), Query Frame = 1
Query: 61 PMPGWLTAQLKQAQVLEVVEPFWSTVYKLK-------------DPESGRTPPFFLDP---NVT------VSLERWLSIWCRHLIPHARGPLREVYRACRGAVRSSAGTAQFLLQHLVADALVFGDTEAVDQVLAEVLAVM 414
PMP W+ + ++ VL+ VEP+WST Y + DP S + L P ++T S E W+ +WCR LI ++ P R+++ ACR A+ + ++FLL +L+ + L G +E +++ EV+AV+
Sbjct: 1643 PMPEWMKRRFERKDVLQFVEPYWSTDYTVSGRRSSRRNGNSEYDPRSSASADRNLHPAQDDITFYEKYGTSYEEWILMWCRRLINLSQPPERKIFLACRTALPTCPQISRFLLPYLIQNVLRSGRSEVAEELKKEVMAVL 1782
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: A0A024GJI9_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GJI9_9STRA) HSP 1 Score: 70.9 bits (172), Expect = 2.650e-11 Identity = 43/136 (31.62%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 31 TKERGSKGLLPMPGWLTAQLKQAQVLEVVEPFWSTVY--KLKDPESGRTPPFFLDPNVTV------SLERWLSIWCRHLIPHARGPLREVYRACRGAVRSSAGTAQFLLQHLVADALVFGDTEAVDQVLAEVLAVM 414
+ + G KG LP GW+ + + VL+ +EP+WST Y L +G+ P + D N T+ + E W++ WC+ LI ++ P ++++ A AV S A+FLL +L+ + L G+++ +V E+L+V+
Sbjct: 1551 SNQSGEKGDLP--GWMKDRFESRNVLQYIEPYWSTGYTLSLSSDNNGQAPAEY-DQNSTLYERCGKTYEDWIAEWCKRLIHLSQPPEQKIFWASTAAVSSCPQVARFLLPYLIQNVLRTGNSQVYQEVKREILSVI 1683
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: A0A1Z5JGH2_FISSO (Serine/threonine-protein kinase ATR n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JGH2_FISSO) HSP 1 Score: 70.9 bits (172), Expect = 2.660e-11 Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 1
Query: 64 MPGWLTAQLKQAQVLEVVEPFWSTVY-KLKDPESGRTPPFFLDPNVTVSLERWLSIWCRHLIPHARGPLR----EVYRACRGAVRSSAGT--AQFLLQHLVADALVFGDTEAVDQVLAEV 402
M GWL+AQL A VL++VEPFW T + + + + + PPFF N + S W+S WC +L A E++ ACR A+R+ G A++LL L+ D + FGD +L E+
Sbjct: 1666 MSGWLSAQLSNAGVLDIVEPFWWTEFCESEAAVTWKNPPFF---NESPSYFAWMSNWCSYLARRAYDKRETEWSELFYACRTALRTPVGLEIAEYLLPILILDRICFGDAHDEKVILDEI 1782
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: G4YNQ6_PHYSP (Non-specific serine/threonine protein kinase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YNQ6_PHYSP) HSP 1 Score: 70.9 bits (172), Expect = 2.670e-11 Identity = 43/140 (30.71%), Postives = 68/140 (48.57%), Query Frame = 1
Query: 61 PMPGWLTAQLKQAQVLEVVEPFWSTVYKLKDPESGRT----------------------PPFFLDPNVTVSLERWLSIWCRHLIPHARGPLREVYRACRGAVRSSAGTAQFLLQHLVADALVFGDTEAVDQVLAEVLAVM 414
PMP W+ + ++ +VL+ VEP+WST Y + S R S E WL +WCR LI ++ P R+V+ ACR A+ + A+FLL +L+ + L G +E +++ EV+AV+
Sbjct: 1635 PMPEWMKRRFERKEVLQFVEPYWSTNYTVSGGRSSRRNGSSGSDRRSSASADRTLQIARDDILYYEKYGTSYEEWLLMWCRRLISLSQPPERKVFWACRTALATCPQIARFLLPYLIQNVLRSGRSEVGEELKKEVMAVL 1774
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: A0A6G0LH82_9STRA (Non-specific serine/threonine protein kinase n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0LH82_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 1.250e-10 Identity = 40/139 (28.78%), Postives = 71/139 (51.08%), Query Frame = 1
Query: 61 PMPGWLTAQLKQAQVLEVVEPFWSTVYKLKDPESGRTPPFFLDPNVTVSLER---------------------WLSIWCRHLIPHARGPLREVYRACRGAVRSSAGTAQFLLQHLVADALVFGDTEAVDQVLAEVLAVM 414
PMP W+ + ++ +VL+ VEP+WST Y + S RT D + S +R W+ WCR LI ++ P R+++ AC+ A+ + ++FLL +L+ + L G +E +++ E++AV+
Sbjct: 1324 PMPEWMKRRFERKEVLQFVEPYWSTNYTVGKRSSRRTGSGGSDRRSSASADRSLQIARDDISFYEKYGTSYEEWILKWCRRLISLSQAPERKIFWACKTALATCPQISRFLLPYLIQNVLRSGRSEVGEELKKEIMAVL 1462
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: A0A7S2Q5F2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5F2_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 3.950e-10 Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 1
Query: 34 KERGSKGLLPMPGWLTAQLKQAQVLEVVEPFWSTVYKLKDPESGRTPPFFLDPNVTVSLERWLSIWCRHLIPHARGPLREVYR----ACRGAVRSSAG--TAQFLLQHLVADALVFGDTEAVDQVLAEVL 405
KE G M L +L +A+V +VEPFWST Y D + + PPFF + S WLS + ++++ + V++ ACR A+RS AG A+F+ LV D + FGD D + +E+L
Sbjct: 659 KEMGGVDEREMAPLLKEKLDEAEVSNIVEPFWSTNYMQADTTALKPPPFF---KKSSSYFAWLSQFSKYMLTRSHSNRNSVWKDLFYACRSAIRSQAGIDVAEFVFPLLVLDGVCFGDKHEEDAITSELL 785
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: A0A662X608_9STRA (Non-specific serine/threonine protein kinase n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X608_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 5.810e-10 Identity = 43/140 (30.71%), Postives = 67/140 (47.86%), Query Frame = 1
Query: 61 PMPGWLTAQLKQAQVLEVVEPFWSTVYKLKDPESGR-------------TPPFFLDPNVT---------VSLERWLSIWCRHLIPHARGPLREVYRACRGAVRSSAGTAQFLLQHLVADALVFGDTEAVDQVLAEVLAVM 414
PMP W+ + ++ VL+ V+P+WST Y + S R L P + S E WL WCR LI ++ P R+++ ACR A+ + A+FLL +L+ + L G E ++ EV+AV+
Sbjct: 1644 PMPEWMKRRFERKDVLQFVDPYWSTSYTVSSGRSSRHSKNRGADRRSTANADRGLHPALDDISYYEKYGTSYEEWLVTWCRRLIHLSQPPERKIFWACRTALPTCPQIARFLLPYLIQNVLRSGRPEVYAEIKKEVMAVL 1783
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Match: W2QWX7_PHYPN (Non-specific serine/threonine protein kinase (Fragment) n=12 Tax=Phytophthora TaxID=4783 RepID=W2QWX7_PHYPN) HSP 1 Score: 65.1 bits (157), Expect = 2.700e-9 Identity = 41/137 (29.93%), Postives = 69/137 (50.36%), Query Frame = 1
Query: 61 PMPGWLTAQLKQAQVLEVVEPFWSTVYKLKDPESG-RTPPFFLDPNVTVSL------------------ERWLSIWCRHLIPHARGPLREVYRACRGAVRSSAGTAQFLLQHLVADALVFGDTEAVDQVLAEVLAVM 414
PMP W+ + ++ VL+ VEP+WST Y + S R D + S+ E W+ WCR LI ++ P R+++ ACR A+ + ++FLL +L+ + L G +E +++ EV+AV+
Sbjct: 1650 PMPDWMKRRFERKDVLQFVEPYWSTNYVVSGGRSSHRNGSSGSDLRASASVDHPARDDISFYEVYGTSYEDWILNWCRQLISLSQPPERKIFLACRTALPTCPQISRFLLPYLIQNVLRSGRSEVGEELKKEVMAVL 1786 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20690.1 >prot_S-ischiensis_contig9.20690.1 ID=prot_S-ischiensis_contig9.20690.1|Name=mRNA_S-ischiensis_contig9.20690.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=156bp GGGAAPVSSPTKERGSKGLLPMPGWLTAQLKQAQVLEVVEPFWSTVYKLKback to top mRNA from alignment at S-ischiensis_contig9:2655896..2658567+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20690.1 ID=mRNA_S-ischiensis_contig9.20690.1|Name=mRNA_S-ischiensis_contig9.20690.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2672bp|location=Sequence derived from alignment at S-ischiensis_contig9:2655896..2658567+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2655896..2658567+ >mRNA_S-ischiensis_contig9.20690.1 ID=mRNA_S-ischiensis_contig9.20690.1|Name=mRNA_S-ischiensis_contig9.20690.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=936bp|location=Sequence derived from alignment at S-ischiensis_contig9:2655896..2658567+ (Schizocladia ischiensis KU_0333)back to top |