mRNA_S-ischiensis_contig9.20662.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20662.1
Unique NamemRNA_S-ischiensis_contig9.20662.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: A0A2I6U1M4_SACJA (Tic20-like protein n=15 Tax=Saccharina japonica TaxID=88149 RepID=A0A2I6U1M4_SACJA)

HSP 1 Score: 320 bits (821), Expect = 1.640e-103
Identity = 189/368 (51.36%), Postives = 251/368 (68.21%), Query Frame = 1
Query:   13 RASPTVGLSSLRMAATSPVDV---QAERLREQASQLRAEAAALQAQMNEEKQGAALRSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAP-TALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVIGAMNRENPERE 1104
            R+SP   LS +    +S V+V   +A RLRE A+  RA+AA L+ +  +E+Q  A RSFN+FDSN DG VD+ EL+AGLE  LRR FVK+L ARMG   P   +++A+IA +PGG L P++  RKL++ YD+NGDG+LQ  EFA TEELR RLE +F+ QQE  R +RV E ++   +K      E+    G  +P    +D P TA D+A S LPYLLPL+DG+ FAGHLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF +  L+G P+VNKLVRFN++QAINLDIAL  P  L +LA++         D+    PLA+  SD VFV +LAA+AYSV +S+ G  PNK+P++G +NRENP+RE
Sbjct:   53 RSSPC--LSMMATGTSSEVEVAQEKAARLRETAAAFRAQAAELEDKRTQERQAGAERSFNSFDSNQDGAVDIVELKAGLEGPLRRSFVKQLTARMGR-KPDREEIDARIAALPGGSLFPDDLARKLIDTYDQNGDGLLQRSEFAPTEELRTRLENMFRDQQETARQARVEERQRQMEDK---LAAEVGTGAGAVVPAGGVNDGPATAADKALSALPYLLPLVDGISFAGHLFGAFPEQTAWAQPLAAVLLALRSLPFATLVGFFSLSALSGNPQVNKLVRFNMQQAINLDIALIVPGVLGALASV-----SLGQDAYKLVPLAEAGSDVVFVAMLAAVAYSVVTSSTGSFPNKLPLLGRLNRENPDRE 409          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: D8LS19_ECTSI (EF-hand domain-containing protein n=7 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS19_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 1.500e-101
Identity = 183/370 (49.46%), Postives = 245/370 (66.22%), Query Frame = 1
Query:    7 RIRASPTVGLSSLRMAATSPVDVQAERLREQASQLRAEAAALQAQMNEEKQGAALRSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVIGAMNRENPEREGGGD 1116
            R R+S T   SSLRM  +   + +A +LRE A+  RAEAA L+ +   E++  A RSFNTFDSN DG VDVAEL+AGLE  LRR F K L+ARMG   P+  +V+ +IA +PGG L P++   KL++ YD+NGDG+LQ  EFA TEELR RLE +F +Q+EE+R++R+        ++ R           V  P D ND   T  D+A S LPY+LPL DG+VFA HLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF +   +  P++NKLVRFN++QAINLDIAL  P  + ++   V       +D+    PLA  +SD VFV +LAA+AYSVG+SA G  PNK+P++G +NRENP+ + GG+
Sbjct:   55 RRRSSATPATSSLRMV-SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGR-KPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPD-----AGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIWSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAV-----LGSDASKLAPLANASSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGE 412          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: D8LTM8_ECTSI (TIC 20 related, plastid import n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTM8_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 3.210e-98
Identity = 168/338 (49.70%), Postives = 233/338 (68.93%), Query Frame = 1
Query:   79 AERLREQASQLRAEAAALQAQMNEEKQGAALRSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVIGAMNREN 1092
            A +LR  A++LR +A  L+++ + EKQ AA  +F++FD+N DG VDV EL AGLE  LR+DF+KR+   M   P  A +V+ +I+EMPGG LLP E  +KL+E+YD NGDGVLQP EFA   ++R RL+++F  + +E RL   A  E+    +  +   + A++ G+ALPEDFND  PT  D+  S LPY LPL+D LVF  H+F  +P QL++ +PL+A+L++YRS+PFSGL  FFG+Q+ A KPEVNKLVRFNLRQA+ LDIA+FFP+  A +   V        DS    PLA   +D +FVTV+A + YS+ SSA+GV+P  +P++G MNRE+
Sbjct:   88 AAKLRAFAAELRLQAEELESKRDSEKQQAAQEAFDSFDTNDDGTVDVKELIAGLEGQLRKDFIKRMTKTMKRKPSPA-EVDERISEMPGGSLLPMELAQKLIESYDTNGDGVLQPSEFASKADMRVRLDSLFADRAQEARLEAAAAREREIENRGADKARQEAKARGLALPEDFNDGPPTITDKLLSVLPYTLPLMDSLVFGAHIFQTFPTQLSFLEPLVAILLIYRSLPFSGLILFFGLQWFAAKPEVNKLVRFNLRQAVILDIAMFFPSIFAFIITSV-----LGEDSAKLAPLATVCNDVIFVTVVACVLYSIASSAIGVLPESLPILGKMNRES 419          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: D7FRG5_ECTSI (EF-hand domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRG5_ECTSI)

HSP 1 Score: 281 bits (718), Expect = 3.400e-88
Identity = 167/344 (48.55%), Postives = 222/344 (64.53%), Query Frame = 1
Query:   13 RASPTVGLSSLRMAATSPVDVQAERLREQASQLRAEAAALQAQMNEEKQGAALRSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALG 1044
            R+S     SSLRM  +   + +A +LRE A+  RAE          E++  ALRSFNTFDSN DG VD+AEL+AGLE  LRR F K L+ARMG   P+  +V+ +IA +PGG L P+E   KL++ YD+NGDG+LQ  EFA TEELR RLE +  +Q+E++RL+R+ E      +++ + K+       V  P D ND   T  D+A S LPYLLPL+DG++FA HLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF +   +  P VNKLVRFN++QAINLDIAL  P  + ++           AD++   PL+   SD VFV +LAA+AYSVG+SA G
Sbjct:   57 RSSAMPATSSLRMV-SKVAEQKAAKLRETAAAFRAEXXXXXXXXARERRENALRSFNTFDSNKDGSVDIAELKAGLESPLRRSFTKTLQARMGR-KPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLLSQQREDERLARLEE-----RQRQMDDKMRPDTGAVVVSPGDVNDGPATTADKALSALPYLLPLVDGILFAAHLFGAFPEQTAWAQPLAAVLLALRSLPFATLIGFFSLSIGSSNPRVNKLVRFNMQQAINLDIALILPGVVGAITG-----GMLGADAVKLAPLSNAGSDVVFVALLAAVAYSVGTSATG 388          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: D8LS20_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS20_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 1.100e-77
Identity = 149/294 (50.68%), Postives = 195/294 (66.33%), Query Frame = 1
Query:    7 RIRASPTVGLSSLRMAATSPVDVQAERLREQASQLRAEAAALQAQMNEEKQGAALRSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFP 888
            R R+S T   SSLRM  +   + +A +LRE A+  RAEAA L+ +   E++  A RSFNTFDSN DG VDVAEL+AGLE  LRR F K L+ARMG   P+  +V+ +IA +PGG L P++   KL++ YD+NGDG+LQ  EFA TEELR RLE +F +Q+EE+R++R+        ++ R           V  P D ND   T  D+A S LPY+LPL DG+VFA HLF A+ EQ AWAQPL A+L+  RS+PF+ L  FF +   +  P++NKLVRFN++QAINLDIAL  P
Sbjct:   55 RRRSSATPATSSLRMV-SEVAEQRAAKLRETAAAFRAEAAELEQKQARERRENAQRSFNTFDSNKDGSVDVAELKAGLEGPLRRSFTKTLQARMGR-KPSKEEVDDRIAGLPGGTLFPDDLALKLIQTYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXDRMRPD-----AGTVVVSPGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFLEQTAWAQPLAAVLLALRSVPFATLIGFFSLSIGSSNPQINKLVRFNMQQAINLDIALILP 341          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: A0A6H5JY95_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JY95_9PHAE)

HSP 1 Score: 252 bits (643), Expect = 6.900e-77
Identity = 140/306 (45.75%), Postives = 200/306 (65.36%), Query Frame = 1
Query:  172 RSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVE-MARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVIGAMNR 1086
            RSF  FDSN DG V VAEL+AGLE  L++ F K+L ARMG   PT  +VEAKI E+PG  L P++   +L++ YD+NGDGVLQ  EFA TEELRARLE+IF++++EE+  +R AE      ++E + K     + L      D    + T+L++A   LPY+LPL DG+V+A H++S +P+Q+AW++PL+A+L+   ++PF+ L AFFGM  L+    +NKL+RFN+ QAIN DIAL  P+    L           +D+    P+   A+D + V+++ A+AYS+ +SA G IPNKIP  G +NR
Sbjct:  104 RSFAAFDSNKDGAVGVAELKAGLEGPLKKTFTKQLTARMGR-KPTPEEVEAKILELPGRALFPDDLAERLIKLYDQNGDGVLQQSEFAPTEELRARLESIFRERREEELEARQAE-----RKREMDAKTTGKGKMLSSVADSDREAASATSLEKALCALPYILPLSDGIVYAQHIYSTFPQQMAWSEPLVAILIAVNNLPFATLVAFFGMSILSSNQNINKLLRFNMLQAINFDIALIVPSVFGPLLT-----WSLGSDAYKISPVTDIATDILSVSLVLAVAYSIAASATGAIPNKIPFFGKINR 398          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: A0A6H5KUU9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU9_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 5.190e-67
Identity = 122/246 (49.59%), Postives = 165/246 (67.07%), Query Frame = 1
Query:  379 LLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVIGAMNRENPEREGGGD 1116
            L+ +YD+NGDG+LQ  EFA TEELR RLE +F +Q+EE+R++R+         K R      A ++ V+ P D ND   T  D+A S LPY+LPL DG+VFA HLF A+PEQ AWAQPL A+L+  RS+PF+ L  FF +   +  P++NKLVRFN++QAINLDIAL  P  + ++   V       +D+    PLA   SD VFV +LAA+AYSVG+SA G  PNK+P++G +NRENP+ + GG+
Sbjct:   40 LVRSYDQNGDGLLQQSEFAPTEELRTRLENLFSQQREEERVARMEXXXXXXXXKMRPD----AGAVEVS-PGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAQPLAAVLLALRSVPFATLVGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAV-----LGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGE 275          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: A0A6H5JBJ0_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ0_9PHAE)

HSP 1 Score: 218 bits (554), Expect = 8.320e-65
Identity = 137/314 (43.63%), Postives = 183/314 (58.28%), Query Frame = 1
Query:  178 FNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQF-LAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVIGAMNRENPE--REGG 1110
            FNTFDSN DG VD+AEL+AGLE  LRR   K L+ARMG   P+  +V+ +IA +PGG L P+E   KL++ YD+NGDG+LQ  EFA TEELR RLE +F +Q+E++R++R+ E ++   +K       M    G  +                                           AWAQPL A+L+  RS+PF+ L  FF +       P+VNKLVRFN +QAIN+DIAL  P  + ++A  V       AD++   PLA   SD VFV +LAA+AYSVG+SA G  PNK+P++G +NRENPE  +EGG
Sbjct:   47 FNTFDSNKDGSVDIAELKAGLESPLRRGLTKTLQARMGR-KPSKEEVDERIAGLPGGTLFPDELALKLIQTYDQNGDGLLQLSEFAPTEELRTRLEDLFSQQREDERVARMEERQRRMDDK-------MRPDTGAVVT------------------------------------------AWAQPLAAVLLALRSVPFATLIGFFSLSVHRLRNPQVNKLVRFNTQQAINVDIALILPGVVGAIAGAV-----LGADAVKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPENQQEGG 305          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: A0A6H5KVD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD7_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.040e-52
Identity = 91/176 (51.70%), Postives = 122/176 (69.32%), Query Frame = 1
Query:  589 PEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLVVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVIGAMNRENPEREGGGD 1116
            P D ND   T  D+A S LPY+LPL DG+VFA HLF A+PEQ AWA+PL+A+L+  RS+PF+ L  FF +   +  P++NKLVRFN++QAINLDIAL  P  + ++   V       +D+    PLA   SD VFV +LAA+AYSVG+SA G  PNK+P++G +NRENP+ + GG+
Sbjct:   23 PGDVNDGPATTADKALSALPYVLPLADGVVFAAHLFGAFPEQTAWAEPLVAVLLALRSVPFATLIGFFSLSVGSSNPQINKLVRFNMQQAINLDIALILPGVVGAITGAV-----LGSDASKLAPLANAGSDVVFVALLAAVAYSVGTSATGSFPNKLPLLGRLNRENPDNQEGGE 193          
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Match: A0A7S1D297_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D297_CYCTE)

HSP 1 Score: 184 bits (468), Expect = 1.330e-51
Identity = 136/335 (40.60%), Postives = 185/335 (55.22%), Query Frame = 1
Query:   79 AERLREQASQLRAEAAALQAQMNEEKQGAALRSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVPPTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEELRARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDFNDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALL----VVYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALASLAALVGXXXXXXADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVIPNKIPVI 1071
            AERLR  A+QLRAEA+AL+AQ  +E   +  R+F  FD+N DG+V V EL+ GLE+VL+ +                               L E+ ++KL++ +D +GDG LQ +EF   E+ R +L+AI +   E+D   +     K +A+KE     E+A+ L  A  E  ND  P+  D+  S LPYL PLLDGL F   L            P++ LL    ++YR +PFSG  AFF +   +G   +N+LVRFN++QAI LDIALF P   A L ALV           +T    Q  +DAVFVT++AAIAYSVGSS LG  P+K+P I
Sbjct:   14 AERLRSMAAQLRAEASALEAQKAQEIADSTERAFRKFDTNQDGEVSVEELKQGLEKVLKTE-------------------------------LQEDKVKKLMQVFDSSGDGALQLDEFVGIEKFRMQLDAIVR--DEKDAAIKA----KQQAKKE----AELAQ-LAEARMELINDKPPSNSDKFISILPYLFPLLDGLQFGRFLLQGEENN-----PIVGLLAIIFILYRKVPFSGFLAFFALNTFSGNLRLNRLVRFNMQQAIFLDIALFLPGLAAGLYALVSNGLGVQIPESVT----QIGTDAVFVTLIAAIAYSVGSSLLGETPDKLPFI 297          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20662.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I6U1M4_SACJA1.640e-10351.36Tic20-like protein n=15 Tax=Saccharina japonica Ta... [more]
D8LS19_ECTSI1.500e-10149.46EF-hand domain-containing protein n=7 Tax=Ectocarp... [more]
D8LTM8_ECTSI3.210e-9849.70TIC 20 related, plastid import n=2 Tax=Ectocarpus ... [more]
D7FRG5_ECTSI3.400e-8848.55EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
D8LS20_ECTSI1.100e-7750.68EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JY95_9PHAE6.900e-7745.75EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A6H5KUU9_9PHAE5.190e-6749.59Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBJ0_9PHAE8.320e-6543.63EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVD7_9PHAE1.040e-5251.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1D297_CYCTE1.330e-5140.60Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2389569..2391197 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score316.6
Seed ortholog evalue1.6e-83
Seed eggNOG ortholog2880.D8LS19
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009706,GO:0009941,GO:0016020,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0031976,GO:0031984,GO:0034357,GO:0042170,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.protein transport
EggNOG OGs2BYWW@1,2QUSD@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons2
Model size1146
Cds size1146
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817393.8072793-CDS-S-ischiensis_contig9:2389568..23899131622817393.8072793-CDS-S-ischiensis_contig9:2389568..2389913Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2389569..2389913 -
1695741080.9175844-CDS-S-ischiensis_contig9:2389568..23899131695741080.9175844-CDS-S-ischiensis_contig9:2389568..2389913Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2389569..2389913 -
1622817393.8219342-CDS-S-ischiensis_contig9:2390396..23911971622817393.8219342-CDS-S-ischiensis_contig9:2390396..2391197Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2390397..2391197 -
1695741080.9350917-CDS-S-ischiensis_contig9:2390396..23911971695741080.9350917-CDS-S-ischiensis_contig9:2390396..2391197Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2390397..2391197 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20662.1prot_S-ischiensis_contig9.20662.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 2389569..2391197 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20662.1

>prot_S-ischiensis_contig9.20662.1 ID=prot_S-ischiensis_contig9.20662.1|Name=mRNA_S-ischiensis_contig9.20662.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=382bp
SSRIRASPTVGLSSLRMAATSPVDVQAERLREQASQLRAEAAALQAQMNE
EKQGAALRSFNTFDSNGDGQVDVAELRAGLERVLRRDFVKRLKARMGGVP
PTARQVEAKIAEMPGGRLLPEEPLRKLLEAYDKNGDGVLQPEEFARTEEL
RARLEAIFQKQQEEDRLSRVAEWEKTRAEKERETKVEMARSLGVALPEDF
NDDAPTALDRAASGLPYLLPLLDGLVFAGHLFSAYPEQLAWAQPLLALLV
VYRSIPFSGLAAFFGMQFLAGKPEVNKLVRFNLRQAINLDIALFFPTALA
SLAALVGGGGGGGADSLLTGPLAQTASDAVFVTVLAAIAYSVGSSALGVI
PNKIPVIGAMNRENPEREGGGDGPGHGGSEE*
back to top

mRNA from alignment at S-ischiensis_contig9:2389569..2391197-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20662.1 ID=mRNA_S-ischiensis_contig9.20662.1|Name=mRNA_S-ischiensis_contig9.20662.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1629bp|location=Sequence derived from alignment at S-ischiensis_contig9:2389569..2391197- (Schizocladia ischiensis KU_0333)
TCTTCCCGGATCCGTGCAAGCCCGACAGTGGGCCTGTCCAGCCTGCGCAT GGCCGCGACCAGCCCGGTCGATGTGCAAGCTGAGCGCCTCCGGGAACAGG CGTCCCAGCTGCGTGCAGAGGCCGCGGCGCTTCAGGCGCAGATGAATGAA GAAAAGCAGGGCGCGGCCTTGCGCTCTTTCAACACTTTCGACTCCAACGG GGACGGCCAGGTCGACGTGGCAGAGCTGCGCGCGGGCTTGGAGAGGGTGT TGCGCCGGGACTTTGTGAAGCGGCTCAAGGCCCGGATGGGGGGCGTTCCG CCGACGGCGCGGCAGGTGGAGGCCAAGATCGCTGAGATGCCCGGCGGGAG GCTGCTGCCGGAGGAGCCCCTGCGGAAGCTTCTGGAAGCCTACGACAAGA ATGGCGACGGCGTGCTGCAGCCCGAGGAGTTTGCGCGCACCGAGGAGCTC CGCGCCCGCCTCGAGGCCATCTTCCAGAAGCAGCAGGAGGAGGATCGGCT CTCGAGGGTGGCAGAGTGGGAGAAGACGCGCGCGGAGAAGGAAAGGGAAA CCAAGGTGGAGATGGCTCGGTCCCTCGGGGTGGCCCTCCCGGAGGACTTC AACGACGACGCGCCCACCGCCCTGGACAGGGCGGCCTCCGGGCTGCCGTA CCTGCTGCCCCTCCTGGACGGACTGGTGTTTGCGGGTCACCTATTCAGCG CCTACCCCGAGCAGTTGGCGTGGGCACAGCCGCTCTTAGCCCTCTTGGTC GTCTACAGGTCCATCCCCTTCTCCGGGCTCGCGGCTTTCTTCGGCATGCA GGTGTGTTTTTTTTTTTGTGAGTGTGGGTGTTGGCGTGTTGGATTCGGTC CGGGTTACCTCTGTATACTTTTACTACTGTAGTAGGCAAACCCGAAGTTT TGACTTAGGGCTGTCGGCATTGCATGCAAGGTTATGTCGCAAGACAAGCC AATGAGTACGCTGTACATACGTGTAGTAGTCGCTGTGGGCATGTGGGTGC AGCACTGCACGTGCGCGCTGCGGAAGAACAGAGTGTGTGAGCGCCCGCCA ATAGTCGCAGCAGGCCTTGTGTGCGGCTGCTGTGTGTTGAAACACCCCCA CCAGACCCGCGGCAGCGATGCTATCCTCCTAAAACGCTTCTCATCACCCG CGATGTCCGTCTCTTGTAGCTCTGCGTGGTGTTGACTGCCCTCCTTGCCG CCCCCTCACCTTCCCCCCCTCCGTTCCACCCCGCTCCTGCCCCCCGGCCG CCCTCCCCCGCACCGTCGCACGACGCCTCCACAGTTCCTGGCGGGCAAAC CCGAGGTGAACAAGCTGGTGCGGTTCAACCTTCGCCAGGCCATTAACCTC GACATCGCCCTCTTCTTCCCCACCGCGCTGGCTTCGCTGGCGGCCTTGGT GGGCGGCGGCGGCGGCGGCGGAGCAGACAGCCTCCTGACGGGGCCCCTCG CGCAGACGGCCTCCGACGCGGTGTTCGTCACCGTCCTGGCCGCTATCGCC TACTCGGTCGGCTCGTCCGCCCTGGGCGTCATCCCCAACAAGATTCCGGT CATTGGCGCCATGAACCGGGAGAACCCTGAGCGGGAAGGCGGCGGGGACG GGCCTGGGCACGGGGGCTCTGAGGAATGA
back to top

Coding sequence (CDS) from alignment at S-ischiensis_contig9:2389569..2391197-

>mRNA_S-ischiensis_contig9.20662.1 ID=mRNA_S-ischiensis_contig9.20662.1|Name=mRNA_S-ischiensis_contig9.20662.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2292bp|location=Sequence derived from alignment at S-ischiensis_contig9:2389569..2391197- (Schizocladia ischiensis KU_0333)
TCTTCCCGGATCCGTGCAAGCCCGACAGTGGGCCTGTCCAGCCTGCGCAT
GGCCGCGACCAGCCCGGTCGATGTGCAAGCTGAGCGCCTCCGGGAACAGG
CGTCCCAGCTGCGTGCAGAGGCCGCGGCGCTTCAGGCGCAGATGAATGAA
GAAAAGCAGGGCGCGGCCTTGCGCTCTTTCAACACTTTCGACTCCAACGG
GGACGGCCAGGTCGACGTGGCAGAGCTGCGCGCGGGCTTGGAGAGGGTGT
TGCGCCGGGACTTTGTGAAGCGGCTCAAGGCCCGGATGGGGGGCGTTCCG
CCGACGGCGCGGCAGGTGGAGGCCAAGATCGCTGAGATGCCCGGCGGGAG
GCTGCTGCCGGAGGAGCCCCTGCGGAAGCTTCTGGAAGCCTACGACAAGA
ATGGCGACGGCGTGCTGCAGCCCGAGGAGTTTGCGCGCACCGAGGAGCTC
CGCGCCCGCCTCGAGGCCATCTTCCAGAAGCAGCAGGAGGAGGATCGGCT
CTCGAGGGTGGCAGAGTGGGAGAAGACGCGCGCGGAGAAGGAAAGGGAAA
CCAAGGTGGAGATGGCTCGGTCCCTCGGGGTGGCCCTCCCGGAGGACTTC
AACGACGACGCGCCCACCGCCCTGGACAGGGCGGCCTCCGGGCTGCCGTA
CCTGCTGCCCCTCCTGGACGGACTGGTGTTTGCGGGTCACCTATTCAGCG
CCTACCCCGAGCAGTTGGCGTGGGCACAGCCGCTCTTAGCCCTCTTGGTC
GTCTACAGGTCCATCCCCTTCTCCGGGCTCGCGGCTTTCTTCGGCATGCA
GTCTTCCCGGATCCGTGCAAGCCCGACAGTGGGCCTGTCCAGCCTGCGCA
TGGCCGCGACCAGCCCGGTCGATGTGCAAGCTGAGCGCCTCCGGGAACAG
GCGTCCCAGCTGCGTGCAGAGGCCGCGGCGCTTCAGGCGCAGATGAATGA
AGAAAAGCAGGGCGCGGCCTTGCGCTCTTTCAACACTTTCGACTCCAACG
GGGACGGCCAGGTCGACGTGGCAGAGCTGCGCGCGGGCTTGGAGAGGGTG
TTGCGCCGGGACTTTGTGAAGCGGCTCAAGGCCCGGATGGGGGGCGTTCC
GCCGACGGCGCGGCAGGTGGAGGCCAAGATCGCTGAGATGCCCGGCGGGA
GGCTGCTGCCGGAGGAGCCCCTGCGGAAGCTTCTGGAAGCCTACGACAAG
AATGGCGACGGCGTGCTGCAGCCCGAGGAGTTTGCGCGCACCGAGGAGCT
CCGCGCCCGCCTCGAGGCCATCTTCCAGAAGCAGCAGGAGGAGGATCGGC
TCTCGAGGGTGGCAGAGTGGGAGAAGACGCGCGCGGAGAAGGAAAGGGAA
ACCAAGGTGGAGATGGCTCGGTCCCTCGGGGTGGCCCTCCCGGAGGACTT
CAACGACGACGCGCCCACCGCCCTGGACAGGGCGGCCTCCGGGCTGCCGT
ACCTGCTGCCCCTCCTGGACGGACTGGTGTTTGCGGGTCACCTATTCAGC
GCCTACCCCGAGCAGTTGGCGTGGGCACAGCCGCTCTTAGCCCTCTTGGT
CGTCTACAGGTCCATCCCCTTCTCCGGGCTCGCGGCTTTCTTCGGCATGC
AGTTCCTGGCGGGCAAACCCGAGGTGAACAAGCTGGTGCGGTTCAACCTT
CGCCAGGCCATTAACCTCGACATCGCCCTCTTCTTCCCCACCGCGCTGGC
TTCGCTGGCGGCCTTGGTGGGCGGCGGCGGCGGCGGCGGAGCAGACAGCC
TCCTGACGGGGCCCCTCGCGCAGACGGCCTCCGACGCGGTGTTCGTCACC
GTCCTGGCCGCTATCGCCTACTCGGTCGGCTCGTCCGCCCTGGGCGTCAT
CCCCAACAAGATTCCGGTCATTGGCGCCATGAACCGGGAGAACCCTGAGC
GGGAAGGCGGCGGGGACGGGCCTGGGCACGGGGGCTCTGAGGAATGATTC
CTGGCGGGCAAACCCGAGGTGAACAAGCTGGTGCGGTTCAACCTTCGCCA
GGCCATTAACCTCGACATCGCCCTCTTCTTCCCCACCGCGCTGGCTTCGC
TGGCGGCCTTGGTGGGCGGCGGCGGCGGCGGCGGAGCAGACAGCCTCCTG
ACGGGGCCCCTCGCGCAGACGGCCTCCGACGCGGTGTTCGTCACCGTCCT
GGCCGCTATCGCCTACTCGGTCGGCTCGTCCGCCCTGGGCGTCATCCCCA
ACAAGATTCCGGTCATTGGCGCCATGAACCGGGAGAACCCTGAGCGGGAA
GGCGGCGGGGACGGGCCTGGGCACGGGGGCTCTGAGGAATGA
back to top