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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | signal peptide |
| Exons | 3 |
| Model size | 715 |
| Cds size | 708 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817367.303473-CDS-S-ischiensis_contig9:2308431..2308782 | 1622817367.303473-CDS-S-ischiensis_contig9:2308431..2308782 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2308432..2308782 - |
| 1695741060.8259435-CDS-S-ischiensis_contig9:2308431..2308782 | 1695741060.8259435-CDS-S-ischiensis_contig9:2308431..2308782 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2308432..2308782 - |
| 1622817367.3192115-CDS-S-ischiensis_contig9:2310298..2310474 | 1622817367.3192115-CDS-S-ischiensis_contig9:2310298..2310474 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2310299..2310474 - |
| 1695741060.836781-CDS-S-ischiensis_contig9:2310298..2310474 | 1695741060.836781-CDS-S-ischiensis_contig9:2310298..2310474 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2310299..2310474 - |
| 1622817367.3311796-CDS-S-ischiensis_contig9:2310748..2310929 | 1622817367.3311796-CDS-S-ischiensis_contig9:2310748..2310929 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2310749..2310929 - |
| 1695741060.8483806-CDS-S-ischiensis_contig9:2310748..2310929 | 1695741060.8483806-CDS-S-ischiensis_contig9:2310748..2310929 | Schizocladia ischiensis KU_0333 | CDS | S-ischiensis_contig9 2310749..2310929 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817367.3417966-UTR-S-ischiensis_contig9:2310929..2310936 | 1622817367.3417966-UTR-S-ischiensis_contig9:2310929..2310936 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2310930..2310936 - |
| 1695741060.8663626-UTR-S-ischiensis_contig9:2310929..2310936 | 1695741060.8663626-UTR-S-ischiensis_contig9:2310929..2310936 | Schizocladia ischiensis KU_0333 | UTR | S-ischiensis_contig9 2310930..2310936 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20654.1 >prot_S-ischiensis_contig9.20654.1 ID=prot_S-ischiensis_contig9.20654.1|Name=mRNA_S-ischiensis_contig9.20654.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=236bp
MNNKKGKRTGRWRPRGMGVLLLASVLAAVKGQPGGMDPAAMQQMMQQQMG
PPPAHAPNRVGQILRVGLAAAQAAAGVVGRHPSSSAGVSLVVLLAVYTAL
ESSRSGLVVCSSLHLTIFQPSAKYIAGALQAGAAEEEEEEEEEAQGGRGT
GRREETPEAVARRLLSLHRPREPPAETAGAAATGAGGAGAAVKAALAGAR
GMAEARVAAGGDGEPTAPAGLAELLGRIEEAGGGPG back to topmRNA from alignment at S-ischiensis_contig9:2308432..2310936- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_S-ischiensis_contig9.20654.1 ID=mRNA_S-ischiensis_contig9.20654.1|Name=mRNA_S-ischiensis_contig9.20654.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=2505bp|location=Sequence derived from alignment at S-ischiensis_contig9:2308432..2310936- (Schizocladia ischiensis KU_0333)
GTGCACCATGAATAATAAGAAGGGGAAGAGAACGGGGCGTTGGCGCCCCC
GAGGGATGGGGGTCTTGCTGCTAGCATCTGTACTAGCCGCGGTGAAGGGC
CAACCTGGCGGCATGGACCCCGCGGCCATGCAGCAAATGATGCAACAACA
GATGGGCCCCCCGCCGGCACATGCCCCCAACCGCGTAGGTAAGAGGCTCC
CCGGTTCCCGGACACGATTTCCTGTTCACTGCCAGAGCCTGTCCTCCCTC
TCTCCTCTGCCGCGAGCACTCCCCTCTCGCCCCGCTGCAGCTGCCGGGCC
AAAACCTGCGGGCCTTGCCGTCAACCTGCCAGCCACACAGCCAGCCCCAG
CCCCCAACCACGGCCTCAAGGCCCCTCTTTGCATCCCCTACCCCGCTCTT
CCCTACCCTTCCCTTCTCCGCCCGATGTTCCCCTGTCGTCCGCTCTTGAT
CGTCGCGAGCAGGCCAGATCTTGCGTGTGGGCTTGGCGGCGGCCCAGGCG
GCCGCCGGCGTCGTTGGCCGGCACCCGTCCTCCTCGGCAGGCGTCTCCTT
GGTGGTGCTGCTTGCTGTCTACACAGCCCTTGAGAGCTCGCGGTCCGGCC
TCGTCGTGTGCTCCAGCCTGCACCTGACAATCTTCCAGGCGAGTTTACGT
ATACTTCGAAGCATGCAGAGCCCCACTGGCGCAGTTGCAAGGCCTGCCAG
GCCGCATGGGCACCCGGTTGCCAGTGATGGAACATCTAAGCAAATCTACC
TATTTATCGACAGTACTGTTCTAGTTTGAGTGGTAGATAAGCTGCGAGTT
CCAGGCCCCGTGCCCAAACGCTCGTCCCGAAACGGAACTCAACGAAGCCC
TTCTTCCCCTCGCAGGGCAAAAAGAAAATGAAATATAAAGAAGCAACTGG
GCGGGGCAGGGAAAAGGAAGGGGCGGGGAAGGGGAGTCTCTTGTGCTCAC
AGTGGGGCATGCGGGTAGGGCAGGCGGGGGCTAGACCGGACACGAACTCT
GAGCTCACGACGTACCTGTGGAAGCGCACGTAGACCAGAGAGTGTGAGCA
AGTGCCGCAGTGTATACCGCGCACGAGCTAGGTGACCACGGAGAGCGAAC
TCTAACTAACACGAAGCCAACGTCACAATGGTGTGGCCAGCACCAGAGAG
CCGCGAACACAACACCAAAGGCTAGGTGAAGTGGTCACTGAGCTCGCTGC
ACCACGAGGCACGTGTCACGAGAGCGGGTCCACAGCAACGCCTTCCAGGA
GCGTGCCACAGCAACGTGTGGTGGTTGAACTAGGAACCCGGAAGTGGGTC
GGGAACCTGGGCGCCAGAAGAAGACGGGGCACTCAAGTGCCAACTGGTCC
TCATACCGAGGCTATTCAGTGTTGTGGGAGGCACCAGTGTGTATGGCAGA
GATGAAATGAAGGAACCACATGGACCAATGGCGTATGCAGCATCAAAGGA
AAGATGATGATCACAAACCGGAACAGGCCGCAATGGTATTATATTCTATC
GACAGGCGATATTCGATAGTTTGACCCACACTAAATCCAAGTAGCTAGTA
ACACCACCCACAGAATCAGTCGAGCCCGATAACTATCTACTGATCGACAT
TCCATCACTGCCGGTTGCGCGCCCGATGGGCGAACAGGGCCTAAGTAGCG
ACGCGCCTGATCGACCGCTTGGCTGGGCCATGATACCTGCAGAGAACAGT
GCCGGCCGGGCCTACCGTAGCGACGCGCTCGCATTGGTTAGTGGGGGCGT
GGTTCAGTTACTCGGACAAGTAGTTTAGAGAAGGCGTGTGCTCCTTCTGA
GGCATGGGCGCCGCGAATTACCTGTCCGCCCGTCCCACTCCCCCTCCCCC
TCCCCCGTTTGTGCCTCTCACCGACCGACCAACCAAACCCTCTCGCCCCG
GCCAAACGCATGGTACTACCATGTCACGATGCAGCCCTCCGACATGGTCA
CTACTACAGTAGTACGAGAACACGCAGCCCTTAAATGGGACAACCACTGA
TACGAGAACACTCAGTCTCACATACGTGCGATTGTACCTCGCTACGATTT
ATACGAATCACTGCTCCCCCTCCCCCGTCCATGCCTCTCACCCACCGACA
AAACCTCCCGCCCCGCCAAACGCGTCACGGTACTTGTACCGTATCACGAT
GCAGCCCTCCGCCAAGTACATCGCCGGCGCGCTGCAAGCTGGGGCGGCAG
AGGAGGAGGAGGAAGAAGAAGAAGAGGCGCAGGGGGGGAGGGGCACCGGG
CGAAGAGAGGAGACGCCCGAAGCGGTGGCACGACGCCTGCTGTCCCTGCA
CAGGCCGCGGGAACCTCCCGCCGAAACCGCAGGAGCCGCCGCCACAGGAG
CCGGAGGAGCAGGAGCAGCAGTGAAGGCAGCCTTGGCAGGGGCTAGGGGT
ATGGCCGAGGCGCGGGTGGCGGCGGGCGGCGATGGCGAGCCGACCGCTCC
CGCGGGCCTGGCAGAGTTGCTGGGGCGCATTGAGGAGGCCGGGGGCGGGC
CAGGG back to topCoding sequence (CDS) from alignment at S-ischiensis_contig9:2308432..2310936- >mRNA_S-ischiensis_contig9.20654.1 ID=mRNA_S-ischiensis_contig9.20654.1|Name=mRNA_S-ischiensis_contig9.20654.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1416bp|location=Sequence derived from alignment at S-ischiensis_contig9:2308432..2310936- (Schizocladia ischiensis KU_0333)
ATGAATAATAAGAAGGGGAAGAGAACGGGGCGTTGGCGCCCCCGAGGGAT
GGGGGTCTTGCTGCTAGCATCTGTACTAGCCGCGGTGAAGGGCCAACCTG
GCGGCATGGACCCCGCGGCCATGCAGCAAATGATGCAACAACAGATGGGC
CCCCCGCCGGCACATGCCCCCAACCGCGTAGATGAATAATAAGAAGGGGA
AGAGAACGGGGCGTTGGCGCCCCCGAGGGATGGGGGTCTTGCTGCTAGCA
TCTGTACTAGCCGCGGTGAAGGGCCAACCTGGCGGCATGGACCCCGCGGC
CATGCAGCAAATGATGCAACAACAGATGGGCCCCCCGCCGGCACATGCCC
CCAACCGCGTAGGCCAGATCTTGCGTGTGGGCTTGGCGGCGGCCCAGGCG
GCCGCCGGCGTCGTTGGCCGGCACCCGTCCTCCTCGGCAGGCGTCTCCTT
GGTGGTGCTGCTTGCTGTCTACACAGCCCTTGAGAGCTCGCGGTCCGGCC
TCGTCGTGTGCTCCAGCCTGCACCTGACAATCTTCCAGGCCAGATCTTGC
GTGTGGGCTTGGCGGCGGCCCAGGCGGCCGCCGGCGTCGTTGGCCGGCAC
CCGTCCTCCTCGGCAGGCGTCTCCTTGGTGGTGCTGCTTGCTGTCTACAC
AGCCCTTGAGAGCTCGCGGTCCGGCCTCGTCGTGTGCTCCAGCCTGCACC
TGACAATCTTCCAGCCCTCCGCCAAGTACATCGCCGGCGCGCTGCAAGCT
GGGGCGGCAGAGGAGGAGGAGGAAGAAGAAGAAGAGGCGCAGGGGGGGAG
GGGCACCGGGCGAAGAGAGGAGACGCCCGAAGCGGTGGCACGACGCCTGC
TGTCCCTGCACAGGCCGCGGGAACCTCCCGCCGAAACCGCAGGAGCCGCC
GCCACAGGAGCCGGAGGAGCAGGAGCAGCAGTGAAGGCAGCCTTGGCAGG
GGCTAGGGGTATGGCCGAGGCGCGGGTGGCGGCGGGCGGCGATGGCGAGC
CGACCGCTCCCGCGGGCCTGGCAGAGTTGCTGGGGCGCATTGAGGAGGCC
GGGGGCGGGCCAGGGCCCTCCGCCAAGTACATCGCCGGCGCGCTGCAAGC
TGGGGCGGCAGAGGAGGAGGAGGAAGAAGAAGAAGAGGCGCAGGGGGGGA
GGGGCACCGGGCGAAGAGAGGAGACGCCCGAAGCGGTGGCACGACGCCTG
CTGTCCCTGCACAGGCCGCGGGAACCTCCCGCCGAAACCGCAGGAGCCGC
CGCCACAGGAGCCGGAGGAGCAGGAGCAGCAGTGAAGGCAGCCTTGGCAG
GGGCTAGGGGTATGGCCGAGGCGCGGGTGGCGGCGGGCGGCGATGGCGAG
CCGACCGCTCCCGCGGGCCTGGCAGAGTTGCTGGGGCGCATTGAGGAGGC
CGGGGGCGGGCCAGGG back to top
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