mRNA_S-ischiensis_contig9.20643.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20643.1
Unique NamemRNA_S-ischiensis_contig9.20643.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: D7FMU9_ECTSI (Putative serine-threonine protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMU9_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 6.110e-104
Identity = 148/215 (68.84%), Postives = 180/215 (83.72%), Query Frame = 1
Query:   16 MPYESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMV 660
            M YE+C+KEVGLL++L SPNIV LH+CFL+ N LWVV++W+DGGDLKGV+ RTK+A   + E+TVWGYF QIC+A+LHMH +RIIHRD+KPAN+ V +DG VKL DLGLGRYL+ +SV A SQVGTPLYMSPETL+GQG++M SDIWSLGCVLYELA L SPFA +HLTM  LF KIV+AEY P+D  +YS  L+NL+ HLL+ DP  RPRI+MV
Sbjct:  211 MTYETCVKEVGLLKNLASPNIVKLHTCFLDHNALWVVMDWMDGGDLKGVLRRTKQAGQRLDEITVWGYFTQICDALLHMHGERIIHRDVKPANVFVSRDGIVKLGDLGLGRYLSARSVLAMSQVGTPLYMSPETLKGQGHDMGSDIWSLGCVLYELAQLESPFAGKHLTMKTLFRKIVQAEYPPLDCKIYSPCLTNLVAHLLMPDPTIRPRIEMV 425          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A6H5KNN9_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNN9_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 2.220e-93
Identity = 153/277 (55.23%), Postives = 186/277 (67.15%), Query Frame = 1
Query:   16 MPYESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKG----------------------------------------------VISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMVAPAAHLALCAEQAGVQ 708
            M YE+C+KEVGLL++L SPNIV LH+CFL  N LWVV++W+DGGDLKG                                              V+ RTK++   + E+TVWGYF QIC+A+LHMH +RIIHRD+KPAN+ V +DG VKL DLGLGRYL+ +SV A SQVGTPLYMSPETL+GQGY+M SDIWSLGCVLYELA L SPFA +HLTM  LF KIV+AEY P+D   YS  L+NL+ HLL+ DP  RPRI++V  AA LA  A   G++
Sbjct:  466 MTYETCVKEVGLLKNLASPNIVKLHTCFLGHNALWVVMDWMDGGDLKGTEVSVVLFEGVAGMGMSWRQVIAVELRQYTDPTSCSTPKTTTAASGVLRRTKQSGRRLDEITVWGYFTQICDALLHMHGERIIHRDIKPANVFVSRDGIVKLGDLGLGRYLSARSVLAMSQVGTPLYMSPETLKGQGYDMGSDIWSLGCVLYELAQLESPFAGKHLTMKTLFRKIVQAEYPPLDCKTYSPCLTNLVAHLLMPDPTIRPRIELVHQAAQLAFEATLKGIE 742          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A7S2C573_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C573_9STRA)

HSP 1 Score: 219 bits (559), Expect = 1.740e-66
Identity = 108/210 (51.43%), Postives = 144/210 (68.57%), Query Frame = 1
Query:   31 CLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMV 660
            CLKEV LL+SL+ PN++     F+E N L ++ EW   GDLK  I + ++ +A   E  +W YF QIC A+ HMH +RI+HRDLKPANI +  +GTVK+ DLGLGR L+  +V A S+VGTPLYMSPE L+G GY+  SD+WS+GC+LYELAML SPF +  L +  LF KI +A++ P+  H YS  L NL   ++  DP  RPR++ V
Sbjct:   76 CLKEVRLLQSLRHPNVIEYLDSFIEGNELIIIFEWAAAGDLKRQIRKAQEREARFEERVIWRYFAQICEAIQHMHERRIMHRDLKPANIFLTLNGTVKVGDLGLGRELSEHTVEAHSKVGTPLYMSPEVLRGDGYDFRSDVWSVGCLLYELAMLKSPFKSEGLNLYSLFQKISKADFQPLPVH-YSEDLRNLAYSMINIDPQQRPRMEEV 284          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A812TRW5_9DINO (Nekl-3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TRW5_9DINO)

HSP 1 Score: 217 bits (552), Expect = 3.320e-66
Identity = 104/211 (49.29%), Postives = 140/211 (66.35%), Query Frame = 1
Query:   13 EMPYESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRP 645
            E   E CLKE+ L++S+   NI++ H  F+    LW+V E+ + GDLK  + + ++  A   E  +W YF Q+  AV HMH + ++HRDLKPANI +  +GTVK+ DLGLGRYL+  ++ AFS+VGTPLYMSPE LQG+GY+  SD+WSLGCVLYELAML SPF    L +  LF KI +  Y  +   LYS  L +L+  +L +DP  RP
Sbjct:    4 EKSREKCLKEIHLVQSVSHRNIIAFHDAFIVNKELWLVFEYAEAGDLKRQLRKARERNARFDERVIWKYFSQVAAAVAHMHERHVMHRDLKPANIFLTLNGTVKVGDLGLGRYLSEHTLEAFSKVGTPLYMSPEVLQGKGYDYKSDVWSLGCVLYELAMLISPFKEEGLNLYGLFQKISKGTYPGIST-LYSTELQDLVARMLSSDPAARP 213          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A7S2CWM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CWM8_9STRA)

HSP 1 Score: 220 bits (560), Expect = 2.130e-65
Identity = 117/225 (52.00%), Postives = 147/225 (65.33%), Query Frame = 1
Query:   22 YESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVD----RHL-YSARLSNLIDHLLVADPNCRPRIDMVAPAAHLA 681
            +  CLKEVGLLRSL+  NI+     FL    L++VLEW   GDLK +IS  K     + E  VW YF Q   A+ HMH  RI+HRDLKP+N+ V +DG +KL DLGLGRYL+++S+ AFSQVGTPLYMSPE L+G+G+   SDIWSLGC+LYELA L SPF  R LTM +LF  IV  +Y  +      HL YS  + ++++ +L  D   RP I  VA  A LA
Sbjct:  147 HAKCLKEVGLLRSLKHHNIIRYLDSFLHGEELYIVLEWASKGDLKDLISSYKAKNQTLGEHLVWTYFSQCAEAIRHMHEVRIMHRDLKPSNVFVMEDGRLKLGDLGLGRYLDLQSIMAFSQVGTPLYMSPEVLRGEGHHFSSDIWSLGCMLYELAHLRSPFQQRGLTMDRLFLNIVNGDYPKIGGAEMAHLNYSQNMVSMVEGMLQTDSAHRPTISWVANHALLA 371          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: F0Y2C1_AURAN (Protein kinase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2C1_AURAN)

HSP 1 Score: 213 bits (542), Expect = 7.400e-65
Identity = 110/212 (51.89%), Postives = 139/212 (65.57%), Query Frame = 1
Query:   25 ESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMV 660
            E CLKEV LL+SL  PNI+      +E + L +V EW   GDLK  I +  + K    E  +W YF QIC+A+ HMH QRI+HRDLKPAN+ +  +GTVK+ DLGLGR ++  +  A S+VGTPLYMSPE L+G GY+  SD+WSLGCVLYELAML SPF A  L +  LF KI +A+Y P+    YSA L +L   +L  DP  RP +  V
Sbjct:   46 EKCLKEVRLLQSLHHPNIIRYLDSLIEGDELVIVFEWAAAGDLKRQIRKAVERKQGFEERVIWKYFSQICDALAHMHEQRILHRDLKPANVFLTLNGTVKVGDLGLGRMMSEHTFEAHSKVGTPLYMSPEVLRGDGYDWKSDVWSLGCVLYELAMLRSPFKAEGLNLYSLFQKISKADYEPLP-DTYSAPLRDLATAMLSVDPAERPDVAYV 256          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A7S1GED1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GED1_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.140e-64
Identity = 104/216 (48.15%), Postives = 145/216 (67.13%), Query Frame = 1
Query:   13 EMPYESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMV 660
            E   E CLKE+ L++ L  PNI+     F+E+N L +V E+ + GDLK  + + ++ +A   E  +W YF QI  A+ HMH +R++HRDLKPAN+ +  +GTVK+ DLGLGR+ +  ++ A+S+VGTPLYMSPE L+G+GYE  SD+WSLGCVLYELAML SPF    L +  LF KI + +Y PV   +YS  L +L   +L  DP+ RP ++ V
Sbjct:   72 EKSREKCLKEIRLVQQLDHPNIIRYLDSFIEDNQLHLVFEYAEAGDLKRQLRKAREREARFDERVIWKYFSQIAEALRHMHERRVMHRDLKPANVFLTLNGTVKVGDLGLGRHFSEATMEAYSKVGTPLYMSPEVLRGKGYEWKSDVWSLGCVLYELAMLTSPFKEEGLNLYGLFQKITKGDYAPVSS-VYSPELRDLAHRMLSVDPDGRPDMEEV 286          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A8C9SXU8_SCLFO (Serine/threonine-protein kinase Nek7-like n=6 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9SXU8_SCLFO)

HSP 1 Score: 214 bits (544), Expect = 1.510e-64
Identity = 103/212 (48.58%), Postives = 138/212 (65.09%), Query Frame = 1
Query:   25 ESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMV 660
            + C+KE+ LL+ L  PNI+  H+ F+EEN L +VLE  D GDL  +I   KK +  + E TVW YF+Q+C+A+ HMHS+R++HRD+KPAN+ +   G VKL DLGLGR+ + K+  A S VGTP YMSPE +   GY   SDIWSLGC+LYE+A L SPF    + +  L  KI + +Y P+  H YS  L  L+D  + +DP  RP I  V
Sbjct:   90 QDCIKEIDLLKQLNHPNIIKYHASFIEENELNIVLELADAGDLSRMIKHFKKQRRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAAGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEIGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPAHHYSEELRKLVDMCINSDPEKRPDITYV 301          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A665X3W7_ECHNA (NIMA related kinase 7 n=1 Tax=Echeneis naucrates TaxID=173247 RepID=A0A665X3W7_ECHNA)

HSP 1 Score: 213 bits (542), Expect = 3.200e-64
Identity = 102/212 (48.11%), Postives = 137/212 (64.62%), Query Frame = 1
Query:   25 ESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMV 660
            + C+KE+ LL+ L  PN++  H+ F+E+N L +VLE  D GDL  +I   KK K  + E TVW YF+Q+C+A+ HMHS+R++HRD+KPAN+ +   G VKL DLGLGR+ + K+  A S VGTP YMSPE +   GY   SDIWSLGC+LYE+A L SPF    + +  L  KI + +Y P+    YS  L NL+D  +  DP  RP I  V
Sbjct:   94 QDCIKEIDLLKQLNHPNVIKYHASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRNLVDMCINPDPEKRPDITYV 305          
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Match: A0A672GQ60_SALFA (Protein kinase domain-containing protein n=63 Tax=Clupeocephala TaxID=186625 RepID=A0A672GQ60_SALFA)

HSP 1 Score: 212 bits (539), Expect = 4.330e-64
Identity = 101/212 (47.64%), Postives = 137/212 (64.62%), Query Frame = 1
Query:   25 ESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVISRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDGTVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLGCVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDHLLVADPNCRPRIDMV 660
            + C+KE+ LL+ L  PN++  H+ F+E+N L +VLE  D GDL  +I   KK +  + E TVW YF+Q+C+A+ HMHS+R++HRD+KPAN+ +   G VKL DLGLGR+ + K+  A S VGTP YMSPE +   GY   SDIWSLGC+LYE+A L SPF    + +  L  KI + +Y P+    YS  L NL+D  +  DP  RP I  V
Sbjct:   73 QDCIKEIDLLKQLNHPNVIKYHASFIEDNELNIVLELADAGDLSRMIKHFKKQRRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRNLVDMCINPDPEKRPDITYV 284          
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20643.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMU9_ECTSI6.110e-10468.84Putative serine-threonine protein kinase n=1 Tax=E... [more]
A0A6H5KNN9_9PHAE2.220e-9355.23Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A7S2C573_9STRA1.740e-6651.43Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A812TRW5_9DINO3.320e-6649.29Nekl-3 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A7S2CWM8_9STRA2.130e-6552.00Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
F0Y2C1_AURAN7.400e-6551.89Protein kinase domain-containing protein (Fragment... [more]
A0A7S1GED1_9STRA1.140e-6448.15Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A8C9SXU8_SCLFO1.510e-6448.58Serine/threonine-protein kinase Nek7-like n=6 Tax=... [more]
A0A665X3W7_ECHNA3.200e-6448.11NIMA related kinase 7 n=1 Tax=Echeneis naucrates T... [more]
A0A672GQ60_SALFA4.330e-6447.64Protein kinase domain-containing protein n=63 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:2235718..2239342 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.8
Seed ortholog evalue1.6e-85
Seed eggNOG ortholog2880.D7FMU9
KEGG koko:K08857,ko:K20876
KEGG TC1.I.1.1.3
KEGG Pathwayko04621,map04621
EggNOG free text desc.protein serine/threonine kinase activity
EggNOG OGsKOG0591@1,KOG0591@2759
EC2.7.11.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Exons7
Model size849
Cds size834
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20643.1prot_S-ischiensis_contig9.20643.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 2235733..2239342 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817392.4970615-UTR-S-ischiensis_contig9:2235717..22357321622817392.4970615-UTR-S-ischiensis_contig9:2235717..2235732Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 2235718..2235732 +
1695741079.852318-UTR-S-ischiensis_contig9:2235717..22357321695741079.852318-UTR-S-ischiensis_contig9:2235717..2235732Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 2235718..2235732 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817392.5081434-CDS-S-ischiensis_contig9:2235732..22358741622817392.5081434-CDS-S-ischiensis_contig9:2235732..2235874Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2235733..2235874 +
1695741079.8653302-CDS-S-ischiensis_contig9:2235732..22358741695741079.8653302-CDS-S-ischiensis_contig9:2235732..2235874Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2235733..2235874 +
1622817392.519084-CDS-S-ischiensis_contig9:2236266..22363241622817392.519084-CDS-S-ischiensis_contig9:2236266..2236324Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2236267..2236324 +
1695741079.8763502-CDS-S-ischiensis_contig9:2236266..22363241695741079.8763502-CDS-S-ischiensis_contig9:2236266..2236324Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2236267..2236324 +
1622817392.531028-CDS-S-ischiensis_contig9:2236646..22367781622817392.531028-CDS-S-ischiensis_contig9:2236646..2236778Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2236647..2236778 +
1695741079.890737-CDS-S-ischiensis_contig9:2236646..22367781695741079.890737-CDS-S-ischiensis_contig9:2236646..2236778Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2236647..2236778 +
1622817392.544124-CDS-S-ischiensis_contig9:2237476..22375521622817392.544124-CDS-S-ischiensis_contig9:2237476..2237552Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2237477..2237552 +
1695741079.900409-CDS-S-ischiensis_contig9:2237476..22375521695741079.900409-CDS-S-ischiensis_contig9:2237476..2237552Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2237477..2237552 +
1622817392.5564566-CDS-S-ischiensis_contig9:2238052..22381601622817392.5564566-CDS-S-ischiensis_contig9:2238052..2238160Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2238053..2238160 +
1695741079.9114826-CDS-S-ischiensis_contig9:2238052..22381601695741079.9114826-CDS-S-ischiensis_contig9:2238052..2238160Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2238053..2238160 +
1622817392.568113-CDS-S-ischiensis_contig9:2238749..22388751622817392.568113-CDS-S-ischiensis_contig9:2238749..2238875Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2238750..2238875 +
1695741079.923365-CDS-S-ischiensis_contig9:2238749..22388751695741079.923365-CDS-S-ischiensis_contig9:2238749..2238875Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2238750..2238875 +
1622817392.5798042-CDS-S-ischiensis_contig9:2239150..22393421622817392.5798042-CDS-S-ischiensis_contig9:2239150..2239342Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2239151..2239342 +
1695741079.9327457-CDS-S-ischiensis_contig9:2239150..22393421695741079.9327457-CDS-S-ischiensis_contig9:2239150..2239342Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 2239151..2239342 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20643.1

>prot_S-ischiensis_contig9.20643.1 ID=prot_S-ischiensis_contig9.20643.1|Name=mRNA_S-ischiensis_contig9.20643.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=278bp
MPYESCLKEVGLLRSLQSPNIVSLHSCFLEENILWVVLEWVDGGDLKGVI
SRTKKAKAHMAELTVWGYFLQICNAVLHMHSQRIIHRDLKPANILVCKDG
TVKLADLGLGRYLNVKSVFAFSQVGTPLYMSPETLQGQGYEMPSDIWSLG
CVLYELAMLFSPFAARHLTMSKLFHKIVRAEYMPVDRHLYSARLSNLIDH
LLVADPNCRPRIDMVAPAAHLALCAEQAGVQGLAAEQLAACAGQLGPAGL
SHAGVGVGIVAAAPGGPLAQGWHTHPSE
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mRNA from alignment at S-ischiensis_contig9:2235718..2239342+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20643.1 ID=mRNA_S-ischiensis_contig9.20643.1|Name=mRNA_S-ischiensis_contig9.20643.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3625bp|location=Sequence derived from alignment at S-ischiensis_contig9:2235718..2239342+ (Schizocladia ischiensis KU_0333)
GCGGGGTGCGTGGAGATGCCGTACGAGAGCTGCCTCAAGGAGGTGGGGCT GCTGCGGTCGCTGCAGAGCCCCAACATCGTGTCCCTGCACTCCTGCTTCC TGGAGGAGAACATCCTCTGGGTCGTGCTGGAGTGGGTGGACGGCGGGGAC CTCAAGGGTGAGCCGGCGAGAGCGGAGGGTGGTGGTGGGTGGGGGTGGTT GGGGTGGGGGTGGGGGTTGTGGTTGGTGGTGTTGGTGGTGGTGGTGGTGG TGGTGGTGGGTGGTGGTGGTGGTGGTGGTTGTGGTGGTGGTGGTGGTGGT GGTCGTGGTGGCGGTGATGGTGGTGGTGGTGGTCGTGGCGGCGGTGGCGG CGGCGTGCCGGTGGTGGTGGTAGCGTTCATGGTGGCGGTCATGGTGGTTG TGGCCCTTAGAACGTGCCTAAACCCCCAACCACGGCACAGCGTTTGTTTG AATCACGGCCCAAACAAGACATGGATGCGCGATGAACACCCTGACTAAGT ACGTATGCCAATGGATGCGGACGGCCTTGGTTTTGCTCGTGTGCGGCAGG CGTCATCTCGCGGACCAAGAAGGCGAAGGCGCACATGGCCGAGCTCACGG TGTGGGGGTGAGTGATTTGTGCGGTTTGTGTGTGTGCGCGCCCAGGGGAG GGAGAGGGATAGGGAGAGGGAGGGGGAGGGAGTGTGTGAGAGAGAGAGAG AGGGAGGGAGAGGGTGTAGAGAGAGAGGGGGGGAGAGGGAGGGGGAGGGA GGGAGAGGGAGGGAGGGAGGGAGGGAGGAGGGAGGGAGAGGGAGAGGGAG AGAGAGCAGGCCTCGGTGGGAACAGTCTTGTGACGACAGGTCTTGCGACG ACGATTCCTCTTTTGTCTTTTGTCTTTTGTCATGACGCACGGGCACGCTG CTGACGCCCCCTCCCCCTTCTTTCCCCAGGTACTTTTTACAGATCTGCAA CGCCGTCCTGCACATGCACAGCCAGCGCATCATCCACCGGGACCTCAAGC CTGCCAACATCCTCGTCTGCAAGGACGGCACCGTGAAACTCGCCGATTTG GGGCTGGGACGGTGCGTGCGTGTGTGTGTGTGCGTGCGTGCGGGCGTGCA TGTGTGCGTTCGTGCGTGTGTGCACGCGTGCATGTGTGCACGCGTGCGTG TGTGTGTGCGTGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTGTGTTTGTG TGCGTGTGTGCGTTGGTGTATTGGTTTGTCTCTATGTTTGTGTCGACTTC TCCCCCCTTCCACCCACCGAACAGCCGTGACAAACACCACCTCGCCTTCG CACTCTGCTTCCCCTTCTCCGTAGTCGTCGGAGAGATCTTGTCCCGCCAT GCCAATTTGCGGGAGAACTTTGCTCGCCGAATACTGGTCGGATTCGCGCA GGAAAACTCGGAAAATCTCCCTCAGGACCTGGTGGAACTTTTTCAAGGGC TCTCGGGACAACCCAGGACCTTGCCGGCGAGAAACATTCCCCCGAAAATA TTTGCCGTGGGGGAAAAATCTCTCCGACGATTACGGTACCCCCCCCTTCC CCCCACCGAACAGCCGTGACAAACACCACCTCGCCTTTGCCCTGACCCAG CCCCCCGCTTCCCCTTCTCCTTGCCCCCCACCCGCTATTGCTCGGTGTTG CCGGCCCTTGTTTTTTCCTGAACATGTGCTACCCCCACTGGGTGTGGGCG GGTGGGCCCCGTGCGCCATTGACGGCGGCTGCGACCGCTTACGGGCGGTG ATTCCTCAGGTACCTGAACGTGAAGAGCGTGTTCGCTTTCTCGCAGGTGG GAACTCCCCTGTACATGTCCCCCGAGACCCTGCAGGTGAGGCTGGGGCGG GGGGCGGGGCCGGGGGTGGGGGTGGGGGTGGGTCCGGAGGGTGTCGGGCT GGGCATGAGGGAAGTGTCCCGCCCTAGCCCGTTTGCGGACCACGGGGCAC CGGGAAATGTGATGTGATGTGATGTGATGTCACAAACGGTTGTGTGGCAC CTCGTTAAGATTCTATTCGGATCGCTGCGTTGCTCGGCTTGTCAGGCGTA TTCGGCGCTGCACATACAGTATGTACGAGTACTTGAGTACCGTATTGGCA AGAAGGATCGTCTTACTGCACACGCAGACTGTATATTTGTACAGTTACGA GTACGTTCGTGCTGTACTGCTGCTGGCATCCTTGCAAGCGCAACGGACGT ACAGCTTAACCCCCCCCCCCAACCCACCCACCCACCGCCACCTCACCTCC TTCTCCTCCTCCTCCTCCCCGCTCCCCGTGCGCCTGTCTGTGGCCCTGCT CCTCTCATGCCGGGAATTACTCTACCCCCCTTCAGGGCCAGGGTTACGAG ATGCCCTCGGACATCTGGTCCCTGGGGTGCGTGCTGTACGAGCTGGCCAT GCTGTTCTCGCCCTTTGCGGCCAGGCACCTCACCATGAGCAAGGTGTGTT TGGAGACGTCATTTCGAAATGCCCAAGTAGTTTGGAGACGTCGTTTCGAA ACGCCCAAGTAGTTCAGAGACGTCATTTCGAAAATATGCTCAAGTAGTTT GGAGACGTTGTGTCGAAACGCCCAAATAGTTTGAGACGTCGTTTCGAAAT GCCCAAGTAGTTTGGAGACGTCGTGTCGAAATGCTCAAGCAGTTTGGAGA CGTCGTTTCGAAATGCCGAAGTAGTTTGGAGACGTCGTTTCGAACCGCCC AAGTAGTTTGGAGACGCCGTTTCGAGATGCCCTCCGACATCTGGTCCCTT GGGTGCGTGCTGTACGAGCTGGCCATGCTGTCCTCGCCCTTTGCGACCAG GCACCTCACCATGAGCAAGGTGTGTGTGCGTGTCCGTGTCGCCTTGGTGG TGGTTGGCAGCGGTGGCGGCGGTGGCGGCGGTGCACAGTGCAGGCGGGCC CCGCTCGGACCCTGGCCCAGCCTGAGTGGAACCCGTACAGCACAGCGAAA CGCCTGAGACACCCCCCCCCCCCTCCCGCCCCTGCCCCTGCCCCCCCCGC CCCCCCGTTCCCCTCACCCACCCCCTCGGCAGCTCTTCCACAAGATTGTG CGCGCCGAGTACATGCCGGTGGATCGGCACCTGTACAGCGCACGCCTGAG CAACCTCATAGACCACCTCCTCGTGGCGGACCCCAACTGCCGTCCCAGGA TAGACATGGTGCGTCCGAGTCTGAAGACTCAGGGCTGACGCCACGAACTG AGTTTTTTCTTTGTTTTTGTGCTTTTGTCTGCCCTGCGAGTGAAGGCGAA TGAAAGGAAGGGCTTCTGGGGGTGGGGCCCTGAACTCACGCAAGTAGGGA CACCTCTTCTTTCCCACTCGCTCGTTTGTCTTCTTGCAAGAAACTGCCAA GTACCACCCGTGCTCCTCGTCGATCCATACGTCCGGCCTAACTCAACCGC AACCACCCCCCCCCCCAAAAAAAAATGTCGCAGGTGGCGCCGGCAGCCCA CCTGGCCCTCTGCGCAGAGCAGGCAGGCGTGCAGGGCCTGGCCGCGGAGC AGCTCGCGGCCTGCGCCGGCCAGCTCGGCCCCGCCGGCCTCTCGCACGCG GGGGTGGGCGTGGGCATCGTGGCCGCAGCGCCGGGGGGGCCGCTCGCGCA GGGCTGGCACACGCATCCGTCGGAG
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:2235718..2239342+

>mRNA_S-ischiensis_contig9.20643.1 ID=mRNA_S-ischiensis_contig9.20643.1|Name=mRNA_S-ischiensis_contig9.20643.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1668bp|location=Sequence derived from alignment at S-ischiensis_contig9:2235718..2239342+ (Schizocladia ischiensis KU_0333)
ATGCCGTACGAGAGCTGCCTCAAGGAGGTGGGGCTGCTGCGGTCGCTGCA
GAGCCCCAACATCGTGTCCCTGCACTCCTGCTTCCTGGAGGAGAACATCC
TCTGGGTCGTGCTGGAGTGGGTGGACGGCGGGGACCTCAAGGATGCCGTA
CGAGAGCTGCCTCAAGGAGGTGGGGCTGCTGCGGTCGCTGCAGAGCCCCA
ACATCGTGTCCCTGCACTCCTGCTTCCTGGAGGAGAACATCCTCTGGGTC
GTGCTGGAGTGGGTGGACGGCGGGGACCTCAAGGGCGTCATCTCGCGGAC
CAAGAAGGCGAAGGCGCACATGGCCGAGCTCACGGTGTGGGGGCGTCATC
TCGCGGACCAAGAAGGCGAAGGCGCACATGGCCGAGCTCACGGTGTGGGG
GTACTTTTTACAGATCTGCAACGCCGTCCTGCACATGCACAGCCAGCGCA
TCATCCACCGGGACCTCAAGCCTGCCAACATCCTCGTCTGCAAGGACGGC
ACCGTGAAACTCGCCGATTTGGGGCTGGGACGGTACTTTTTACAGATCTG
CAACGCCGTCCTGCACATGCACAGCCAGCGCATCATCCACCGGGACCTCA
AGCCTGCCAACATCCTCGTCTGCAAGGACGGCACCGTGAAACTCGCCGAT
TTGGGGCTGGGACGGTACCTGAACGTGAAGAGCGTGTTCGCTTTCTCGCA
GGTGGGAACTCCCCTGTACATGTCCCCCGAGACCCTGCAGGTACCTGAAC
GTGAAGAGCGTGTTCGCTTTCTCGCAGGTGGGAACTCCCCTGTACATGTC
CCCCGAGACCCTGCAGGGCCAGGGTTACGAGATGCCCTCGGACATCTGGT
CCCTGGGGTGCGTGCTGTACGAGCTGGCCATGCTGTTCTCGCCCTTTGCG
GCCAGGCACCTCACCATGAGCAAGGGCCAGGGTTACGAGATGCCCTCGGA
CATCTGGTCCCTGGGGTGCGTGCTGTACGAGCTGGCCATGCTGTTCTCGC
CCTTTGCGGCCAGGCACCTCACCATGAGCAAGCTCTTCCACAAGATTGTG
CGCGCCGAGTACATGCCGGTGGATCGGCACCTGTACAGCGCACGCCTGAG
CAACCTCATAGACCACCTCCTCGTGGCGGACCCCAACTGCCGTCCCAGGA
TAGACATGCTCTTCCACAAGATTGTGCGCGCCGAGTACATGCCGGTGGAT
CGGCACCTGTACAGCGCACGCCTGAGCAACCTCATAGACCACCTCCTCGT
GGCGGACCCCAACTGCCGTCCCAGGATAGACATGGTGGCGCCGGCAGCCC
ACCTGGCCCTCTGCGCAGAGCAGGCAGGCGTGCAGGGCCTGGCCGCGGAG
CAGCTCGCGGCCTGCGCCGGCCAGCTCGGCCCCGCCGGCCTCTCGCACGC
GGGGGTGGGCGTGGGCATCGTGGCCGCAGCGCCGGGGGGGCCGCTCGCGC
AGGGCTGGCACACGCATCCGTCGGAGGTGGCGCCGGCAGCCCACCTGGCC
CTCTGCGCAGAGCAGGCAGGCGTGCAGGGCCTGGCCGCGGAGCAGCTCGC
GGCCTGCGCCGGCCAGCTCGGCCCCGCCGGCCTCTCGCACGCGGGGGTGG
GCGTGGGCATCGTGGCCGCAGCGCCGGGGGGGCCGCTCGCGCAGGGCTGG
CACACGCATCCGTCGGAG
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