mRNA_S-ischiensis_contig9.20620.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A6H5KGL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGL2_9PHAE) HSP 1 Score: 223 bits (569), Expect = 3.390e-63 Identity = 119/191 (62.30%), Postives = 145/191 (75.92%), Query Frame = 1
Query: 40 RVLWMVPQEQRGMLPAAL-----PRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPL---PKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLAALLLVAVTGYA 588
R+LW++P++QR L +AL P +FR+K LG G PHL ILAHPAV+AV+SHCGMGAAQE+L+FGKP+LCLPM DQ DVT RV+DAGAGL L P GN S+ DVR+AV+ ++ D +F +A + G+LRRAGGTL AADVVEGTLQLGG HL+PPELR PWH+ D Y LLA L+LVAV GYA
Sbjct: 613 RILWVLPKDQREQLLSALLPMPPPPSFRLKVLG--GLPHLGILAHPAVKAVVSHCGMGAAQEALLFGKPVLCLPMLADQEDVTRRVIDAGAGLGLSGLPTGNISSGDVREAVADIVSDPSFGGSAAVLSGVLRRAGGTLRAADVVEGTLQLGGSSHLHPPELRGPWHEASSTDAYVFLLAGLVLVAVLGYA 801
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A485KD89_9STRA (Aste57867_4673 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KD89_9STRA) HSP 1 Score: 184 bits (466), Expect = 1.620e-50 Identity = 96/172 (55.81%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 40 RVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
RVLWM+P +QR LP LP TFR+K +G P HLK+LAHP+V+ VISHCGM +AQE+LVFGKP+LCLP DQPDV RVVDAGAGL L K +FSA +VR LL + T++ NA VG LR AGG D++E TL+ G HL +L+ PWH+VV DV+ V A
Sbjct: 360 RVLWMLPNDQRSSLPPTLPPTFRIKVMGASFP-HLKVLAHPSVKLVISHCGMVSAQEALVFGKPVLCLPFLVDQPDVAARVVDAGAGLMLDKTHFSAEEVRQKAHFLLRNETYARNAARVGAALRSAGGINRVVDIIESTLKYGSA-HLATVDLKLPWHKVVMLDVWAVYAA 529
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A024TBU4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TBU4_9STRA) HSP 1 Score: 182 bits (461), Expect = 9.590e-50 Identity = 95/172 (55.23%), Postives = 121/172 (70.35%), Query Frame = 1
Query: 40 RVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
RVLW +P +QRG+LP ALP TFR+K + P HL+++AHP+V+ VISHCGM +AQESLVFGKP+LCLP DQPDV RVVDAGAGL L K +F+A +VR V LL + +F++NA VG LR AGG +++E TLQ G HL +L+ PWH+VV DV+ V A
Sbjct: 360 RVLWTLPNDQRGVLPQALPPTFRIKVMSSAFP-HLRVIAHPSVKLVISHCGMVSAQESLVFGKPILCLPFLVDQPDVAARVVDAGAGLVLDKTHFTAEEVRQKVLTLLRNASFAQNAVRVGAALRSAGGIKRVTEILESTLQHGT-HHLTTVDLKLPWHKVVMLDVWAVYAA 529
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A6G0XBW6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBW6_9STRA) HSP 1 Score: 179 bits (454), Expect = 8.070e-49 Identity = 94/172 (54.65%), Postives = 118/172 (68.60%), Query Frame = 1
Query: 40 RVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
RVLW +P +QRG LP LP TFR+K +G P HL++LAHPAV+ VISHCGM +AQE+LVFGKP+LCLP DQPDV RVVDAGAGL L K +F++ +VR LL + TF+ NA VG L+ AGG A ++E TL+ G HL +L+ PWH+VV DV+ V A
Sbjct: 355 RVLWTLPNDQRGALPQTLPPTFRIKVMGSSFP-HLRVLAHPAVKLVISHCGMVSAQEALVFGKPVLCLPFLVDQPDVAARVVDAGAGLMLDKTHFTSEEVRQKALLLLRNSTFAANAAKVGAALQSAGGIRRAVAIIESTLKYGS-HHLGTVDLKLPWHKVVMLDVWAVYAA 524
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A3R6VK13_9STRA (HTH CENPB-type domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6VK13_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.840e-48 Identity = 95/172 (55.23%), Postives = 121/172 (70.35%), Query Frame = 1
Query: 40 RVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
RVLW +P +QRG+LP ALP TFR+K + P HL+++AHP+V+ VISHCGM +AQESLVFGKP+LCLP DQPDV RVVDAGAGL L K +F+A +VR V LL + +F++NA VG LR AGG +++E TLQ G HL +L+ PWH+VV DV+ V A
Sbjct: 301 RVLWTLPNDQRGVLPQALPPTFRIKVMSSAFP-HLRVIAHPSVKLVISHCGMVSAQESLVFGKPILCLPFLVDQPDVAARVVDAGAGLVLDKTHFTAEEVRQKVLTLLRNASFAQNAVRVGAALRSAGGIKRVTEILESTLQHGT-HHLTTVDLKLPWHKVVMLDVWAVYAA 470
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A397F9P9_9STRA (HTH CENPB-type domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F9P9_9STRA) HSP 1 Score: 177 bits (450), Expect = 5.480e-47 Identity = 93/172 (54.07%), Postives = 117/172 (68.02%), Query Frame = 1
Query: 40 RVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
RVLW +P +QRG LP ALP TFR+K + P HL++LAH +V+ VISHCGM +AQE+LVFGKP+LCLP DQPDV RVVDAGAGL L K +F+A +VR LL + +++ NA VG LR AGG D++ TLQ G HL P +L+ PWH+VV DV+ V A
Sbjct: 351 RVLWTLPNDQRGALPQALPPTFRIKVMSSTFP-HLRLLAHSSVKLVISHCGMVSAQEALVFGKPILCLPFLVDQPDVAARVVDAGAGLVLDKTHFTAEEVRQKALVLLRNASYARNAARVGAALRSAGGIERVTDIIASTLQFGT-HHLTPVDLKLPWHKVVMLDVWAVYAA 520
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A1V9ZKP0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKP0_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.180e-45 Identity = 90/176 (51.14%), Postives = 118/176 (67.05%), Query Frame = 1
Query: 28 GSEVRVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
G+ V VLW +P +QR +LP+ LP +FR+K LG G P HLK+LA PAV+ VISHCGM +AQE+L+FGKP+LCLP DQPDV RVVDAGAGL L K +F+ +VR L+ + +++ A VG L+ AGG ++VE TL+ G HL +L PWH+VV DV+ V A
Sbjct: 332 GAAVNVLWTLPNDQRHVLPSTLPPSFRIKVLGSGFP-HLKVLAQPAVKLVISHCGMVSAQEALIFGKPVLCLPFLVDQPDVAARVVDAGAGLLLDKSHFTPEEVRHKALELIRNASYATAAARVGAALKDAGGIARVLEIVESTLRFGHS-HLTTVDLLLPWHKVVMLDVWAVYAA 505
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A067C9X2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C9X2_SAPPC) HSP 1 Score: 168 bits (426), Expect = 5.500e-45 Identity = 91/176 (51.70%), Postives = 116/176 (65.91%), Query Frame = 1
Query: 28 GSEVRVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
G+ VLW +P +QR +LP+ LP +FR+K LG G P HLK+LAHPAV+ VISHCGM +AQE+LVFGKP+LCLP DQPDV RVVDAGAGL L K +F+ +V L+ + +++ A VG L+ AGG +VE TLQ G HL +L PWH+VV DV+ V A
Sbjct: 336 GATFNVLWTLPNDQRHVLPSHLPPSFRIKVLGSGFP-HLKVLAHPAVKLVISHCGMVSAQEALVFGKPVLCLPFVVDQPDVAARVVDAGAGLVLDKSHFTPDEVHHKARELIQNASYAAAAVRVGAALKEAGGINRVLTIVESTLQFGHA-HLTTVDLLLPWHKVVMLDVWAVYAA 509
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: A0A1V9YXK0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YXK0_9STRA) HSP 1 Score: 168 bits (425), Expect = 8.470e-45 Identity = 88/171 (51.46%), Postives = 117/171 (68.42%), Query Frame = 1
Query: 43 VLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLA 555
VLW +P +QR +LP LP+ FR+K LG G P HLK+LA P+V+ VISHCGM +AQE+L+FGKP+LCLP DQPDV RV+DAGAGL L K F+A +VR L+ + +++ +A+ VG L+ AGG ++VEGTL+ G HL +L PWH+VV DV+ V A
Sbjct: 355 VLWTLPNDQRHVLPPNLPQAFRIKVLGSGFP-HLKVLAQPSVKLVISHCGMVSAQEALMFGKPILCLPFLVDQPDVAARVIDAGAGLMLDKTYFTAEEVRSKAMELITNVSYTRSAKRVGSALKDAGGIDRVLEIVEGTLRFGN-NHLKTVDLYLPWHKVVMLDVWAVYAA 523
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Match: D0N6P1_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N6P1_PHYIT) HSP 1 Score: 160 bits (404), Expect = 1.780e-44 Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 31 SEVRVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPP-----HLKILAHPAVRAVISHCGMGAAQESLVFGKPLLCLPMFGDQPDVTVRVVDAGAGLPLPKGNFSALDVRDAVSALLHDRTFSENARAVGGILRRAGGTLLAADVVEGTLQLGGGRHLYPPELRAPWHQVVGADVYGVLLAALLLVAV 576
S V+VLW++P +QRG LP ALP + VK PP +L+IL+HPAVR V+SHCGM +AQE+LV GKPLLC+P DQPDV RV D+GAG+ L K S V AVS LL + +++ AR VG +L RAGGT A DV++ L+LG HL L APWH+ DV+ V A + L+AV
Sbjct: 23 SPVKVLWVLPTDQRGNLPPALPPSLVVK------PPSSSLSNLEILSHPAVRLVVSHCGMVSAQEALVMGKPLLCIPFLVDQPDVAARVEDSGAGIALDKNLLSGPYVHAAVSELLTNSSYTNAARRVGSLLERAGGTTRAIDVIDAALRLGFD-HLATLNLTAPWHKTALLDVWAVYAALICLLAV 202 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20620.1 >prot_S-ischiensis_contig9.20620.1 ID=prot_S-ischiensis_contig9.20620.1|Name=mRNA_S-ischiensis_contig9.20620.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=267bp QCRARGAWTGSEVRVLWMVPQEQRGMLPAALPRTFRVKTLGPGGPPHLKIback to top mRNA from alignment at S-ischiensis_contig9:2000402..2006955+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20620.1 ID=mRNA_S-ischiensis_contig9.20620.1|Name=mRNA_S-ischiensis_contig9.20620.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=6554bp|location=Sequence derived from alignment at S-ischiensis_contig9:2000402..2006955+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:2000402..2006955+ >mRNA_S-ischiensis_contig9.20620.1 ID=mRNA_S-ischiensis_contig9.20620.1|Name=mRNA_S-ischiensis_contig9.20620.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1602bp|location=Sequence derived from alignment at S-ischiensis_contig9:2000402..2006955+ (Schizocladia ischiensis KU_0333)back to top |