mRNA_S-ischiensis_contig9.20606.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20606.1
Unique NamemRNA_S-ischiensis_contig9.20606.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: A0A7S3A3L7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3L7_9RHOD)

HSP 1 Score: 236 bits (601), Expect = 1.200e-70
Identity = 109/192 (56.77%), Postives = 145/192 (75.52%), Query Frame = 1 
Query:  121 LNLVLFMGSARPGRLCQRVTTFVAKTLEDRGHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANV 696
            L L++F+GS RP R+C RV+++V ++LE RGH V+V+DPVE +LP+L  P F YP    P+ L  + +KI+AA+GYV+VSPEYNH+  PA+ NT+SHFGGS YA+K S+IVTYS GQ+ G+RAAMSLRPFLSELGCLPVS+I +     ++F  DG+    +D ++W  YA K +GQLEWVG AFKNH+  V
Sbjct:   67 LKLLVFLGSTRPNRMCTRVSSYVVRSLEQRGHQVEVVDPVELDLPLLRQPVFAYPAGKAPKVLLELEDKIKAADGYVIVSPEYNHSFSPAIGNTLSHFGGSCYAFKVSSIVTYSIGQFAGIRAAMSLRPFLSELGCLPVSSIFSVAKVGEVFNADGSFKDGQDEKRWDGYAAKCFGQLEWVGSAFKNHRQLV 258
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: A0A7S3A256_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A256_9RHOD)

HSP 1 Score: 200 bits (509), Expect = 2.750e-58
Identity = 94/165 (56.97%), Postives = 121/165 (73.33%), Query Frame = 1 
Query:  202 EDRGHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANV 696
            + RGH V+ +DPVE  LP+L  P F YP    P+ L  + +KI+AA+GYV+VSPEYNH+  PA+ NT+SHFGGS YA+K S+IVTYS GQ+ G+RAAMSLRPFLSELGCLPVS+I +     ++F  DG+    +D ++W  YA K +GQLEWVG AFKNH+  V
Sbjct:    1 KQRGHQVEFVDPVELALPLLRQPVFAYPAGKAPKVLLELEDKIKAADGYVIVSPEYNHSFSPAIGNTLSHFGGSCYAFKVSSIVTYSIGQFAGIRAAMSLRPFLSELGCLPVSSIFSVAKVGEVFNADGSFKDGQDEKRWDGYAAKCFGQLEWVGSAFKNHRQLV 165
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: UPI001CD46551 (NAD(P)H-dependent oxidoreductase n=1 Tax=Novosphingobium sp. c1 TaxID=2871811 RepID=UPI001CD46551)

HSP 1 Score: 197 bits (501), Expect = 1.360e-56
Identity = 100/213 (46.95%), Postives = 136/213 (63.85%), Query Frame = 1 
Query:  121 LNLVLFMGSAR------PGRLCQRVTTFVAKTLEDRGHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANVGIPS*SEARVVGPTQ 741
            LN ++F+GS R      P RL  RV    A  L   GH+ ++IDP+  +LPV   PHF Y   + P  L  + EKI AA+GYV++SPEYNHA+ PAL + ++HFG S ++YKPSAIVTYS GQWGG RAA+ +R FLSELGCLPVSA++  P A ++ AE G  ++  D + W  Y  ++  QLEW   A +  +A VG+P+ + A    P+Q
Sbjct:    7 LNFLVFLGSVRDSAPPRPIRLGLRVARQFAARLNASGHSAELIDPLSLDLPVAFKPHFAYAEGAAPAGLARLAEKIAAADGYVMISPEYNHAMSPALAHLLNHFGSSLFSYKPSAIVTYSAGQWGGARAAVGMRTFLSELGCLPVSAMIHIPKAQEVLAESGNFDADADAQAWQMYFDRTMAQLEWWAAAARAQRAAVGLPAAAPAFQRDPSQ 219
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: A0A139DMV9_9GAMM (NADPH-dependent FMN reductase n=1 Tax=Marinobacter sp. T13-3 TaxID=1794906 RepID=A0A139DMV9_9GAMM)

HSP 1 Score: 195 bits (496), Expect = 6.530e-56
Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 1 
Query:  121 LNLVLFMGSAR------PGRLCQRVTTFVAKTLEDR--GHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANV 696
            + L++F+G+ R      P RL  RV   V + L  R   H +++IDP++  L  +  PHF Y     PEPL  + EKI  A+GYV+VSPEYNH++ PAL N ++HFG S ++YKPSAIVTYS GQWGGMRAA+ +R FLSELGCLPVSA++  P A ++F E+G   + ED E W  Y  ++  QL W G A ++H+  V
Sbjct:    1 MKLLVFLGTVRESTPPRPARLGVRVARAVLECLRQRYPDHDIELIDPLDYPLDAVFKPHFAYAKSRAPEPLNALSEKIENADGYVMVSPEYNHSMSPALANLLNHFGSSLFSYKPSAIVTYSAGQWGGMRAAVGMRTFLSELGCLPVSAMIHVPRAQEVFNEEGALEAGEDQEAWFDYFGRTLSQLVWWGEAARSHREQV 200
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: A0A5R8MKB2_9GAMM (NAD(P)H-dependent oxidoreductase n=1 Tax=Halomonas urmiana TaxID=490901 RepID=A0A5R8MKB2_9GAMM)

HSP 1 Score: 194 bits (493), Expect = 1.810e-55
Identity = 100/199 (50.25%), Postives = 131/199 (65.83%), Query Frame = 1 
Query:  130 VLFMGSAR------PGRLCQRVTTFVAKTLEDRGHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANVGIPS 708
            ++F+G+ R      P RL  RV     + LED G TV++IDP++ +L  +  PHF YP   VPE L  + EKI AA+GYV+VSPEYNH++ PAL + ++HFG S YA+KPSAIVTYS GQWGG RAA++LR FL+ELGCLPVSA++  P A +   EDG     ED E+W  Y  ++ GQL W   A   H+ N+  PS
Sbjct:    5 LVFLGTVRDSTPPAPARLGLRVARACVQLLEDDGATVELIDPLDVDLGEIFKPHFAYPKSKVPEVLDALAEKIAAADGYVMVSPEYNHSMSPALAHLLNHFGSSLYAFKPSAIVTYSAGQWGGARAAVNLRTFLAELGCLPVSAMIHMPKAQEALDEDGRFR--EDPERWAGYFGRTLGQLGWWAEAAARHR-NIRAPS 200
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: A0A4R3I3A1_9GAMM (NAD(P)H-dependent FMN reductase n=1 Tax=Reinekea marinisedimentorum TaxID=230495 RepID=A0A4R3I3A1_9GAMM)

HSP 1 Score: 193 bits (490), Expect = 5.000e-55
Identity = 96/200 (48.00%), Postives = 130/200 (65.00%), Query Frame = 1 
Query:  121 LNLVLFMGSAR------PGRLCQRVTTFVAKTLEDR--GHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANV 696
            +N ++F+GSAR      P RL  RV+ F   +L      H  +VID ++  L  +  PHF YP+   P+ L ++ EKI+AA+GY++VSPEYNH + PAL++ ++HFG S +AYKPSAIVTYS GQWGGMRAA+ +R FLSELGCLPVSA++  P A Q+F  +G     ED  +W  Y  ++  QL W   A K H+A V
Sbjct:    1 MNFLIFLGSARESTPPKPARLGARVSEFTLNSLNALYPEHQAEVIDVLDYPLDAVFKPHFAYPSGKAPQALNSLAEKIKAADGYLMVSPEYNHTMSPALSHLLNHFGSSLFAYKPSAIVTYSAGQWGGMRAAIGMRSFLSELGCLPVSAMIHVPKAQQVFTAEGEVQPEEDESRWQDYFGRTLSQLIWWAQATKEHRAQV 200
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: UPI0017478E7D (NAD(P)H-dependent oxidoreductase n=1 Tax=Halomonas sp. ML-15 TaxID=2773305 RepID=UPI0017478E7D)

HSP 1 Score: 192 bits (488), Expect = 8.980e-55
Identity = 98/195 (50.26%), Postives = 129/195 (66.15%), Query Frame = 1 
Query:  124 NLVLFMGSAR------PGRLCQRVTTFVAKTLEDRGHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKA 690
            NL++F+GSAR      P RL  RV       LE  G +V++IDP++ +L  +  PHF Y    VPEPL  +  KI AA+GYV+VSPEYNHA+ PAL + ++HFG S +A+KPSAIVTYS GQWGG RAA+ +R FLSELGCLPVSA++  P A ++  E+G     ED E+W+ Y  ++ GQL W   A   H+A
Sbjct:    3 NLLVFLGSARDSTPPSPARLGLRVARACVGLLEANGASVELIDPLDIDLGCIFKPHFSYSKSQVPEPLDALATKIAAADGYVMVSPEYNHAMSPALAHLLNHFGSSNFAFKPSAIVTYSAGQWGGARAAVGMRTFLSELGCLPVSAMIHVPKAQEVLEENG--RFVEDAERWSDYFGRTLGQLGWWAEACAQHRA 195
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: A0A7Y0WTN4_9GAMM (NAD(P)H-dependent oxidoreductase n=1 Tax=Marinobacter orientalis TaxID=1928859 RepID=A0A7Y0WTN4_9GAMM)

HSP 1 Score: 190 bits (482), Expect = 7.530e-54
Identity = 93/200 (46.50%), Postives = 131/200 (65.50%), Query Frame = 1 
Query:  121 LNLVLFMGSAR------PGRLCQRVTTFVAKTLEDR--GHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANV 696
            +  ++F+G+ R      P RL  RVT  V + L+ R  GH V+++D ++     +  PHF YP    P  L  + EKI +A+G+V++SPEYNH++ PAL N ++HFG S ++YKPSAIVTYS GQWGGMRAA+ LR FLSELGCLPVSA++  P A ++FA DG+  + ED + W  Y  +++ QL W   A K ++A V
Sbjct:    1 MKFLVFLGTVRDSTPPKPARLGVRVTEAVLECLKSRYAGHEVELVDALDYPPEAVFKPHFAYPRSKAPAELNQLAEKIESADGFVMISPEYNHSMSPALANLLNHFGSSLFSYKPSAIVTYSAGQWGGMRAAVGLRTFLSELGCLPVSAMIHVPRAQEVFAADGSPEAGEDKDSWFAYFGRTFNQLIWWAQAAKEYRAQV 200
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: A0A2M8QRX1_9SPHN (NADPH-dependent oxidoreductase n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2M8QRX1_9SPHN)

HSP 1 Score: 189 bits (480), Expect = 1.440e-53
Identity = 94/199 (47.24%), Postives = 126/199 (63.32%), Query Frame = 1 
Query:  130 VLFMGSAR------PGRLCQRVTTFVAKTLEDRGHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANVGIPS 708
            ++F+GS R      P RL  RV     K L++ GH V++IDP+   LP    PHF Y   +VPE L  +  KI AA+G+V+VSPEYNH++ PAL + ++HFG S ++YKPSAIVTYS GQWGG RAA+++R FLSELGCLPVSA++  P A  +  E G      D E W  Y  ++  QL+W   A +  +A  GIP+
Sbjct:    5 LVFLGSVRDSTPPRPARLGLRVAWQCEKHLQEMGHAVELIDPLSIELPAAFKPHFAYAKSAVPEALDALAAKIEAADGFVMVSPEYNHSMSPALAHLLNHFGSSLFSYKPSAIVTYSAGQWGGARAAVNMRTFLSELGCLPVSAMIHLPQAQDILTETGDFAEGIDAEAWQGYFGRTLAQLDWWAAAARAQRAVEGIPA 203
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BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Match: UPI000D322D16 (NAD(P)H-dependent oxidoreductase n=1 Tax=Oceanimonas marisflavi TaxID=2059724 RepID=UPI000D322D16)

HSP 1 Score: 189 bits (480), Expect = 1.480e-53
Identity = 93/200 (46.50%), Postives = 130/200 (65.00%), Query Frame = 1 
Query:  121 LNLVLFMGSAR------PGRLCQRVTTFVAKTLEDR--GHTVQVIDPVEANLPVLETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMSHFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFPHASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANV 696
            + L++F+GS R      P RL +RV       L+     H V++ID ++  L  +  PHF Y +   PEPL  + EKI AA+G+++VSPEYNH++ PAL N ++HFG S ++YKPSAIVTYS GQWGGMRAA+ +R FLSELGCLPVSA++  P A ++FA +G   + ED + W+ Y  +++ QL W   A   H+A V
Sbjct:    1 MKLLVFLGSVRNSTPPRPARLGERVAKACLACLQGNHGDHQVELIDALDYPLEPMFKPHFAYASGRAPEPLNRLAEKIAAADGFIMVSPEYNHSMSPALANLLNHFGSSLFSYKPSAIVTYSAGQWGGMRAAVGMRTFLSELGCLPVSAMIHVPRAQEVFAANGAVQAGEDEQAWSDYFDRTFNQLLWWARAAGEHRAQV 200
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3A3L7_9RHOD1.200e-7056.77Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A256_9RHOD2.750e-5856.97Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
UPI001CD465511.360e-5646.95NAD(P)H-dependent oxidoreductase n=1 Tax=Novosphin... [more]
A0A139DMV9_9GAMM6.530e-5648.00NADPH-dependent FMN reductase n=1 Tax=Marinobacter... [more]
A0A5R8MKB2_9GAMM1.810e-5550.25NAD(P)H-dependent oxidoreductase n=1 Tax=Halomonas... [more]
A0A4R3I3A1_9GAMM5.000e-5548.00NAD(P)H-dependent FMN reductase n=1 Tax=Reinekea m... [more]
UPI0017478E7D8.980e-5550.26NAD(P)H-dependent oxidoreductase n=1 Tax=Halomonas... [more]
A0A7Y0WTN4_9GAMM7.530e-5446.50NAD(P)H-dependent oxidoreductase n=1 Tax=Marinobac... [more]
A0A2M8QRX1_9SPHN1.440e-5347.24NADPH-dependent oxidoreductase n=3 Tax=Sphingomona... [more]
UPI000D322D161.480e-5346.50NAD(P)H-dependent oxidoreductase n=1 Tax=Oceanimon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1891872..1896520 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score188.3
Seed ortholog evalue3.4e-45
Seed eggNOG ortholog261292.Nit79A3_3126
KEGG rclassRC00126,RC01779,RC02556
KEGG koko:K00299
KEGG ReactionR05706,R07210,R10206
KEGG Pathwayko00740,ko00920,ko01100,map00740,map00920,map01100
EggNOG free text desc.NAD(P)H-dependent FMN reductase
EggNOG OGs1MXQ8@1224,COG0431@1,COG0431@2
EC1.5.1.38
COG Functional cat.E
Best tax levelProteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Hectar predicted targeting categoryother localisation
Exons6
Model size1527
Cds size603
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20606.1prot_S-ischiensis_contig9.20606.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 1892928..1896412 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817389.0796244-UTR-S-ischiensis_contig9:1891871..18921361622817389.0796244-UTR-S-ischiensis_contig9:1891871..1892136Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1891872..1892136 -
1695741077.0710497-UTR-S-ischiensis_contig9:1891871..18921361695741077.0710497-UTR-S-ischiensis_contig9:1891871..1892136Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1891872..1892136 -
1622817389.0907815-UTR-S-ischiensis_contig9:1892376..18929271622817389.0907815-UTR-S-ischiensis_contig9:1892376..1892927Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1892377..1892927 -
1695741077.0878375-UTR-S-ischiensis_contig9:1892376..18929271695741077.0878375-UTR-S-ischiensis_contig9:1892376..1892927Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1892377..1892927 -
1622817389.1613805-UTR-S-ischiensis_contig9:1896412..18965201622817389.1613805-UTR-S-ischiensis_contig9:1896412..1896520Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1896413..1896520 -
1695741077.1427143-UTR-S-ischiensis_contig9:1896412..18965201695741077.1427143-UTR-S-ischiensis_contig9:1896412..1896520Schizocladia ischiensis KU_0333UTRS-ischiensis_contig9 1896413..1896520 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817389.1012754-CDS-S-ischiensis_contig9:1892927..18929511622817389.1012754-CDS-S-ischiensis_contig9:1892927..1892951Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1892928..1892951 -
1695741077.0970836-CDS-S-ischiensis_contig9:1892927..18929511695741077.0970836-CDS-S-ischiensis_contig9:1892927..1892951Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1892928..1892951 -
1622817389.1122487-CDS-S-ischiensis_contig9:1893448..18935651622817389.1122487-CDS-S-ischiensis_contig9:1893448..1893565Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1893449..1893565 -
1695741077.1058545-CDS-S-ischiensis_contig9:1893448..18935651695741077.1058545-CDS-S-ischiensis_contig9:1893448..1893565Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1893449..1893565 -
1622817389.124938-CDS-S-ischiensis_contig9:1894617..18948351622817389.124938-CDS-S-ischiensis_contig9:1894617..1894835Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1894618..1894835 -
1695741077.1153452-CDS-S-ischiensis_contig9:1894617..18948351695741077.1153452-CDS-S-ischiensis_contig9:1894617..1894835Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1894618..1894835 -
1622817389.1387746-CDS-S-ischiensis_contig9:1895154..18952331622817389.1387746-CDS-S-ischiensis_contig9:1895154..1895233Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1895155..1895233 -
1695741077.126152-CDS-S-ischiensis_contig9:1895154..18952331695741077.126152-CDS-S-ischiensis_contig9:1895154..1895233Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1895155..1895233 -
1622817389.1503274-CDS-S-ischiensis_contig9:1896247..18964121622817389.1503274-CDS-S-ischiensis_contig9:1896247..1896412Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1896248..1896412 -
1695741077.1343176-CDS-S-ischiensis_contig9:1896247..18964121695741077.1343176-CDS-S-ischiensis_contig9:1896247..1896412Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1896248..1896412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20606.1

>prot_S-ischiensis_contig9.20606.1 ID=prot_S-ischiensis_contig9.20606.1|Name=mRNA_S-ischiensis_contig9.20606.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=201bp
MSKPLNLVLFMGSARPGRLCQRVTTFVAKTLEDRGHTVQVIDPVEANLPV
LETPHFFYPTDSVPEPLKTMGEKIRAAEGYVVVSPEYNHALPPALTNTMS
HFGGSAYAYKPSAIVTYSPGQWGGMRAAMSLRPFLSELGCLPVSAILAFP
HASQLFAEDGTCNSAEDTEKWTKYAHKSWGQLEWVGHAFKNHKANVGIPS
*
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mRNA from alignment at S-ischiensis_contig9:1891872..1896520-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20606.1 ID=mRNA_S-ischiensis_contig9.20606.1|Name=mRNA_S-ischiensis_contig9.20606.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=4649bp|location=Sequence derived from alignment at S-ischiensis_contig9:1891872..1896520- (Schizocladia ischiensis KU_0333)
GCAGGCGTGCACAGGAATCGATGAACCTCGCGCTCGCTTTGGGGGGGGGG
GTATTCCGCCGCTGCCGAGGACCTCGAGTCCTGTTCTTCTGCGCAGGTTC
CCGCGACGATGTCCAAGCCTTTGAACCTCGTTCTTTTCATGGGCTCAGCG
CGGCCCGGACGCCTTTGCCAGCGCGTAACCACGTTCGTCGCGAAGACCCT
TGAGGACAGAGGCCATACGGTTCAGGTTATCGACCCGGTCGAGGCCAATC
TTCCCGTATTGGAAACGCCTCACGTGAGTGAGGCAGGATCTCTGGCCTAT
TTAACGGCCTTCAAATGTTCGGAACGGCCTGCCACCTTGAACATCATGCG
TGGCTTTTGCTTGCACAAGGCAGTGATAATACCCACAAACCGCCACTTCT
CCAACCGCATCGCAATGGCCGTTAGCGTAACGCCCACACACCTTCACCCC
TGTCACGCAATGTTCCGTTTGGCCCTCGAACATGTTTTCAATATGCGCTC
TGCGTGCAGGGCACTGGAACACAATGGTATATGACTATTGTCTCCCTACC
GCTAAATAGTCATATACCATTGCTGGAACGCACGCTCCACGGGCACACAC
AATCAACATGCAATGTTCCGCTGGGCCCTTCAAAATGGTTTGAAGATAGC
TCTCTGACTCCAGGGCAAGGGAGCACATGCGCGCGCGCACAGACGCACAC
ACACACACACACACACACACACACATGCACGCGCACACACCGCCGCCTTG
GGCGGGCACCAACCCTCCCGATCGTCTCTCCCTCTGCCTCTCTCAACAAC
TTTCTTCCCCCTCCTCTTCCCCTTCCCTCACTCCCGCCATCCAACTCGTC
GCTCCCCTTTCCGTCGACCTCTCGGGCATGGGACGCGCATGGCGCTGCAT
TTTGGCTGCCCCTACCTGTGCATTCCAATGGCCCCTCCTCCGGGTCACGG
CATCGGGGTGTGGCGGTGGACTTGCTCTCTGCTGGGGGGTGACAACGGTC
AACTGTATCCGCGTTTTTTTTTTTTTTTTTTCGTTCAAATCCATCCCCAC
GGCCCGGCCCGTGGTTGGCTGGTTTGACCTGAAACTGTAAAAAATGGGGT
TCCTTTCATTCGAAATCCATCCCCGCGGCCCGGCCCGTGGTTGGCTGGAC
TGACCTGAAACTGTAAAAAAATGGGGTTCCTTCCATTCGAAATCCATCCC
CGCGGCCCGGCCCGTGGTTGGGTGGCTTGACCTGAAACTGTAAAAAAATG
TTTGAAAAATGGGGTCTCCCTTCACGCGGACGTGAAGTTCTTCTACCCAA
CGGACAGCGTCCCCGAGCCCCTCAAGACCATGGGGGAGAAGATCAGGGCC
GCGGAGGGATACGTGGGTGCGTCGCAACTTACTGCGATTGGTACGGTTTG
ATTGTGAGAAAACGGGGGGAACTTTGCTGTGGCTTGTGTTGTATTGTGTT
CCGTTTGTTATGTATCCCGGAGAGTCCATGGCTAAATAGCTACTCCTGCC
GGAGGGCAAACCCGAAGTTTCGACTTAGGGCTGTCGGCATTGCACGCAAG
GTTATGTCGCAGGACAAACTAATGAGTACATATATATCCCGGAACCCGGC
ATTTTTTTGTGATGACAGGCACCCTGAGCCTCCCCCGGGCCTTCCCCCGC
TCCCGCTCCGCTTGCTTTTGTGTGTGGTGGTGCAGTCGTCTCGCCTGAGT
ACAACCACGCCCTGCCGCCCGCCCTCACCAACACGATGAGCCACTTTGGT
GGCAGCGCGTACGCGTACAAGCCGAGCGCTATCGTCACCTACTCCCCGGG
GCAGTGGGGCGGCATGCGGGCGGCCATGTCCCTCCGGCCGTTCCTGAGCG
AGCTCGGGTGTCTCCCAGTGTCGGCAATCCTGGCCTTCCCGCATGCCAGC
CAGGTGTGACACTTTCATGTGTTGTACTGCCACTTTCATGTGTTTGCTTG
GAAGTACCGAAGATCACACCGCGTACTTGTACAAAGTATGTATTACTGCA
TAGTGCTCGAAGTACTGTACTTGTGTGTATATTTTGAAGTAGCAGTATAT
GTGTACTCGTACTACCTTCCCGCACGCCAGCCAGGTGTGACGCTTTCATG
TGTTTGCTTGGAAGTACTTGCTGAACATCATACCGCATACTTGTACCAAG
TATGTGGTACTGCATAGTACTTTGAAGTGTATAGGTCCAAGTATATATGT
CCGTCGCGATCGAGGCGCTATAGTGGTCAATGGTCTCGGGACAACGGCAA
GCACAACGTGAGTACATATATATATATACATAGTTTTGAAGTACTCGTAT
ATATGTACTACAGTAGTGTCCATGGTCTCGAGCCTACGGCAAGCACCACG
TGAGTACGCATACTTCGTATATACTGTCCATGGCTAGATAGCTACTCATG
TCGGAGGGCAAACCCGAAGTTTCGACTTAGGGCTGTCGGCATTGCACGCA
AGGTTATGTCGCAAGACAAGCCAATGAGTACATATATATGCTGCTCCGTC
TCGAACGAGGCGCAGGGTCAATGGTCTCGGGACTACGGCAAGCACCACGT
GAGTACATATATATACTTCCACTTTTGTACTTGCTGTGCCTCCTGGCGTC
GGACACCAGGTCCTCCCCGAACGCCAACCCGGTGACACGTTTGATTGAGT
ACGTTCTTGTCTTTTACAACTTGTAGATATACTTGGAAGTATAGGCGTAT
CGAACCGGCGGGAGGAACTGCTGCACTCTCGAGGTACGGGCCTGGTGTAC
AACATCTCGAAACGACTACTGTAGCTACTACCACCACCACTACTATATAT
ATATGTACTCACGTGGTGCTTGCCGTAGTCCCGAGAGCATTGAGCATGCG
CCTCGGTCGAGACGGAGCAGTACCACTACTACAACTACTACTCAAGTACT
CGAGCACATGTATTTAGTATCTCTCACAACCCGACTTGGATGGCGGTGTC
GGCAGCTGTTTGCGGAGGACGGCACCTGCAACAGCGCCGAGGACACGGAG
AAGTGGACCAAGTACGCGCACAAGTCCTGGGGGCAGCTGGAGTGGGTCGG
CCACGCCTTCAAAAACCACAAGGTGAGCATGTGTGTGCGCGTGTGCGTGT
GCATGTTTTTCTGTGTTTTGTGTTGCGTGCCTCTAGAGCTGCACTAGGTC
TACTGTACTGTGTGCTTTTGCTGCGGGTCAAATGGTCTCTTGGGCTACGG
CCAAGCGTATGGCCAGACCGGTGTACTCGACAGGCTTTGTCAATACCTAG
GTACTTGTACGAGTACTTGGAGGTACGTGCATGCTCACATGACTTCGAGC
AGTTTTCGCATGGAGATAGACAACAAGCGAGTGGGAAAGGAGAGGTGTTC
GAGCAAGTTTTTCTCGAACATATACGATACTGTGCGCAGCTGAGCTGAGT
ATTTCCCTGAACCGGGTCCATCGACTACGAGTACGCCGTATACTTGGTGT
GCCACTGCGAACGGATGATGTCTCAAGCGGTTTTATAGTCATAAACATTT
AACTTTACTTTTATTCACATGCCCCCCATTGCCGGTCCTGCCTGTGCCCC
CACCGTGGCGCCACTGCAGGCCAACGTCGGGATCCCTTCTTGAAGTGAAG
CTCGTGTCGTTGGCCCAACGCAGCTGGGAGTTCACAAGATCCCGGAGGCG
ATGCGGCATACCAAAGCTCCAGCTGGGACTCCTCCTTGACGGGGAAATGG
CTCTCTCTTTACAGCTACATCTGGGAGAACAGGGAGAGGCGGTTTGGCTC
GAGCTAGGAGTTCACAAGAACCCGGAGGCAGTGCAGCAGGCCAAAGCTGA
GACCCCTCCTTGCGGGGTCGGCTCTCTCTTTGCAGTCACGGCTGGGAGAA
CAGGGAGAGGCGGTTTGGCTGGAGCTGGGAGTTCACAAGACTCCGCAGGC
GGTGCGGCAGGCCAAAGCTGGACTCCTCCTTGACCAGGGTTGGCACTTAG
CCCCCAATTGGTGCCCTTTTAGGCCCTTGATTAGGGGTAATTAGGGGTAG
CTAGACCTAAATTGAAGGCTAGTTAGGCCCTAACTAACCTCTAAGTGCCA
ACCCTGTCCTTGACGGGGATCTGCTCTCTCTTTACAGTCACAGCTGGGAG
GACAGGGAGAGGCAAAATCGCCGGCAAGCAATGGTGTATGGAAGGCGGTT
TGGCCGGCACGGCACCAGCTCCCCTGGGGTTGGCACTTATCCCCTAAGTG
GTGCCCTTTAGGCCCTTAATTAAGAGGTAATTAGGGGTAATTAGACCTAT
ATTGAAGGCTAGTTAGGCCCTAACTAACCTCTAAGTGCCAACCCTGTCCT
TGACGGGGATCTGCTCTCTCTTTACAGTCACAGCTGGGAGGACAGGGAGA
GGCAAAATCGCCGGCAAGCAATGGTGTATGGAAGGCGGTTTGGCCGGCAC
GGCACCAGCTCCCCTGGGGTTGGCACTTATCCCCTAAGTGGTGCCCTTTC
AGGCCCTTAATTAAGAGGTAATTAGGGGTAATTAGACCTAAATTGAAGGC
TAATTAACCCCTAGTCAACCTCTAAGTAGGTGCCAAGCCTGCCAGCTTCA
ACTCACGGGTCACCGTGATGTTGTGTGGGGTGATCGCGGCACCAGTCGTC
GTCATGATTAGATGTCCTGACTTGCAGGCCCGTCTGGTGGGGATGGAGG
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:1891872..1896520-

>mRNA_S-ischiensis_contig9.20606.1 ID=mRNA_S-ischiensis_contig9.20606.1|Name=mRNA_S-ischiensis_contig9.20606.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1206bp|location=Sequence derived from alignment at S-ischiensis_contig9:1891872..1896520- (Schizocladia ischiensis KU_0333)
ATGTCCAAGCCTTTGAACCTCGTTCTTTTCATGGGCTCAGCGCGGCCCGG
ACGCCTTTGCCAGCGCGTAACCACGTTCGTCGCGAAGACCCTTGAGGACA
GAGGCCATACGGTTCAGGTTATCGACCCGGTCGAGGCCAATCTTCCCGTA
TTGGAAACGCCTCACATGTCCAAGCCTTTGAACCTCGTTCTTTTCATGGG
CTCAGCGCGGCCCGGACGCCTTTGCCAGCGCGTAACCACGTTCGTCGCGA
AGACCCTTGAGGACAGAGGCCATACGGTTCAGGTTATCGACCCGGTCGAG
GCCAATCTTCCCGTATTGGAAACGCCTCACTTCTTCTACCCAACGGACAG
CGTCCCCGAGCCCCTCAAGACCATGGGGGAGAAGATCAGGGCCGCGGAGG
GATACGTGGTTCTTCTACCCAACGGACAGCGTCCCCGAGCCCCTCAAGAC
CATGGGGGAGAAGATCAGGGCCGCGGAGGGATACGTGGTCGTCTCGCCTG
AGTACAACCACGCCCTGCCGCCCGCCCTCACCAACACGATGAGCCACTTT
GGTGGCAGCGCGTACGCGTACAAGCCGAGCGCTATCGTCACCTACTCCCC
GGGGCAGTGGGGCGGCATGCGGGCGGCCATGTCCCTCCGGCCGTTCCTGA
GCGAGCTCGGGTGTCTCCCAGTGTCGGCAATCCTGGCCTTCCCGCATGCC
AGCCAGTCGTCTCGCCTGAGTACAACCACGCCCTGCCGCCCGCCCTCACC
AACACGATGAGCCACTTTGGTGGCAGCGCGTACGCGTACAAGCCGAGCGC
TATCGTCACCTACTCCCCGGGGCAGTGGGGCGGCATGCGGGCGGCCATGT
CCCTCCGGCCGTTCCTGAGCGAGCTCGGGTGTCTCCCAGTGTCGGCAATC
CTGGCCTTCCCGCATGCCAGCCAGCTGTTTGCGGAGGACGGCACCTGCAA
CAGCGCCGAGGACACGGAGAAGTGGACCAAGTACGCGCACAAGTCCTGGG
GGCAGCTGGAGTGGGTCGGCCACGCCTTCAAAAACCACAAGCTGTTTGCG
GAGGACGGCACCTGCAACAGCGCCGAGGACACGGAGAAGTGGACCAAGTA
CGCGCACAAGTCCTGGGGGCAGCTGGAGTGGGTCGGCCACGCCTTCAAAA
ACCACAAGGCCAACGTCGGGATCCCTTCTTGAGCCAACGTCGGGATCCCT
TCTTGA
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