mRNA_S-ischiensis_contig9.20600.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A836CM13_9STRA (Cytochrome b5 reductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM13_9STRA) HSP 1 Score: 359 bits (921), Expect = 1.240e-116 Identity = 183/348 (52.59%), Postives = 240/348 (68.97%), Query Frame = 2
Query: 38 LPEPVNPLLIWGGLTAAGLTAAAVVARVLLLVGSLGSAMMGSGSNGAPFSRSSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKATRPARVPLPDKEWSVCTLQERTKLNRNTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDADDALPGANSIQM-----AKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
+P PV P+L+ T A A+ ARV L++G+LG A G+ A + + + A+ D RY R GS QAW+D V+ A+ +A P V LP +WSVCTLQER ++ +Y FKLP PA VLPL LGQ++TLCGLD +V VP S R GY +++V+K D L A + + A+LL ++AIGDE+A +PGR+ + YRGPY+PITDVVL+A GLG+VPMLQLV ELLPA ++SV A+VVW+NE EDF LY ++E+AFYK H+KLDVACI+E+D+FGH LA N RV EAVP FRIGTLA VSGP++FV KV+DYL R+GYPD+VII++
Sbjct: 1 MPPPVPPVLVGAATTLLVCLAVALAARVPLVLGALGRAAAGAWGGAAALAARANVGGALGDARYALRLALGSAQAWMDEVHAAFNRAFGPEDVMLPANDWSVCTLQERMRVGNGCVKYRFKLPGPACVLPLELGQELTLCGLDAAGRVASASCVPLSPRAAQGYVDVVVAKPRPPDAPLTAAGAAAVGGADFARLLETLAIGDEVAARPGRAMLQYRGPYAPITDVVLIACGLGVVPMLQLVRELLPARESSVRAASVVWLNEAAEDFALYGELERAFYKYHRKLDVACIIERDLFGHALAGNRRVREAVPAFRIGTLAVVSGPDFFVAKVRDYLVRQGYPDEVIITV 348
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: D7FMW3_ECTSI (Cytochrome b5 reductase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW3_ECTSI) HSP 1 Score: 341 bits (874), Expect = 2.310e-108 Identity = 183/367 (49.86%), Postives = 250/367 (68.12%), Query Frame = 2
Query: 2 SEHLQVTLDRSVLPEPVNPLLIWGGLTAAGLTAAAVVARVLLLVGSLG-SAMMGSGSNGAPFSR-----SSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKATRPARVPLPDKEWSVCTLQERTKL-NRNTRRYMFKLPT-PASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDA---DDALPGANSI-QMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
S L+V+LDRSV+PEPV P ++WG TAA L AV AR+ L+G++G S+ + G+ P + + +L A +RY AR GS +W R + W +A P V LP +WSVCTL E+ + + RY F LP+ P +VLPL LGQ++TLCGLD ++VVQG +VP + R G FE++V K D DD LP S + ++ L ++ +GDE+A KPGR+G+VY G PITD+VLVA G+G+VPM+Q+VNELLP+ +SV +A+VVW+NE EDF LY ++EKAF++NH+KLDV+CI+E+D+FG L AN V A P+F+IGTLAAV+GP++F RKV DYL RRGYP+D II L
Sbjct: 68 SPLLEVSLDRSVMPEPVVPPVMWGTTTAAFLGVVAVTARIPRLLGAVGKSSTVTVGNTLGPVATPAAGVAGKLASAFPGLRYGARVWAGSLGSWASRRSQQWAEAFGPEAVVLPANDWSVCTLLEKVREGDGGLYRYRFGLPSSPDAVLPLELGQELTLCGLDASNQVVQGNYVPLTPRKQRGAFEVVVMKATDGAELDDGLPTTRSNREFSRFLDNLPLGDEIAVKPGRAGLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A6H5KGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP4_9PHAE) HSP 1 Score: 213 bits (541), Expect = 2.070e-62 Identity = 101/178 (56.74%), Postives = 138/178 (77.53%), Query Frame = 2
Query: 539 LVSKDG-DADDALPGANSI-QMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
+ + DG + DD LP S + ++ L ++ +GDE+A KPGR+ +VY G PITD+VLVA G+G+VPM+Q+VNELLP+ +SV +A+VVW+NE EDF LY ++EKAF++NH+KLDV+CI+E+D+FG L AN V A P+F+IGTLAAV+GP++F RKV DYL RRGYP+D IISL
Sbjct: 1 MKATDGAELDDGLPTTRSNREFSRFLDNLPLGDEIAVKPGRARLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIISL 178
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S2A766_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A766_9STRA) HSP 1 Score: 190 bits (482), Expect = 2.480e-50 Identity = 113/276 (40.94%), Postives = 159/276 (57.61%), Query Frame = 2
Query: 272 RVNGAWRKATRPAR----VPLP----DKEWSVCTLQERTKLNRNTR-RYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDADDALPGANSIQMAKLL-GSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDF-VLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
R W K RP VP+P D W VC L+ + + R+ RY F LP VLPL LGQ ITLC LD D +V+G F + + D + +L K+ + + GA+ + A +L G M IGDE+A KPG S + YRG Y P+TD+V VA+G+GIVP+L V +LP+ +SV ++VW+N +DF V ++E+ ++K + KL V+CI E ++ L N + EAVPDF GT+A +SGP F K + YL RGYP+D + L
Sbjct: 195 RATRFWNKV-RPVEKIDAVPMPFHPEDDGWGVCMLRSKEHIGRSPFVRYDFDLPRADYVLPLSLGQTITLCCLDESDNIVEGNFY-TFKEDTGTFSIVLPEKNEEETEYDIGADRAKFAHVLKGEMGIGDEIALKPGVSTLNYRGQYLPVTDIVYVASGVGIVPILDQVKAVLPSGSSSVKGVSLVWINGDGKDFDVAINELEEEYFKYNTKLAVSCIGE-NVRKKALEENEEIEEAVPDFNPGTMAVISGPRAFSEKAKAYLKNRGYPEDCLCVL 467
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S2FHA9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHA9_9STRA) HSP 1 Score: 189 bits (480), Expect = 3.930e-50 Identity = 105/291 (36.08%), Postives = 166/291 (57.04%), Query Frame = 2
Query: 221 VRYEARKVFGSFQAWVDRVNGAWRKATRPARVPLPDKEWSVCTLQERTKLNRN-TRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKD-----GDADDALPGANSIQ--MAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRI-GTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
V + + + G + D V W P R L D EW+ CTL +T + + RY F+L + LGLGQ ++L G+D ++V++ +P++ R + G F++++ + A +L +N+ + ++ +M +G+++A KPG + Y G Y PI DV +A+GLGIVP L L+NELLP+ +SV+TA +VWVNE DFV Y D+E +YK KKLDV+C+L+ D FG +L N + +VPD + G + V+GPE F V L+ + +P+ I+ L
Sbjct: 170 VVHRLKLLKGKGANFADSVRDTWTWVMPPQREQLGDGEWAACTLAGKTPITGSGCTRYSFRLNSARQTFGLGLGQALSLIGIDEANRVLKVHMIPATPRLMAGSFDLILPDEDIETKAQASRSLTASNAEEEGFGAMVQTMELGEQIAAKPGDERLTYDG-YLPIDDVHCIASGLGIVPALGLLNELLPSRASSVETANLVWVNEDEGDFVNYVDMENVWYKFSKKLDVSCVLDNDTFGSELWENEAFIASVPDSYVEGMMIVVAGPENFQLNVAKELAAKDFPEGAIVCL 459
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: B7FWJ3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWJ3_PHATC) HSP 1 Score: 186 bits (471), Expect = 3.680e-49 Identity = 111/286 (38.81%), Postives = 155/286 (54.20%), Query Frame = 2
Query: 251 SFQAWVDRVNGAWRKATRPAR-VPLPDKE-----WSVCTLQERTKLNR-NTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPS--SRRDVPGYFEILVSKDGDADDALP----GANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDV-EKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
+F+ RV W + R +P+P E W +CTL+ + +L + N +Y F LP P VLPL LGQQI++ LD D V QG F S PG F IL ++ GAN ++ K + +GDE+A KPG + YRG Y P+T +V +A G GIVP+L V +LPA +SV + +VVW+NE +DF + ++ EK +YK KKL V+C+++ M L N V AVPDF GT+A ++GP +K +L RGYP D I L
Sbjct: 144 TFRLVSGRVQRVWERFQRVDEGIPMPFDEKANDGWGICTLKSKERLGKSNFMQYTFDLPEPDYVLPLDLGQQISMMCLDDDGDVAQGDFFSYNLSASPKPGSFTILFPTGSHEENTCSIGSSGANFLRALKQ--DVKVGDEIALKPGPIKLSYRGQYLPVTGMVYIACGTGIVPVLDQVRAVLPADSSSVTSVSVVWINEEAKDFDVTAELLEKEYYKYSKKLAVSCVVDNTMQRQSLGDNTEVHAAVPDFTQGTMAVIAGPSDMAKKAIAFLENRGYPRDTICVL 427
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S3KXF0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXF0_9STRA) HSP 1 Score: 183 bits (464), Expect = 3.910e-48 Identity = 107/261 (41.00%), Postives = 154/261 (59.00%), Query Frame = 2
Query: 314 VPLPDKE----WSVCTLQERTKLNR-NTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSR--RDVPGYFEILV-SKDGDADDALPGANSIQMAKLLGS-MAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDF-VLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
+P+P +E W V TL+ R +L + N +Y F+LP P VLPL LGQQ++LC LD + V +G F P S + PG F +LV +K + + L G + +++ + IGDE+A KPG + + YRG Y P+TD++ VA G GIVP+L+ +LP +SV TVVW+NE T+DF VL +EK ++K KL V+CI++ + N + AVPDF+ GT+A ++GP + K YL RGYP D I L
Sbjct: 171 IPMPFEEGNEGWGVSTLRSRKRLGKTNFIQYEFELPEPDYVLPLELGQQVSLCCLDNEGNVARGDFFPFSPTGKTKPGSFSVLVPNKTPEENIVLLGLEAANFCRVVKQELKIGDEVAIKPGDTRLNYRGQYLPVTDILYVACGNGIVPVLEQARAVLPRGSSSVAAVTVVWINEETKDFDVLAEVLEKEYFKYSDKLAVSCIVDSPR-RRDWSDNNEINAAVPDFKQGTMAVLAGPTDLMEKAFYYLEDRGYPSDTICVL 430
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: B8CAB2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAB2_THAPS) HSP 1 Score: 181 bits (459), Expect = 2.790e-47 Identity = 101/257 (39.30%), Postives = 145/257 (56.42%), Query Frame = 2
Query: 314 VPLP---DKEWSVCTLQERTKLNRNTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVP-GYFEILV-SKDGDADDALPGANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRD-VEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRGYPDDVIISL 1066
P+P D W CTL+ + K+ Y F LP +PL LGQQI C L +D VV G F P D G ++V ++D + AL G S + ++L M GDE+A KPG++ + YRG P+TD+V +A+GLGIVP++ V + P +SV +VVW+N+ DF L D +E + K KL V+CI++ D+ + + N V EAVP F GT+A +SGP+ F K + YL R+GYP++ I L
Sbjct: 189 TPMPFEGDGGWGKCTLKSKKKIGNTFTVYEFALPRSDYTVPLALGQQIDFCCLGLEDNVVSGSFYPYDMNDGERGVVRVVVPNQDAKGNAALVGLGSSKFIEVLHEMRQGDEVALKPGKTTLEYRGERVPVTDMVYIASGLGIVPIVDQVKAITPKGTSSVKVTSVVWINDQRSDFDLAMDELESEYTKYSTKLAVSCIMD-DVMKNPMEGNAEVEEAVPYFNAGTMAVISGPKRFSEKAKAYLMRKGYPENCICVL 444
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S3DPS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPS7_9STRA) HSP 1 Score: 176 bits (445), Expect = 7.870e-46 Identity = 99/269 (36.80%), Postives = 151/269 (56.13%), Query Frame = 2
Query: 257 QAWVDRVNGAWRKATRPARVPLPDKE--WSVCTLQERTKLNRNT-RRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDV--PGYFEILVSKDGDADD-------ALPGANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDF-VLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDY 1024
Q ++R + WR + +P D+ W VCTL+ R +L + ++ F+LP P +PL LGQQ++LC LD D V +G F P ++ PG F IL D+ L AN +++ K + IGDE+A PG + Y+G Y P+TD+V VA G GIVP+L + +LP+ +SV + TVVW+N+ T+DF V+ +EK ++K +KL V+CI+ K +AN + A+PDF GT+A ++GP+ + K Y
Sbjct: 124 QGRLERWSEKWRPSPVSEPMPFEDENEGWGVCTLRARKRLGKTQFMQFDFELPQPEYTVPLDLGQQVSLCCLDNDGNVARGNFFPFTKESPAKPGSFSILAPNIDDSSSEETIFRIGLENANFVRVIK--NELKIGDEVALTPGSHRLSYKGQYLPVTDMVYVAYGTGIVPVLDQIRSVLPSGASSVSSVTVVWINDSTQDFDVVAELLEKEYFKYSEKLAVSCIVGKVQDTPDFSANDEINTAIPDFLQGTMAVLAGPKQIIEKATFY 390
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Match: A0A7S1XNN4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNN4_9STRA) HSP 1 Score: 171 bits (433), Expect = 6.760e-44 Identity = 123/379 (32.45%), Postives = 193/379 (50.92%), Query Frame = 2
Query: 5 EHLQVTLDRSVLPE-----PVNPLLIWGGLTAAGLTAAAVVARVLLLV----------------GSLGSAMMGSGSNGAPFSRSSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKATRPARV-PLPDKEWSVCTLQERTKL--NRNTRRYMFKLPTPASVLPLGLGQQITLCGLDRDDKVVQGGFVPSSRRDVPGYFEILVSKDGDADDALPGANSIQMAKLLGSMAIGDEMACKPGRSGMVYRGPYSPITDVVLVATGLGIVPMLQLVNELLPAHDTSVDTATVVWVNEHTEDFVLYRDVEKAFYKNHKKLDVACILEKDMFGHQLAANPRVVEAVPDFRIGTLAAVSGPEYFVRKVQDYLSRRG-YPDDVIISL 1066
E L+V+L +SVLP ++ G +AG++AA V +LL V G LG A + S G F ++ +A+ +VR + D + G + A + V PL EW CTL+ + +Y FKL A+ LPL +GQ +T+CGLD DD+VV+ S R GYFE++V D D + ++L ++A GDE+A K G + Y Y P+T VV + GI+P L + ELLP+ + SV+T +VWVN+ DFV+Y +VE+ FYK K++DV+C++++D+ + +N V+++VP + G +A V+G F + +L YP+D I ++
Sbjct: 63 EALKVSLGQSVLPNGAAAGAAGVGVMLGDGVSAGVSAAKVALALLLKVALPLGASAALGLALYSGLLGDAATSAKSAGQGFGATAS--RAISNVR----------EGIADFIEGIF--AGEESMVDPL---EWFACTLESVNPAGDSEGWLKYRFKLKDKAASLPLDIGQGVTICGLDDDDRVVRMDMPLLSPRKARGYFEVVVRSDSDEP----------LLQVLSTLAPGDEIAAKCGPQRLDYTAEYQPVTSVVALVNADGILPALGVAQELLPSKEGSVETFNIVWVNDKEADFVMYDEVERLFYKFPKQMDVSCVIDEDIVSG-IDSNAAVLDSVPRWEPGAMAIVAGDPGFCSSARSFLEAVAEYPNDTICNV 413 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20600.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20600.1 >prot_S-ischiensis_contig9.20600.1 ID=prot_S-ischiensis_contig9.20600.1|Name=mRNA_S-ischiensis_contig9.20600.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=306bp MMGSGSNGAPFSRSSRLPKAVKDVRYEARKVFGSFQAWVDRVNGAWRKATback to top mRNA from alignment at S-ischiensis_contig9:1798463..1811523- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20600.1 ID=mRNA_S-ischiensis_contig9.20600.1|Name=mRNA_S-ischiensis_contig9.20600.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=13061bp|location=Sequence derived from alignment at S-ischiensis_contig9:1798463..1811523- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:1798463..1811523- >mRNA_S-ischiensis_contig9.20600.1 ID=mRNA_S-ischiensis_contig9.20600.1|Name=mRNA_S-ischiensis_contig9.20600.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1836bp|location=Sequence derived from alignment at S-ischiensis_contig9:1798463..1811523- (Schizocladia ischiensis KU_0333)back to top |