mRNA_S-ischiensis_contig9.20566.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: D8LFK9_ECTSI (BCNT-C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFK9_ECTSI) HSP 1 Score: 122 bits (307), Expect = 3.090e-32 Identity = 65/114 (57.02%), Postives = 83/114 (72.81%), Query Frame = 1
Query: 7 VQVEEVKKFAGEQITVKRSVLEGSADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLRHS 348
V+V EVKK+AG+ I VKR V GSA+ A+ +K GGLD VLAAL+GPK++STV KSS DW+ +K G+E D++Q TKDG GYL++QDFLQRCDVR+FE E + R S
Sbjct: 140 VEVTEVKKYAGKDIVVKRKVTAGSAEHVAAAGAKK------GGLDNVLAALDGPKSISTVTKSSMDWETYKAAEGMEGDMEQATKDGKGYLNKQDFLQRCDVRKFETELEARQS 247
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A7S2S6Z9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S6Z9_9STRA) HSP 1 Score: 104 bits (260), Expect = 7.820e-25 Identity = 63/116 (54.31%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 1 KMVQVEEVKKFAGEQITVKRSVLEG--SADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLR 342
K V V E +FAG+ + V R VL SADQ AS K G LD L L GP+ +STVAKSSADWD +K ++G ++DL+Q K +GYL RQDFL+RCDVRQFE+ERDLR
Sbjct: 168 KRVTVTEKVRFAGQTVEVSRQVLSAGDSADQDAS----KAPAGPNSSLDKALEVLSGPRKISTVAKSSADWDRYKEESGTQDDLEQAAK--AGYLSRQDFLERCDVRQFEKERDLR 277
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A7S2CAI8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAI8_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.020e-21 Identity = 54/115 (46.96%), Postives = 79/115 (68.70%), Query Frame = 1
Query: 1 KMVQVEEVKKFAGEQITVKRSVLEGSADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTK-TGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLR 342
KMV V E +KFAG+ + +K+ VL+ +D + + + +G LD L AL+ PKA+STVAKS ADWD FK + T ++E ++Q + +G+L +++FL RCDVRQFEQERD+R
Sbjct: 125 KMVTVSETRKFAGKTVEIKKKVLQKPSDGATTNQKSGIPQGTSS-LDQALCALQAPKALSTVAKSEADWDTFKDQNTELKEQVEQAAR--NGFLTKKEFLGRCDVRQFEQERDIR 236
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A7S2AXH9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AXH9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.330e-20 Identity = 50/117 (42.74%), Postives = 76/117 (64.96%), Query Frame = 1
Query: 1 KMVQVEEVKKFAGEQITVKRSVLEGSADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTG-VEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLRHS 348
K V V E KKFAG+ +T + V++ + A+ + K GLD L+A++GPK++ST+ KS++DWD FK +G ++++L+ KDG L +Q+FL RCDVR FE+ERD R +
Sbjct: 4 KKVTVTETKKFAGQTVTTTKVVMQSKSAAAAAKPKEKT------GLDAALSAMQGPKSISTIEKSASDWDTFKDNSGALKDELEHAAKDGE--LKKQEFLDRCDVRAFEKERDQRQA 112
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: I2CQ62_NANGC (Craniofacial development protein 1 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQ62_NANGC) HSP 1 Score: 89.0 bits (219), Expect = 3.660e-20 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 64 VLEGSADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLRHS 348
++EG + S ++K GLD VL ++GP+ +STVAKSS DW+ FK + G+EE+L Q TKDG YL ++DFL+RCD R FEQERD R++
Sbjct: 28 MVEGKGGARGSEGKKKA------GLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNA 114
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A4D9CWA7_9STRA (BCNT-C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWA7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 9.820e-20 Identity = 60/146 (41.10%), Postives = 85/146 (58.22%), Query Frame = 1
Query: 13 VEEVKKFAGEQITVKRSVLEGSADQKA-------------SVARRK------------LQEGGGG---------GLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLRHS 348
V E KKFAG+++ VKR V+ A+ + ++++R+ + EG GG GLD VL ++GP+ +STVAKSS DW+ FK + G+EE+L Q TKDG YL ++DFL+RCD R FEQERD R++
Sbjct: 161 VTETKKFAGQEVQVKRVVVGEGAEGEGGREXXXXXXXXXXTLSKRQTALDPVVGPGPGMAEGKGGARGSEGKKAGLDAVLGEMKGPEGISTVAKSSYDWETFKAERGLEEELAQATKDG--YLVKKDFLERCDYRAFEQERDARNA 304
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A7S4D8B7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8B7_HETAK) HSP 1 Score: 90.9 bits (224), Expect = 1.130e-19 Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 1 KMVQVEEVKKFAGEQITVKRSVL----EGSADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLRH 345
K V+V EV FAG+ + + V E S Q+ S +K ++ G +D VLA L+ P +STV KSSADW+ FKT+ GV E+LK+ T+DG YL ++DFLQRCD R FEQE+ LR+
Sbjct: 158 KQVKVTEVVNFAGQSTQINKVVSAFDQEKSLGQENSTINKKNEKSG---VDAVLANLQEPTKISTVTKSSADWENFKTEEGVGEELKKSTQDG--YLTKKDFLQRCDERSFEQEKGLRN 271
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A8K1C5W9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5W9_PYTOL) HSP 1 Score: 87.4 bits (215), Expect = 7.760e-19 Identity = 52/122 (42.62%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 10 QVEEVKKFAGEQITVKRSVLEGSADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFE-------QERDLRHSGG 354
+V+EV KFAG++ +V + V A VA+ K + LD VLA+ EGPK ++T+ K+S DWD+FK + G+E++LKQ TKDG Y+ +Q+FLQR D+++FE ++R +R GG
Sbjct: 112 EVKEVVKFAGQEYSVSKRV--------APVAKSKQK------LDDVLASFEGPKKINTIEKTSIDWDKFKEQEGIEDELKQATKDG--YIEKQEFLQRMDLKRFEIEKAERERQRQMRQQGG 217
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A6J2YBK1_SITOR (Craniofacial development protein 1 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YBK1_SITOR) HSP 1 Score: 85.5 bits (210), Expect = 9.730e-18 Identity = 46/124 (37.10%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 7 VQVEEVKKFAGEQITVKRSVLEGSADQK-----ASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQERDLRHSGGSQR 363
V+++++ +FAGE++ V++ V + SA+ + +S + + + G G+ GVL+ L + +ST+ K+ DWD+FK + +EE+L+ K GYL RQDFLQR D+R+FE E+D+R++ ++R
Sbjct: 137 VKIKQIFEFAGEEVVVEKEVDKASAEARLLCSNSSTSNKGKKNGSLSGIGGVLSQLGKKQKISTLEKTKLDWDKFKQEENIEEELQTYNKGKDGYLDRQDFLQRADLRRFEIEKDIRNTERAKR 260
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Match: A0A3R7H270_9STRA (BCNT-C domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7H270_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.080e-17 Identity = 51/107 (47.66%), Postives = 73/107 (68.22%), Query Frame = 1
Query: 13 VEEVKKFAGEQITVKRSVLEGSADQKASVARRKLQEGGGGGLDGVLAALEGPKAMSTVAKSSADWDEFKTKTGVEEDLKQVTKDGSGYLHRQDFLQRCDVRQFEQER 333
V+ V KFAG++ +V S GSA + A K +GG LD VLA+L+ PK +ST+ KSS DWD+FK G++++LKQ TKDG Y+ +Q+FLQR D+++FE E+
Sbjct: 118 VDRVVKFAGKEYSV--STRAGSAGEAAG----KPAKGGAKALDKVLASLDEPKKVSTMEKSSLDWDKFKEAEGIDDELKQYTKDG--YIEKQEFLQRLDLKRFEIEK 216 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20566.1 >prot_S-ischiensis_contig9.20566.1 ID=prot_S-ischiensis_contig9.20566.1|Name=mRNA_S-ischiensis_contig9.20566.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=120bp MVQVEEVKKFAGEQITVKRSVLEGSADQKASVARRKLQEGGGGGLDGVLAback to top mRNA from alignment at S-ischiensis_contig9:1447853..1450905- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20566.1 ID=mRNA_S-ischiensis_contig9.20566.1|Name=mRNA_S-ischiensis_contig9.20566.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=3053bp|location=Sequence derived from alignment at S-ischiensis_contig9:1447853..1450905- (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:1447853..1450905- >mRNA_S-ischiensis_contig9.20566.1 ID=mRNA_S-ischiensis_contig9.20566.1|Name=mRNA_S-ischiensis_contig9.20566.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=720bp|location=Sequence derived from alignment at S-ischiensis_contig9:1447853..1450905- (Schizocladia ischiensis KU_0333)back to top |