mRNA_S-ischiensis_contig9.20563.1 (mRNA) Schizocladia ischiensis KU_0333

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_S-ischiensis_contig9.20563.1
Unique NamemRNA_S-ischiensis_contig9.20563.1
TypemRNA
OrganismSchizocladia ischiensis KU_0333 (Schizocladia ischiensis KU_0333)
Homology
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: D8LSM1_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM1_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 3.470e-84
Identity = 150/287 (52.26%), Postives = 197/287 (68.64%), Query Frame = 1 
Query:    4 YRVGFLRQVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEELLTLYGFDERGVGATWPLLFL---YLAVFH----LLCLAFLLPGRSRL 843
            + VGF  QV AV+GR WT+Q R+ D L AL  KN  + V+ A +F+QKG V   A L+DP   DVT  ASNVL +LYFG LYG TGHLQAIP++F  KR F RERA GMYST VYWLV++TVH+P++L G++VY+N CYW+LGL  +   ++ F+  G + TL+GY+ AQ L+AAM TPQ A A +PL+F+T ANF+GF VR+P V  W+ WLC+ S+ RW++Q++AVN+F  FDEG +LL LY       G   P L +   Y+ + +    LL L FL P RSRL
Sbjct:  175 HAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQNAFATWPLVFVTAANFSGFTVRLPAVRVWFSWLCNFSFCRWIYQLMAVNQFHDFDEGPKLLDLY------FGTGRPTLLVNAVYVGLVYSTSLLLALFFLHPRRSRL 455
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 8.620e-83
Identity = 151/291 (51.89%), Postives = 198/291 (68.04%), Query Frame = 1 
Query:    4 YRVGFLRQVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQA----AIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEELLTLYGFDERGVGATWPLLFL---YLAVFH----LLCLAFLLPGRSRL 843
            + VGF  QV AV+GR WT+Q R+ D L AL  KN  + V+ A +F+QKG V   A L+DP   DVT  ASNVL +LYFG LYG TGHLQAIP++F  KR F RERA GMYST VYWLV++TVH+P++L G++VY+N CYW+LGL  +   ++ F+  G + TL+GY+ AQ L+AAM TPQA    A A +PL+F+T ANF+GF VR+P V  W+ WLC+ S+ RW++Q++AVN+F  FDEG +LL LY       G   P L +   Y+ + +    LL L FL P RSRL
Sbjct:  579 HAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQARTANAFATWPLVFVTAANFSGFTVRLPAVRVWFSWLCNFSFCRWIYQLMAVNQFHDFDEGPKLLDLY------FGTGRPTLLVNAVYVGLVYSTSLLLALFFLHPRRSRL 863
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: W7TLH8_9STRA (Abc transporter g family member 29 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLH8_9STRA)

HSP 1 Score: 167 bits (423), Expect = 7.830e-43
Identity = 99/297 (33.33%), Postives = 164/297 (55.22%), Query Frame = 1 
Query:    4 YRVGFLRQVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEELLTLYGFDERGVGATWPLLFLYLAVFHLLCLAFLLPGRSRLCAAVPAELLAREAREKR 894
            +  G   Q + +  R+W  Q RQ   + A   KN++VA +  A+F+ +G V        P +      + NV ++L+F +LY   G+LQAIP +F  + L+VRER+A +YST  YWL NA V++P++L  +V+++N  Y  + L     +++       L  ++ +T AQ LAA+ P+ Q A+A FP+ F+ + +FAGF V + ++ + W W   +SY RW ++ +  ++F    +G   +  YGF     G ++ +LF++L +F+ L    LLP RSRL      E   RE  EK+
Sbjct:  176 FPTGLGNQCRVLLERSWLTQTRQLGFIRAQIAKNLIVASVCGAVFYGQGAVP-------PPSDQFNQESFNVSSILFFAMLYTIVGNLQAIPQLFTQRVLYVRERSAFLYSTFAYWLANALVNLPLVLLCHVIFLNVAYLLVQLDRSPSVFFYTQFVTMLNNVVAFTFAQFLAASAPSAQVALAIFPVTFLFLTSFAGFTVPLQDLPSGWIWASYISYPRWCYEGIVASQFSVRIDGASTMEYYGFGGWEPGKSFYILFIFLLLFNGLVYWGLLPRRSRLVDMEDREGEMREKGEKK 465
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: W7TH06_9STRA (Atp-binding cassette superfamily n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TH06_9STRA)

HSP 1 Score: 155 bits (393), Expect = 7.250e-39
Identity = 95/273 (34.80%), Postives = 145/273 (53.11%), Query Frame = 1 
Query:   25 QVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEELLTLYGFDERGVGATWPLLFLYLAVFHLLCLAFLLPGRSRL 843
            Q   +  R W  Q RQ + + A   KNV+VA +  AIF+ +G         + +    +  + NV +L YF +LY     LQ IP +F    L+ RER+A +YST  YW  NA V VP+LL  +V++V   YW +GL  +A  +    L  FL  LI +  AQ +AA  P+ + A+A FPL+F+ + +FAGF + +  +   W+W   +SY RW +Q + +NEFQ   +   +LT Y F         P+L  ++ + ++     LLP +SRL
Sbjct:  327 QTYTLVNRFWIAQSRQWEFVVAQLGKNVVVASICGAIFFGQGR--------EKSLSTFSNVSFNVSSLWYFAMLYTVLSCLQIIPQLFFFGVLYNRERSANVYSTFAYWAANAIVCVPLLLLSHVIFVEISYWMVGLYPNAACHLFALLVTFLNNLISFYCAQCIAAISPSAEVALAMFPLVFLFLGSFAGFTIPLGELPPGWKWASYISYPRWTYQALIINEFQYRADRTAVLTFYSFTGFNKYLALPILAAFIVLMNVFVYIGLLPKQSRL 591
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: A0A482RW87_9ARCH (ATP-binding cassette domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RW87_9ARCH)

HSP 1 Score: 126 bits (317), Expect = 7.830e-29
Identity = 83/277 (29.96%), Postives = 146/277 (52.71%), Query Frame = 1 
Query:   19 LRQVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEE------LLTLYGFDERGVGATWPLLFLYLAVFHLLCLAFLLPG 831
            L Q++ +  R +    R  DA+ AL  KNV+V ++   +F+++  V+T    L    G   ++  N+ AL++FG++Y    +++AIP +     +F RE  A  YS + +WL +    +P+LL G++ +V A Y+ +  +  A   + F    FL +L  Y  A  +AA       ++A F L  + +A FAG+A+ V +V+A W+W   VSYVRW F+ + VN+++ +   ++      +L LY FD      ++ ++FL + +F  L    L P 
Sbjct:   47 LTQLRMLLYRDFLSITRDTDAVKALVGKNVMVGLLIGIVFYKQVQVNTP---LFNQVGVPESDVLNISALIFFGMMYTMISNVEAIPYLVIKSIIFKREVNAFAYSVSPFWLSHTVTVIPLLLLGFLAFVIAAYFLVSFSLSAAYMFYFWSIMFLASLSSYYLAMFIAALTNDQNLSLALFILSVLFLATFAGYAIPVNDVSAGWQWATYVSYVRWAFEGLMVNQWEPYGSSQDNDGQGTVLDLYDFDNYDKSNSYWIMFLTIGIFCTLAYLALRPS 320
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: A0A482SQ92_9ARCH (ATP-binding cassette domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SQ92_9ARCH)

HSP 1 Score: 115 bits (288), Expect = 5.740e-25
Identity = 76/265 (28.68%), Postives = 133/265 (50.19%), Query Frame = 1 
Query:   67 RQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEE------LLTLYGFDERGVGATWPLLFLYLAVFHLLCLAFLLPGRSRL 843
            R   A+ AL  KN +V ++   +F+Q+  V+T    L    G      +N+ AL++FG+++    + +AIP +     +F RE  A  YS + YWL +    +P+LL G++ +  + Y+ +         + F     L +L  Y  A A+AA     + ++  FPL F+ ++ FAG+A+ V +V+  W+W   VSYVRW FQ +  N++  ++  E+      +L  YGFD   +  ++ ++   + V   L    + P RS L
Sbjct:  285 RDTHAIVALVSKNFIVGLLIGIVFFQQVKVTTP---LFNVYGVPEPEVTNISALIFFGMMHTMVSNAEAIPHLVTKSLVFRREINAFAYSVSPYWLSHVLTVIPLLLVGFMTFAVSTYFLVSFPLAFSYMFYFLTMMLLASLSSYYLAMAIAAYTNDQKLSLTIFPLCFLFLSTFAGYAIPVKDVSVVWKWATYVSYVRWAFQGLMNNQWGRYNSPEDNDGYHTVLDYYGFDNYNMYNSYWIMCFTIGVMVTLAYLAMRPQRSYL 546
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: A0A7S2B2D3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2D3_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 4.290e-20
Identity = 69/245 (28.16%), Postives = 113/245 (46.12%), Query Frame = 1 
Query:   79 ALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEEL--LTLYGFDERGVGATWPLLFLYLAVFHLL 807
            +L+A  ++N+ V V    +++Q+ +  T A                  ++ YF   +    +LQAIP MF  + LF RER AG YS A Y +    V+  V L     Y   CY+ +GL      +  F    F  ++ GY  +  +AA  P  Q+A+  +   F     F G+++ V  V  +WRW  +VS+ R+ F+ + +N+F G D  + +  +  +G        T    F+ LA FH+L
Sbjct:    5 SLYAGFMRNLFVGVWYGCVYYQQTDYHTLA------------------SVCYFSQQFICMSNLQAIPQMFEERTLFYRERGAGFYSEASYLMARVLVNATVQLWFVFAYSALCYFLVGLRGTWKDFLYFYAIMFGLSIAGYAFSNMIAALTPNQQSAMNLYSAGFQFCMFFCGYSIPVDEVPDYWRWATEVSFARYSFESLILNQFSGDDSTDAVYYMKYWGVYHVSKWRTMGYFFVSLACFHVL 231
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: A0A7S4CF29_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CF29_9EUGL)

HSP 1 Score: 84.3 bits (207), Expect = 1.830e-14
Identity = 63/264 (23.86%), Postives = 121/264 (45.83%), Query Frame = 1 
Query:  103 NVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFD-----------------EGEELLT-LYGFD------ERGVGATWPLLFLYLAVFHLLCLAFL 822
            +V  A++  +I++Q  N             +V     N   +L+F  + G   +L ++      + +FVRERAAGMY  + Y++    + +P+ L    ++    YW +GL A+   ++ + +  ++  +  Y+    ++   P+   A    PL+ +     +GF V + ++  +WRWL  VS+ R+ F+ + +NEF G +                  G+++L   + FD      + G+ A   +L+L+   F  LCL FL
Sbjct:  396 SVFFALLIGSIYYQVSN-------------NVNPGIQNRAGVLFFLAMNGAFSNLGSLELFLEGRNIFVRERAAGMYKASSYFVGTVLMDLPLPLLYCSIFTGIAYWMIGLQANWHCFFWYIVISYVINMCSYSLCLFVSCFAPSFAIANLIAPLVIVMFLLPSGFLVNIADLPVYWRWLKYVSFFRYGFEALMINEFSGLELTTNPSKFAPHRPGKPVMGDDILEERFNFDPSGFYADLGICAGQAMLYLF---FAFLCLTFL 643
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: A0A821HT55_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A821HT55_9BILA)

HSP 1 Score: 77.8 bits (190), Expect = 1.820e-12
Identity = 55/226 (24.34%), Postives = 101/226 (44.69%), Query Frame = 1 
Query:   25 QVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQG 702
            QV+ +  R +  Q RQ   +    V+ V++A++   ++ + G+   S    +PA             L +  V  G  G L  I      + L +RERA+G Y  + Y++        + +   +++ +  Y+ +G  A A  ++ FA    LC+L   + A  ++A   T   ++   PL       F GF +    +  ++ WL  +SYV++ F  +A+NE QG
Sbjct:  126 QVRILLHRTFQEQFRQKQIIVTSLVQTVIMAILIGTVYLKIGHTQKSIVRREPA-------------LFFCAVNQGVFGALMVINSFPVERALTLRERASGTYYASAYFIAKIVAETLIQIPVPIIFSSVLYFLIGFQATAGKFFLFAFFMLLCSLAATSLALLVSAICKTTDMSVTVLPLALEITRLFGGFFLAPSRLPKYFAWLDALSYVKYTFVGIALNELQG 338
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BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Match: A0A819ERX7_9BILA (Hypothetical protein n=8 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819ERX7_9BILA)

HSP 1 Score: 78.2 bits (191), Expect = 2.230e-12
Identity = 55/226 (24.34%), Postives = 101/226 (44.69%), Query Frame = 1 
Query:   25 QVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKGNVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKRLFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADADIYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGFAVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQG 702
            QV+ +  R +  Q RQ   +    V+ V++A++   ++ + G+   S    +PA             L +  V  G  G L  I      + L +RERA+G Y  + Y++        + +   +++ +  Y+ +G  A A  ++ FA    LC+L   + A  ++A   T   ++   PL       F GF +    +  ++ WL  +SYV++ F  +A+NE QG
Sbjct:  452 QVRILLHRTFQEQFRQKQIIVTSLVQTVIMAILIGTVYLKIGHTQKSIVRREPA-------------LFFCAVNQGVFGALMVINSFPVERALTLRERASGTYYASAYFIAKIVAETLIQIPVPIIFSSVLYFLIGFQATAGKFFLFAFFMLLCSLAATSLALLVSAICKTTDMSVTVLPLALEITRLFGGFFLAPSRLPTYFAWLDALSYVKYTFVGIALNELQG 664
The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20563.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSM1_ECTSI3.470e-8452.26ABC transporter domain-containing protein n=1 Tax=... [more]
A0A6H5KKK8_9PHAE8.620e-8351.89ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
W7TLH8_9STRA7.830e-4333.33Abc transporter g family member 29 n=2 Tax=Monodop... [more]
W7TH06_9STRA7.250e-3934.80Atp-binding cassette superfamily n=1 Tax=Nannochlo... [more]
A0A482RW87_9ARCH7.830e-2929.96ATP-binding cassette domain-containing protein n=1... [more]
A0A482SQ92_9ARCH5.740e-2528.68ATP-binding cassette domain-containing protein n=1... [more]
A0A7S2B2D3_9STRA4.290e-2028.16Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S4CF29_9EUGL1.830e-1423.86Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A821HT55_9BILA1.820e-1224.34Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 ... [more]
A0A819ERX7_9BILA2.230e-1224.34Hypothetical protein n=8 Tax=Rotaria sp. Silwood2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-ischiensis_contig9contigS-ischiensis_contig9:1422185..1427825 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Schizocladia ischiensis KU_03332021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score288.1
Seed ortholog evalue4.8e-75
Seed eggNOG ortholog2880.D8LSM1
EggNOG free text desc.ATPase activity, coupled to transmembrane movement of substances
EggNOG OGsCOG1131@1,KOG0061@2759
COG Functional cat.V
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons6
Model size921
Cds size918
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_S-ischiensis_contig9.20563.1prot_S-ischiensis_contig9.20563.1Schizocladia ischiensis KU_0333polypeptideS-ischiensis_contig9 1422187..1427825 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817385.8105288-CDS-S-ischiensis_contig9:1422186..14224291622817385.8105288-CDS-S-ischiensis_contig9:1422186..1422429Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1422187..1422429 -
1695741074.2846923-CDS-S-ischiensis_contig9:1422186..14224291695741074.2846923-CDS-S-ischiensis_contig9:1422186..1422429Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1422187..1422429 -
1622817385.8254724-CDS-S-ischiensis_contig9:1423028..14231601622817385.8254724-CDS-S-ischiensis_contig9:1423028..1423160Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1423029..1423160 -
1695741074.304912-CDS-S-ischiensis_contig9:1423028..14231601695741074.304912-CDS-S-ischiensis_contig9:1423028..1423160Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1423029..1423160 -
1622817385.8388572-CDS-S-ischiensis_contig9:1424367..14245561622817385.8388572-CDS-S-ischiensis_contig9:1424367..1424556Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1424368..1424556 -
1695741074.317983-CDS-S-ischiensis_contig9:1424367..14245561695741074.317983-CDS-S-ischiensis_contig9:1424367..1424556Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1424368..1424556 -
1622817385.8503857-CDS-S-ischiensis_contig9:1425320..14254041622817385.8503857-CDS-S-ischiensis_contig9:1425320..1425404Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1425321..1425404 -
1695741074.334164-CDS-S-ischiensis_contig9:1425320..14254041695741074.334164-CDS-S-ischiensis_contig9:1425320..1425404Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1425321..1425404 -
1622817385.8625674-CDS-S-ischiensis_contig9:1427194..14273161622817385.8625674-CDS-S-ischiensis_contig9:1427194..1427316Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1427195..1427316 -
1695741074.3469675-CDS-S-ischiensis_contig9:1427194..14273161695741074.3469675-CDS-S-ischiensis_contig9:1427194..1427316Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1427195..1427316 -
1622817385.8763647-CDS-S-ischiensis_contig9:1427677..14278251622817385.8763647-CDS-S-ischiensis_contig9:1427677..1427825Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1427678..1427825 -
1695741074.3635604-CDS-S-ischiensis_contig9:1427677..14278251695741074.3635604-CDS-S-ischiensis_contig9:1427677..1427825Schizocladia ischiensis KU_0333CDSS-ischiensis_contig9 1427678..1427825 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_S-ischiensis_contig9.20563.1

>prot_S-ischiensis_contig9.20563.1 ID=prot_S-ischiensis_contig9.20563.1|Name=mRNA_S-ischiensis_contig9.20563.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=306bp
GYRVGFLRQVQAVFGRAWTIQGRQADALWALGVKNVLVAVMTAAIFWQKG
NVSTSARLLDPATGDVTANASNVLALLYFGVLYGTTGHLQAIPDMFASKR
LFVRERAAGMYSTAVYWLVNATVHVPVLLGGYVVYVNACYWSLGLAADAD
IYWTFALSGFLCTLIGYTSAQALAAAMPTPQAAIAAFPLLFITMANFAGF
AVRVPNVAAWWRWLCDVSYVRWLFQIVAVNEFQGFDEGEELLTLYGFDER
GVGATWPLLFLYLAVFHLLCLAFLLPGRSRLCAAVPAELLAREAREKREE
EEEAWG
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mRNA from alignment at S-ischiensis_contig9:1422185..1427825-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_S-ischiensis_contig9.20563.1 ID=mRNA_S-ischiensis_contig9.20563.1|Name=mRNA_S-ischiensis_contig9.20563.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=5641bp|location=Sequence derived from alignment at S-ischiensis_contig9:1422185..1427825- (Schizocladia ischiensis KU_0333)
GGCTATCGAGTGGGTTTCTTACGGCAGGTGCAGGCGGTGTTTGGGCGGGC
GTGGACCATCCAGGGCCGGCAGGCGGACGCCCTGTGGGCGCTGGGGGTGA
AAAACGTGCTGGTGGCGGTCATGACCGCGGCTATCTTCTGGCAGAAGGGT
GGGTGGGGGCAGTGATGGATATAACCAAATCAACCTATCTATCGACAGAT
CTGGGTGGGGGCAGTGATGGATATATCTAGGCAAATCAACGTATCTACCG
ACAGTACTGATCTATTTTGAGTGGTAGATAAGCGGTGAGTTCAGTATATA
TCTATCGATAGTCGATACTTCGTATTTGATAGTTTGACCCACACTAAATC
CAAGTACTTCCAAGTAGTTAGTATTGCATCCCACGATATCAGTCGAGCCC
GATAACTATCTACTGATCGATATTCCATCACTGCGATTTGCCTGCCCCTC
GTAGCAACTAGCCAAGCCCCCTCGCCTGCCTACTGTTTCTTGCTCGTGGA
TGATTGCAGGGAACGTGTCTACCAGCGCCCGCCTGCTGGACCCTGCAACG
GGGGACGTCACTGCCAACGCCTCCAATGTTTTGGCACTCCTCTACTTTGG
CGTACTGTACGGGACCACGGGGCACCTGCAGGCAAGCCGTGCGACCCGGG
GATGCGATGTGATGTTGTGGCAAACTACGTACTTGAGTACTCGAGTACAG
TGTTTTTTGACGTGACTGCCAACGCCTCGAATGTTTTGGCACTCCTCTAC
TTCGGTGTGCTGTATGGAACCACGGGCCACCTGCAGGCAAGCCGCGCGAC
CTTGGGAGGGGGATACGATGTGATGTTAGGCGAAACCCATGTATTTCAGT
ATGAAGTACTTGAGTACAGTGTTTTTATTGTGGCTACTTGCACCACGTCA
CATCACGCCGCGCGACCTGGGGGGGGGGATACGATGTGATGTTATGGCAA
ACTATCGCAATCGGCGGAGAGATATTGCCCTCACGGGCCAATTTTCGGAG
GAAAAATTCTAGCCTGGAAGGTGCCGAATTTTCCCGAAAACTCTCCGAAA
AGTTCCCCCAGGTCCTGAGGGAGATTCCCCGAGTTTTCCCGCGCGAATCC
GACCAGTATTCGGAGAAAAGTTCTCCCAAAAATTGGCATGGGGGGGCAAG
ATCTTCCGACGAGTACGGTACTTCCAGAAGTACGTACTTGAGTACTCTAC
AGTGCTTGTTGTGTGGCTACTTGCACCAAGTCACATCACACCACATGAAT
CGTTGCGTCGGAGGGGTAAGAGGGGGTCCTCTACTTTGGCGTGCTGGACG
GAACCACGGGCCACCTACAGGCAAGCCGCGCGATCTGAGGGGGGAATACA
ATGGGATTGTCGCGCTATGAGGCGCTTGCAGCACACCAATGTCTATATCC
CTGGGAAGGAAGACTGGACTGCCGTGAGGCAGGAGCTCATGCTGGTAGAA
AAGGGAACTGACGTTGGGGTGCTTAGTTGTATAGGAGAACAACCTCTGAC
TGCCTGGAGGGGCAGGAGGAATAGAAGGTTCTGTAGGACTATCCTATGAG
GAGAGTCAGGGGAAACAAGTAGTCTTTCATGAGCTAGCAGCATCTGTAGG
TAGACAGAGAAAGACCCAGAAGGCTAACAGTAGCTGCAGGGGAGCAGAAA
GAAGTGGCCTATAATGCATATATCTCAACAGTGGTGTTATGGCACGCGCT
TTGGCAGAACCACGAGCACACCTGGATTGCCTCTCGGAGAGGGGTCTTCC
GCGAAACAGCACATGGACGCCTGCTACCTGCTCCTCACCCACACGCCTGC
CACCTCTCTGGGCCGGCGATGGAATATCGATCAGTAGATGGTTATCGGGA
TCGACTGATTTTGTCGGCGGCGTTACTATAGCTGCGAGTGGAAAACAGGA
GGTGTTCCTACTTAACACACCTCCTCTTTTCCACTCGCTTTTTATCTTCC
TGCCAAAAACTACTTGGATTTTGTGTGGGTCAAACTATCGAACATCGACT
ATCGATAGATATATACTGTAGATCGGCACTGTCGATAGATACGTTGATTT
GCTTAGGTATTCCATCACTGCTCTGGGCCGCCCCTGACACACGTTACGTT
TGCCTTGTGGAGCGGCCCCCGAGGGCCTTCCCTCGCCCCCCGGGGGGGGA
ATTCGTCGCACATGTGCACGCCTGCCTCCCACGACCCCGTCCAACGCCCT
TCAGTGATGGAATATCGATCAGTAGATAGCTATCGGGCTCGACTGATTTG
TGGGTGGATTTACTAGCTGCTGGGATTTAGTGTGGGTCAAACTATCGAGT
ATCGACTATCGATAGATATATAATTTCGATAACTGGGTTGATTTGCTTAG
ATCTTCCGTCACTGACGCCCTTCTTCGCCGTCGGCCCCTCCCACCGCCCG
CCCCGCCTGTCGCCTCTCCAGGCAATCCCGGACATGTTTGCCTCCAAGCG
GCTCTTCGTCCGTGAACGCGCCGCGGGGATGTACAGCACCGCCGTGTACT
GGCTGGTGAGACGCCGCATAATCCTTTCCCCCCCCTGGGGATTGTGCATT
CATAGGGTTGTAGTGTGTAGGTCCAATTTTGCAGGGGTAAAGGGGTTGAA
GTCATACCTAGAGGTTAACCCTGGTACCCCCGGGGTCCGTGTAGTCATAG
GGTCTTAGCGTGTAAGTCCAATTTAGCAGGGGTAAAAGGGTTGAAGTCCT
TGGAGCGCCTCTGTCGGCTGTGGCACGGTCGTTGGAGTGGCGGGCCCGGG
CATTGCTCAGGAGCGCTACCAAGCTTGCTGTGCTGGCAGCGGGCCGCACG
CCAGCAGGCCCCTTTGACCTGGGATGTGGGATATGGCTCCTCCCCCTCCT
CCTCCTCTGTATCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCAGGTTCC
TCGTAGCTACTGTACAATAGTGTCTCTCAGAGGGCTAGTACGTGATGCTC
GGGCAGCAGAGTACGAGTGCAGCACTCGCTTTAGAAGACATACCCTTACC
GCACCCTTTTGCTCGGCCGAGCTGGGTTCCTACTGTAGAGCTCTAGTTGC
TTCCAGAAGTGCAATAGTGTCTCTCAGAGGGTGAGTACGTGATGCTCGGG
AAGCAGGGCACAGTACTTGCTTTAGAAACGCGTACTACGGTACAGTACTT
CCCTCATGTTTCCTAGGCGGAGGTCTTCAATAACAAATACCCTTTTGTTT
TCCTACTACTTCGTACAGTACAATACGCACTATCGCTCACTTGCCGCGCC
CTTTTGCTCGGCCGGGCAGGTGAACGCCACGGTGCACGTGCCCGTGCTAC
TGGGGGGGTACGTCGTCTACGTGAATGCCTGCTACTGGTCGCTGGGCCTG
GCCGCCGACGCGGACATCTACTGGACGTTCGCCCTGTCCGGCTTCCTGTG
CACGCTCATCGGGTACACCTCGGCGCAGGCGCTGGCCGCGGCCATGCCCA
CGCCACAGGTACTGTACGAGTATTATCTTACCCGACACAATGATCTGTGT
GGTTTTACTGAGCACATACCGTACTACGAAGTACTTTGGAAGTATGTATT
TTCATTACCCGACGCAATGATCTGTGCGGTTTAACTGAGCACATACCGTA
CAGATGTATCTGTAGTATAAAACGCCGCAGGTATGCTAATGCCTGGCGCC
TGTGCATGCGCGCGGCCTCTCATTGGCAGACGGCACCCCGCCGCCCCGGC
TCATTGGTCAACGCCCCCCCCCCCTCCCATTGGCCAACGCCCTCTCCGGC
TTCCTGTGTACGCTCATCGGGTACACCTCGGCGCAGGCACTGGCCGCGGC
CATGCCCACGCCGCAGGTACCGCAATCGTCGGAGAGATTTTGCCCCCCCA
TGCCACTTTTCGGGAGGACTTTTCTCGCCGAATGCTGGTCGGATTCGCGC
GGGAAAGGGGAACTTTTCTGAGTTTTCGGGACAATTCAGGGCCTTCCTGG
CTAGAAATATTCCCCCGAAAATTGGCCCATGGGGGCGAAATCTCTCATTA
CGGTATGCCTGGCGCCTGTGCCCACGGCCCCTTATTGGCCGACGCCGCCC
CGCCACGCAAGCTCATTTGTCAACGCCCCCTCCCCCTCCCATTGGCCAAC
GGCGCCCCGCCGCGTCGGCTCATTCGTCAACGCCCCCTCCCCCTCCCGCT
CCACCCAAGCCGCCTACAATAGTTGGTGGCCGTCGCCTATGTCGGTCCGT
CCGTTGCGTTGTCCCTCCCCCGCCGTTCATCCTTGGCATTCCGTTCTTGC
CCATCTATCTGCCTGTCCGCCTGTCCCGCCTGTCTGTCCGTCGCCCGTGA
TGGAATATCGATCTGCAGTAGATAACTATCGGGCTCGGCTGATTTTGTGG
GTGGTGTTGCTACTGCTACTGCTTGGATTTAGTGTGGGTCAAACTATCGA
ATATCGACTATCGATAGATATGTACGTGGTAGATCAGTACTGTCAATAAA
TAGGTTGATGTGCTTAGATATTCCATCACTGTCCGCCGCACGCTGTGCCA
GGGTTGGCACTTAACTCCTGGGTGGTACCCTTTTAGGCCCTTGAGTACAT
TAGAGGTACTTAGGGGTAGCTAGCCCTAAAATGAAGGCTAGCTAGGCCCT
ACTTTGCCTCTAAGTACCAACCCTGTTCCGTGCATCTTGTCCGTCCGTCC
GTGCATCGCAATCAGGCGGCCATCGCGGCCTTCCCGCTCCTCTTCATCAC
CATGGCGAACTTCGCCGGCTTTGCGGTCCGCGTGCCCAACGTGGCCGCCT
GGTGGCGGTGGCTCTGCGACGTCAGCTACGTCCGCTGGCTTTTCCAGGTG
CGCGACGGTGTTTCCAACTCTTTTTTTCTTCCCCTGCTTACTCCAAAGTA
CTTGTGCTTGTTTTTAACTCTTTTGGCTGCGGTAGCGTGGCCCTCAACTC
TTGCATGCCTGAGTACTACAGTACCGTAGTACAGTACAGTCCACTGCGGT
GCTATAGCTGCATGTTCACCGTGCGCACAATAACACCAATGATGAATGAA
TCCAGTCGCGCTCACGCGCACGCCTGCCCATGCTCCCGCCACCAACTTGC
CGTACACTGTGCTGTCCCATGGACGGAGGCGTGCTAGAAGTCTCCTCGCA
AAACTATACGGTCTTCAGCATCGGAAAATGTGTTTAGGAAGCGTTAGCTT
TTCCTTTGTAATTCGAAGTAGTCGTATACTACTTGATTAGAAAGGCGCCG
ATTTCCGGACAATCTCAGAAGACCCTATAGTTTGGCGAGGATTTTCTAGC
ACGCCTCTGTCCCATGGATGTACCTGGCTCCGTCGTATGTGTTGGTTGCG
CGCCCCCCCCCCGCGCGCTCAAACGGTCTTTCTTTTGTGTTGCCGGCGGC
GGGGCGACCGACCCACGGGGGGCCGGCCGGCTGCTGGGGCGCGAAGATTG
TGGCAGTGAACGAGTTCCAGGGCTTTGACGAGGGGGAGGAGCTTCTGACC
CTGTACGGGTTCGATGAGCGAGGCGTGGGGGCTACATGGCCCCTGCTGTT
CCTCTACCTGGCGGTTTTCCACCTCCTTTGCCTGGCGTTCCTGCTCCCGG
GCCGCTCGCGGCTGTGCGCGGCGGTGCCTGCGGAGCTGCTGGCCCGGGAG
GCGCGGGAGAAGAGGGAGGAGGAGGAGGAGGCCTGGGGGGC
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Coding sequence (CDS) from alignment at S-ischiensis_contig9:1422185..1427825-

>mRNA_S-ischiensis_contig9.20563.1 ID=mRNA_S-ischiensis_contig9.20563.1|Name=mRNA_S-ischiensis_contig9.20563.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=1836bp|location=Sequence derived from alignment at S-ischiensis_contig9:1422185..1427825- (Schizocladia ischiensis KU_0333)
GGCTATCGAGTGGGTTTCTTACGGCAGGTGCAGGCGGTGTTTGGGCGGGC
GTGGACCATCCAGGGCCGGCAGGCGGACGCCCTGTGGGCGCTGGGGGTGA
AAAACGTGCTGGTGGCGGTCATGACCGCGGCTATCTTCTGGCAGAAGGGG
CTATCGAGTGGGTTTCTTACGGCAGGTGCAGGCGGTGTTTGGGCGGGCGT
GGACCATCCAGGGCCGGCAGGCGGACGCCCTGTGGGCGCTGGGGGTGAAA
AACGTGCTGGTGGCGGTCATGACCGCGGCTATCTTCTGGCAGAAGGGGAA
CGTGTCTACCAGCGCCCGCCTGCTGGACCCTGCAACGGGGGACGTCACTG
CCAACGCCTCCAATGTTTTGGCACTCCTCTACTTTGGCGTACTGTACGGG
ACCACGGGGCACCTGCAGGGAACGTGTCTACCAGCGCCCGCCTGCTGGAC
CCTGCAACGGGGGACGTCACTGCCAACGCCTCCAATGTTTTGGCACTCCT
CTACTTTGGCGTACTGTACGGGACCACGGGGCACCTGCAGGCAATCCCGG
ACATGTTTGCCTCCAAGCGGCTCTTCGTCCGTGAACGCGCCGCGGGGATG
TACAGCACCGCCGTGTACTGGCTGGCAATCCCGGACATGTTTGCCTCCAA
GCGGCTCTTCGTCCGTGAACGCGCCGCGGGGATGTACAGCACCGCCGTGT
ACTGGCTGGTGAACGCCACGGTGCACGTGCCCGTGCTACTGGGGGGGTAC
GTCGTCTACGTGAATGCCTGCTACTGGTCGCTGGGCCTGGCCGCCGACGC
GGACATCTACTGGACGTTCGCCCTGTCCGGCTTCCTGTGCACGCTCATCG
GGTACACCTCGGCGCAGGCGCTGGCCGCGGCCATGCCCACGCCACAGGTG
AACGCCACGGTGCACGTGCCCGTGCTACTGGGGGGGTACGTCGTCTACGT
GAATGCCTGCTACTGGTCGCTGGGCCTGGCCGCCGACGCGGACATCTACT
GGACGTTCGCCCTGTCCGGCTTCCTGTGCACGCTCATCGGGTACACCTCG
GCGCAGGCGCTGGCCGCGGCCATGCCCACGCCACAGGCGGCCATCGCGGC
CTTCCCGCTCCTCTTCATCACCATGGCGAACTTCGCCGGCTTTGCGGTCC
GCGTGCCCAACGTGGCCGCCTGGTGGCGGTGGCTCTGCGACGTCAGCTAC
GTCCGCTGGCTTTTCCAGGCGGCCATCGCGGCCTTCCCGCTCCTCTTCAT
CACCATGGCGAACTTCGCCGGCTTTGCGGTCCGCGTGCCCAACGTGGCCG
CCTGGTGGCGGTGGCTCTGCGACGTCAGCTACGTCCGCTGGCTTTTCCAG
ATTGTGGCAGTGAACGAGTTCCAGGGCTTTGACGAGGGGGAGGAGCTTCT
GACCCTGTACGGGTTCGATGAGCGAGGCGTGGGGGCTACATGGCCCCTGC
TGTTCCTCTACCTGGCGGTTTTCCACCTCCTTTGCCTGGCGTTCCTGCTC
CCGGGCCGCTCGCGGCTGTGCGCGGCGGTGCCTGCGGAGCTGCTGGCCCG
GGAGGCGCGGGAGAAGAGGGAGGAGGAGGAGGAGGCCTGGGGGATTGTGG
CAGTGAACGAGTTCCAGGGCTTTGACGAGGGGGAGGAGCTTCTGACCCTG
TACGGGTTCGATGAGCGAGGCGTGGGGGCTACATGGCCCCTGCTGTTCCT
CTACCTGGCGGTTTTCCACCTCCTTTGCCTGGCGTTCCTGCTCCCGGGCC
GCTCGCGGCTGTGCGCGGCGGTGCCTGCGGAGCTGCTGGCCCGGGAGGCG
CGGGAGAAGAGGGAGGAGGAGGAGGAGGCCTGGGGG
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