mRNA_S-ischiensis_contig9.20508.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A0A9W6P7_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9W6P7_LYGHE) HSP 1 Score: 273 bits (698), Expect = 1.730e-77 Identity = 152/413 (36.80%), Postives = 237/413 (57.38%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKAN--------KVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETG-IILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSARRDD---KEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQGAVAV 1203
EP T ++A+ GPD W+EA+++EL L N + PP + + +V+KIK+ ADGSVERYK RLVA+GFTQ+ VD+ +T+SPV L +R L AV + W +H +D AYLN L+E+I++ LP+G I + + K LYGLKQS WY+ L K+L G S ++ C+Y+ +S DG + ++L YVDD E + M+ L +E +DLG + +LG+ + E G + ++Q + + I+T +D + +SP+DP +LS + +E+ + PY ++GKLM+LA TRPD+A V +LG ++ P +HW + VLRYL GT + + + D +I +SDSDW + R+S TG I+ +P+ W+S +Q +A+
Sbjct: 668 EPKTFKQAMDGPDHKLWKEAVEEELTSLKNMNVWELTDLPPGKSAIGCKWVFKIKYLADGSVERYKARLVAQGFTQEYGVDYNETYSPVVSLPTIRLFLKLAVENNWLVHQMDVKTAYLNGELKEEIYMRLPEGIITEESEKKVCRLLKSLYGLKQSGRAWYETLERKLLEGGMKKSKSESCIYFEKS-DGVIKIILVYVDDLILISSNLEAMSDMKIMLGRNFEMKDLGNLNYILGIEVKRQEDGSLFMNQWKYLQEIIT-AFHMIDCKSISSPMDPSQELSKSQCPITVQEKNEIANVPYRRLVGKLMYLAQATRPDIAFFVSKLGQFSSNPGKQHWAAAKRVLRYLKGTENYQLKITKDNDQ-----IIAHSDSDWAGSKDDRKSTTGFIIKIGRTPVIWKSNKQACIAL 1073
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 262 bits (670), Expect = 1.130e-76 Identity = 139/409 (33.99%), Postives = 241/409 (58.92%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKA--------NKVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSARRDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQGAVAV 1203
EP+T EAL GP+A++W EAM +E+ L + P DRK V +V+K+KH ADGS+ER+K RLVA+GF+Q+ VD+ +TFSPV + +R+V+A +V+ G +H +D T A+LN L+++++++ P+G VK NK LYGLKQS+ W L + G++ + +D C+Y + EDG + V+ +VDD G DE+I ++++++ ++ +D+G +LG+ + ++ + + Q +T SI+ + G + + +P+D L + +D E + + + A +G L++L+ TRPD+ +V + +A P HW + + RYL GT++ + Y+ N + D +G+SD+DW D+ R+S +G +G+ ++WRSK+Q VA+
Sbjct: 145 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKE-EDGNIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKK-YGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSA--VGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPD----CVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVAL 545
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A0A9WI29_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WI29_LYGHE) HSP 1 Score: 249 bits (636), Expect = 1.700e-74 Identity = 137/376 (36.44%), Postives = 220/376 (58.51%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKANKV------LYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSAR---RDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDW 1101
EP T ++A+ GP++D W+ AM++EL L + PP + + + +V+KIK+ ADG+VERYK RLVA+GFTQ+ VD+ +T+SPV L +R + AV + W IH +D AYLN L+E+I+++ PDG KV LYGLKQS WY++L K+L G + ++ C+YYRR + V ++L YVDD +E + M++ L ++ +DLG + +LG+ + + + L+Q+ + K I++E D + ++P++ ++ + + D+E + + PY ++GKLM+L+ TRPDL +V +LG ++ P HW + LRYL GT++ Y D D+ L+GYSDSDW
Sbjct: 25 EPKTFKQAMEGPESDLWKAAMEEELTSLEVMKVWEFTELPPGKTAIGSKWVFKIKYMADGTVERYKARLVAQGFTQKPGVDYEETYSPVISLPAIRLLFKLAVNNNWIIHQMDVKTAYLNGELKEEIYMKCPDGITGAEGKVCRLLRSLYGLKQSGRSWYEKLDEKLLEGGMNKCKSEPCIYYRRCNEN-VKIILVYVDDLILISSSEECMVEMKEMLRRNFDMKDLGELNYILGIEVKKGDHSLRLNQVKYIKEILSE-FNMSDCKSVSTPMETNYNIGKQHCPKSDEERKEMEKVPYRRLVGKLMYLSQATRPDLGFAVSKLGQFSSNPGKVHWMAAKRELRYLKGTMN----YEFIIDKGDDD-LVGYSDSDW 393
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 264 bits (674), Expect = 5.110e-74 Identity = 144/413 (34.87%), Postives = 246/413 (59.56%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDG-------HIV-KANKVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTE-GMGSLDLQITTSPLDPGVDLSARRDDKEELDCKLY---PYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQGAVAV 1203
EP+T EAL GP+A++W EAM +E+ L + P DRK V +V+K+KH ADGS+ER+K RLVA+GF+Q+ VD+ +TFSPV + +R+V+A +V+ G +H +D T A+LN L+++++++ P+G H+V K NK LYGLKQS+ W L + G++ + +D C+Y + EDG + V+ +VDD G DE+I ++++++ ++ +D+G +LG+ + ++ + + Q +T SI+ + GM + P++ VDLS++ E D +L+ Y + +G L++L+ TRPD+ +V + +A P HW + + RYL GT++ + Y+ N + D +G+SD+DW D+ R+S +G +G+ ++WRSK+Q VA+
Sbjct: 759 EPTTVSEALCGPNAERWHEAMQQEMDSLQEHDVWELTELPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKE-EDGDIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQEDAKVWIGQPTYTASIIKKYGMENC------KPVETPVDLSSKLVSAIE-DSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPD----CVGFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVAL 1159
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A383VEJ4_TETOB (Integrase catalytic domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VEJ4_TETOB) HSP 1 Score: 263 bits (671), Expect = 1.670e-73 Identity = 158/409 (38.63%), Postives = 225/409 (55.01%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGHI-------VKANKVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRR-SEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTE-GMGSLDLQITTSPLDPGVDLSARRDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQGAVA 1200
EP +EA + PDA W +AMD E+QG+ + G + PP K + T + +K+K +DGS ER K R+VA+GF QQ+ D+F+ F+PV MR++ A A IH++DF+ A+LN +L+E++W++ P+G++ K K LYGLKQ+ W+ L I +G+ S D CLYY SE LL YVDD A E + S Y+ RDLG + LG+ IT TGI L Q +V + GM + + ++ P+ PG L+ + +D E LD YPYA ++G L++LA TRPD+A V L A P M HW + VLRYLAGT ++Y+ S LIGY+DSD+ D + RRS G + + I W+SK+Q VA
Sbjct: 839 EPQNYKEATSRPDAPLWVDAMDTEIQGIRSNGTWVLGFPPPGTKVLDTKWTFKLKRNSDGSTERRKARVVAKGFQQQEGRDYFEIFTPVGKYTSMRALTAKAAAEDLIIHNIDFSSAFLNGTLEEEVWIKQPEGYVEGEPGMACKLVKSLYGLKQAPRAWHLNLDKIIQEKGFKPSEADPCLYYHTGSEYHPETYLLVYVDDVAIYTKSQESANALISYFSSKYKLRDLGAAELFLGISITRQPTGIKLAQERMINDLVAKYGMENSNGRLL--PMSPGTKLT-KDEDSEPLDTSKYPYATLVGALLYLANCTRPDIAYPVGVLARFMANPGMSHWHAAKGVLRYLAGTSTYGLNYSKAGSSS---TLIGYTDSDFAGDADTRRSTAGFTFIKGNAAICWQSKRQPTVA 1241
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: Q53NX4_ORYSJ (Retrotransposon protein, putative, Ty1-copia sub-class n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q53NX4_ORYSJ) HSP 1 Score: 251 bits (641), Expect = 5.420e-72 Identity = 140/404 (34.65%), Postives = 226/404 (55.94%), Query Frame = 1
Query: 4 PSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKAN--------KVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSA-RRDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQ 1188
P + EA A PDAD W+EA+ E+ + G + P KPV +V+K K + DG++E+YK RLVA+G+TQ++ DFF T+SPV L +R +L+ A HG +H +D A+LN L E+I+++ PDG +V+ K LYGLKQ+ +W+++ + G+ + D+C+YYR G +L YVDD G E I ++ L ++ +DLG+ D +L + + E GI L Q + + I+ G +D + + +P DP + L +R + +L+ Y+ I+G LM+LA TRPD++ +V +L + P HWR + V+RYL GT+++ +HY VL GYSDS+W +D++ ++ +G + G ++WRS +Q
Sbjct: 184 PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFVVNEADKCVYYRHGG-GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR-FGYIDSKPSPTPYDPSLLLRKNKRIARNQLE-----YSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYP-----AVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQ 575
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A5N6NFL8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFL8_9ASTR) HSP 1 Score: 244 bits (624), Expect = 5.680e-71 Identity = 137/408 (33.58%), Postives = 222/408 (54.41%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGH--------IVKANKVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSARRDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQGAVA 1200
EP T REA+ + +W+EA+ E+ + + PP KP+ +++K K KADGS+++YK RLV +GF Q++ +D+F T+SPV + +R VLA A +H +D A+LN L+E+I++E P+G + K K LYGLKQ+ +W+++ +L G+ + D+C+Y + + G V +L YVDD G D+ IK +D L + ++ +D+G+ D +LGV I + G++L Q + I+ E + D + +P+D LS R + Y+ I+G LM L TRPDLA +V L + P HW+ +LRYL T + +HY D V+ GYSD++W +D++ +S +G + G+ IAW+S +Q +A
Sbjct: 135 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSALGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYVKNTTRGYV-ILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMGLADVILGVKINRTQNGLVLSQSHYVDKIL-EKFNAGDTSVAQTPIDTTQHLSKNRGE----GVAQLEYSRIIGSLMCLMTCTRPDLAYAVSRLSRYTSNPSSEHWKSMIRLLRYLRYTRNYGLHYGR-----DPAVIEGYSDANWISDMKDSKSTSGYVFTLGGAAIAWKSSKQTLIA 531
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: Q10G43_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q10G43_ORYSJ) HSP 1 Score: 249 bits (635), Expect = 9.730e-71 Identity = 139/404 (34.41%), Postives = 226/404 (55.94%), Query Frame = 1
Query: 4 PSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIVKAN--------KVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSA-RRDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQ 1188
P + EA A DAD W+EA+ E+ + G + P KPV +V+K K + DG++E+YK RLVA+G+TQ++ DFF T+SPV L +R +L+ A HG +H +D A+LN L E+I+++ PDG +V+ K LYGLKQ+ +W+++ + G++ + D+C+YYR G +L YVDD G E I ++ L ++ +DLG+ D +L + + E GI L Q + + I+ G +D + + +P DP + L +R + +L+ Y+ I+G LM+LA TRPD++ +V +L + P HWR + V+RYL GT+++ +HY VL GYSDS+W +D++ ++ +G + G ++WRS +Q
Sbjct: 215 PKSISEAYASRDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQMDVKTAFLNGELDEEIYMDQPDGFVVEGQEGKVCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYYRHGG-GEGVILCLYVDDILIFGTNLEVINEVKSFLSQNFDMKDLGVADVILNIKLIRGENGITLLQSHYVEKILNR-FGYIDSKPSPTPYDPSLLLRKNKRIARNQLE-----YSQIIGSLMYLASATRPDISFAVSKLSRFTSNPGDDHWRALERVMRYLKGTVELGLHYTGYP-----AVLEGYSDSNWISDVDEIKATSGYVFTLGGGAVSWRSCKQ 606
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A5N6MBP8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBP8_9ASTR) HSP 1 Score: 246 bits (629), Expect = 9.870e-71 Identity = 137/408 (33.58%), Postives = 223/408 (54.66%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGH--------IVKANKVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSARRDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQGAVA 1200
EP T REA+ + +W+EA+ E+ + + PP KP+ +++K K KADGS+++YK RLV +GF Q++ +D+F T+SPV + +R VLA A +H +D A+LN L+E+I++E P+G + K K LYGLKQ+ +W+++ +L G+ + D+C+Y + + G V +L YVDD G D+ IK +D L + ++ +D+G+ D +LGV I + G++L Q + I+ E + D + +P+D LS R + Y+ I+G LM+L TRPDLA +V L + P HW+ +LRYL T + +HY D V+ GYSD++W +D++ +S +G + G+ IAW+S +Q +A
Sbjct: 135 EPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQWHQKFDQVMLNNGFKINECDKCVYVKNTTRGYV-ILCLYVDDMLIVGSDDKMIKSTKDMLKARFDMKDMGLADVILGVKINRTQNGLVLSQSHYVDKIL-EKFNAGDTSVAQTPIDTTQHLSKNRGE----GVAQLEYSRIIGSLMYLMTCTRPDLAYAVSRLSRYTSNPSSEHWKSMIRLLRYLRYTRNYGLHYGR-----DPAVIEGYSDANWISDMKDSKSTSGYVFTLGGAAIAWKSSKQTLIA 531
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Match: A0A445J0X7_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Glycine soja TaxID=3848 RepID=A0A445J0X7_GLYSO) HSP 1 Score: 242 bits (618), Expect = 4.000e-70 Identity = 145/451 (32.15%), Postives = 244/451 (54.10%), Query Frame = 1
Query: 1 EPSTTREALAGPDADKWQEAMDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVARGFTQQQRVDFFQTFSPVFGLDVMRSVLATAVRHGWAIHSLDFTQAYLNASLQEDIWLELPDGHIV--------KANKVLYGLKQSALEWYKELRSKILGEGWSSSANDECLYYRRSEDGRVAVLLTYVDDTAFTGDYDEEIKRMRDTLLSTYEGRDLGIPDQLLGVWITTDETGIILDQLLHTKSIVTEGMGSLDLQITTSPLDPGVDLSARRDDKEELDCKLYPYANILGKLMFLAGMTRPDLASSVWELGHCAAPPCMRHWRGQQHVLRYLAGTLDVCIHYAANTDSDDERVLIGYSDSDWGNDIEMRRSVTGCILLYDGSPIAWRSKQQGAVA---VEHGGRVDGDGTRNAALHFLRNILGEI---DRGLGTIGVH 1311
+PS +EAL+ DAD WQEA++ E+ L + + PP KP+ ++ K K K DG+V++YK RLVA+GF Q++ VDFF TFSPV + +R +++ A H +H +D A+LN L+E+I++E P+G ++ K +K LYGLKQ+ +W+++ + I+ G+ + +D+C+YY+ S + ++ YVDD G + ++ L + ++ +DLG +LG+ IT + GI LDQ + + I+ + D + ++P DP V L + + YA+I+G L + TRPD+A V L + P M HW + V+RYL T+++ +HY VL GY+D+DW ++ +G I G ++W+SK+Q +A +E+ + T +LR++L EI +R + T+ +H
Sbjct: 29 DPSNLQEALSSLDADLWQEAINDEMDSLESNKTWHLVDLPPGCKPIGCKWILKKKLKPDGTVDKYKARLVAKGFRQRENVDFFDTFSPVTRITSIRVLISLAAIHSLVVHQMDVKTAFLNGELEEEIYMEQPEGFVIHGQEDKVYKLDKSLYGLKQAPKQWHEKFDNLIVSNGFKVNESDKCIYYK-SVNNICTIICVYVDDLLIFGSNIHVVNNVKSLLCNNFDMKDLGEASVILGIKITRSKEGISLDQSHYIEKILKK-YDYFDCKPASTPYDPSVKLFKNTGE----GIRQTEYASIIGSLRYATDCTRPDIAYVVGLLCRFTSRPSMEHWHAIERVMRYLKRTINLGLHYKRFP-----AVLEGYNDADWNILSYDSKATSGYIFSIAGGAVSWKSKKQTILAQSTMEY--EMMALATAGEEASWLRSLLAEIPLWERSIPTVLIH 466 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20508.1 >prot_S-ischiensis_contig9.20508.1 ID=prot_S-ischiensis_contig9.20508.1|Name=mRNA_S-ischiensis_contig9.20508.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=435bp MDKELQGLWNKGAFSDEPAPPDRKPVKTHYVYKIKHKADGSVERYKVRLVback to top mRNA from alignment at S-ischiensis_contig9:906199..907676+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20508.1 ID=mRNA_S-ischiensis_contig9.20508.1|Name=mRNA_S-ischiensis_contig9.20508.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=1478bp|location=Sequence derived from alignment at S-ischiensis_contig9:906199..907676+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:906199..907676+ >mRNA_S-ischiensis_contig9.20508.1 ID=mRNA_S-ischiensis_contig9.20508.1|Name=mRNA_S-ischiensis_contig9.20508.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2610bp|location=Sequence derived from alignment at S-ischiensis_contig9:906199..907676+ (Schizocladia ischiensis KU_0333)back to top |