mRNA_S-ischiensis_contig9.20472.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: A0A6H5JHA7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHA7_9PHAE) HSP 1 Score: 108 bits (269), Expect = 4.860e-25 Identity = 56/106 (52.83%), Postives = 74/106 (69.81%), Query Frame = -1
Query: 16 SYFLYLLRTNFPKLWDDTVLADGGAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTEDLVYYTGAGAKQ 333
+YFL++LRT+FP++W V V+CVPQS+SL+ LT +A HVL PS E PGDF+TL+G VS+VG+EVVT GF E RRVRLL++EDL + A K+
Sbjct: 100 AYFLHMLRTDFPEIWAAVVAGTVDTVICVPQSTSLSQEDLTAAEARAHVLTPSE-EVPGDFLTLDGWSVSLVGNEVVTGAGFPEWRRVRLLLSEDLGQHLAAAGKE 204
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 8.840e-22 Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = -1
Query: 19 LLRTNFPKLWDDTVLADGGAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTEDL-VYYTGAGAK 318
+LR +FP++W V G V+CVPQS+SL+ LT +A HVL PS E PGDF+TL+G VS+VG+EVVT GF E RRVRLL++EDL + AG K
Sbjct: 1 MLRMDFPEIWAAVVAGTGDTVICVPQSTSLSQEDLTAAEARAHVLTPSE-EVPGDFLTLDGWSVSLVGNEVVTGAGFPEWRRVRLLLSEDLGQHLVAAGEK 100
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: A0A7S3YG70_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG70_HETAK) HSP 1 Score: 77.4 bits (189), Expect = 4.650e-15 Identity = 41/97 (42.27%), Postives = 67/97 (69.07%), Query Frame = -1
Query: 46 NSYFLYLLRTNFPKLWDDTVLADGGAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTEDL 336
++ FL +LRT+FPK+W + D +VC PQS+SL P +T ED +THV+ + T+ G++ +LN ++V++VG E+VT+ G+ PR VR+L ++L
Sbjct: 51 DALFLLVLRTSFPKVWQWLLAND--CMVCCPQSASL-PQTITLEDVQTHVV--TQTKIAGEYESLNNKVVTMVGAEMVTQRGYPAPRTVRVLRVDEL 142
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: A0A1V9ZZ16_9STRA (VPS9 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZ16_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 6.880e-13 Identity = 42/98 (42.86%), Postives = 56/98 (57.14%), Query Frame = -1
Query: 49 MNSYFLYLLRTNFPKLWDDT-VLADGGAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTED 339
M+ FL + N P L V D ++C+PQS SL G +T D ETH LLP G + TLNG+ V+I G + T+ GF EPR VR+L+TE+
Sbjct: 1 MDDPFLRSFQANLPVLLKKIHVQVDTKCLICIPQSVSLLSGVITINDLETHFLLPDAKL--GQYQTLNGKHVAIAGTHIHTKNGFREPRIVRILITEE 96
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: A0A485KDP6_9STRA (Aste57867_5972 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDP6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 7.340e-11 Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = -1
Query: 40 VVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTEDLVY 258
+VC+PQS SL G ++ ED HVL+P P G + TL+G+ V+I G VVT++GF+E R +R+L+T++ +
Sbjct: 38 LVCIPQSLSLLSGTVSAEDLFAHVLVPDPDV--GHYQTLDGKHVAIAGSYVVTKDGFVEARTIRILMTDEFTH 108
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: A0A8K1CEM3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CEM3_PYTOL) HSP 1 Score: 67.8 bits (164), Expect = 7.350e-11 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = -1
Query: 52 LADGGAVVCVPQSSSL-APGHLTREDAETHVLLPSPTET---PGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTE 276
L V CVPQ+ SL A ++++D TH LLP T PG + TLNG+ VSI+G +V TR GF EPR+VR+L++E
Sbjct: 23 LLPSNCVFCVPQARSLVADVAVSQDDVFTHFLLPVSRGTEQQPGQYETLNGKTVSIIGSQVHTRRGFDEPRKVRILLSE 101
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: X6NXT3_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6NXT3_RETFI) HSP 1 Score: 62.0 bits (149), Expect = 7.260e-9 Identity = 36/96 (37.50%), Postives = 56/96 (58.33%), Query Frame = -1
Query: 40 FLYLLRTNFPKLWDDTVLADGGAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTEDLVY 327
F L+R +L+D+ + G +CVP SSS+ G T E +THVL SP G++++ NGR V+I + T+ GF PR V ++++E+L Y
Sbjct: 60 FFQLIRDKHERLYDN--VCRNGWYICVPHSSSIEDGDFTDEFIKTHVLKNSP-HFKGEYISQNGRSVTIEKGVISTKAGFNSPREV-VILSEELFY 151
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: A0A7S2FSU3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FSU3_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 1.120e-8 Identity = 32/74 (43.24%), Postives = 51/74 (68.92%), Query Frame = -1
Query: 106 FLYLLRTNFPKLWDDTVLADGGAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEV 327
FLY+LRT +P+LW+ T+ A+ VV VP+S+++ LT D ETH+L PT+ PG++ T + V+I+G+E+
Sbjct: 52 FLYILRTEYPELWE-TIEANSATVV-VPRSTAIGID-LTLADVETHILY--PTKIPGEYRTSRNQCVAIIGNEL 120
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: T0REC7_SAPDV (VPS9 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0REC7_SAPDV) HSP 1 Score: 58.2 bits (139), Expect = 1.730e-7 Identity = 30/76 (39.47%), Postives = 48/76 (63.16%), Query Frame = -1
Query: 49 ADG-GAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTED 273
ADG ++C+PQS SL ++R +TH LLP G + +LNG+ +++VG + T+ GF + R VR+L+TE+
Sbjct: 30 ADGLKCLMCIPQSLSLLTAAISRTQLQTHFLLPDAQV--GQYRSLNGKQIAVVGAHIHTKAGFHDARVVRILMTEE 103
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Match: A0A067BVU2_SAPPC (VPS9 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BVU2_SAPPC) HSP 1 Score: 57.4 bits (137), Expect = 3.030e-7 Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = -1
Query: 49 ADG-GAVVCVPQSSSLAPGHLTREDAETHVLLPSPTETPGDFVTLNGRMVSIVGDEVVTREGFLEPRRVRLLVTED 273
ADG +VCVPQS SL ++ +TH LLP G + +LNG+ +++VG + T+ GF + R VR+L+TE+
Sbjct: 29 ADGLKCLVCVPQSLSLLTAAVSLSQLQTHFLLPDAQV--GQYRSLNGKQIAVVGAHIHTKAGFRDARVVRILMTEE 102 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20472.1 >prot_S-ischiensis_contig9.20472.1 ID=prot_S-ischiensis_contig9.20472.1|Name=mRNA_S-ischiensis_contig9.20472.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=114bp RGPLALLGPGSGVVHQVLCDEQTDTAWLEEALTGHHLVSNDADHAAVESDback to top mRNA from alignment at S-ischiensis_contig9:609052..609393+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20472.1 ID=mRNA_S-ischiensis_contig9.20472.1|Name=mRNA_S-ischiensis_contig9.20472.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=342bp|location=Sequence derived from alignment at S-ischiensis_contig9:609052..609393+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:609052..609393+ >mRNA_S-ischiensis_contig9.20472.1 ID=mRNA_S-ischiensis_contig9.20472.1|Name=mRNA_S-ischiensis_contig9.20472.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=684bp|location=Sequence derived from alignment at S-ischiensis_contig9:609052..609393+ (Schizocladia ischiensis KU_0333)back to top |