mRNA_S-ischiensis_contig9.20413.1 (mRNA) Schizocladia ischiensis KU_0333
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Overview
Homology
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: D8LFE3_ECTSI (Abortive infection protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFE3_ECTSI) HSP 1 Score: 347 bits (889), Expect = 8.850e-108 Identity = 186/318 (58.49%), Postives = 228/318 (71.70%), Query Frame = 2
Query: 152 KRRGGEALGGVNLELMRILVTGEIAVGVAAAVLSAILKVDPATNLDLSPFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGVLALNASLFEELLFRGVIQQFLSTTFLGAVPSLLVTSALFGLAHSPVPGASTYTEALYGLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAVQPLNDAFPDPPTVARRVRALMSEFKLDPKFVDMNRAVFVQLDLDNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLITLNYIKVAQ 1105
K +G L G NLELMRILV GE+AVG AAA L+ + KV+P S AL G +GALP F+ SVLLE+SGV FF+KIDQDTKLYV+QVFGAK N PVV+ W+ VLA NA FEE+LFRGVIQQ LST +G +P+L+++S LFGLAHSPVPGAS++TEA YG NFGLLY+ +GGNL VP++AH +YD+LTFLEVH RAT +L L P R V ++ +F L KFVDM+ +F QLDLD +G IDQ+ELQLGLRTFGKF S ET +MREAD+D N L+FDE++RL+ LNY + Q
Sbjct: 75 KPKGSGMLQGPNLELMRILVQGEVAVGTAAAGLAFLTKVNPFAGTLFSWAALKAGCLGALPIFLVSVLLEKSGVDFFRKIDQDTKLYVVQVFGAKRNWPVVSLWSFVLAANAGFFEEVLFRGVIQQGLST-LIGGIPALVISSVLFGLAHSPVPGASSFTEACYGANFGLLYMMSGGNLLVPIIAHVLYDMLTFLEVHQRATAQLETTL---------RGDLPQKEQEKRNVATVVKKFNLSKKFVDMSYGIFQQLDLDKNGVIDQKELQLGLRTFGKFASAEETRQIMREADLDKNNALTFDEWVRLLALNYSALLQ 382
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: A0A836CHD9_9STRA (CAAX protease self-immunity-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD9_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.310e-78 Identity = 145/322 (45.03%), Postives = 214/322 (66.46%), Query Frame = 2
Query: 170 ALGGVNLELMRILVTGEIAVGVAAAVLSAILKVDPATNLDLSPFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGVLALNASLFEELLFRGVIQQFLSTTFLGAVPSLLVTSALFGLAHSPVPGASTYTEALYGLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAVQPLNDAFPDPPTVA------RRVRALMSEFKLDPKFVDMNRAVFVQLDLDNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLITLNYIKVAQVLAQ 1117
AL GVN L+R LV GE+AV AAV++ L ++P S ++ + A+P FVGSV+LERS + F++ID+DT+L+V+Q+FGAK ++ + A ++A +A + EE+LFRG+IQ LS ++G VP+LLV S LFGLAH+PVPGAS+ EA+YG FG LY+ATGGNL P+++HF+YDL TF+EVH RAT + + V P A +A +RV+ ++ + L FV VF LDLD +GT+D+RELQLG+RTFG+F ++ + A+ + AD++ +GE+SFDEFL+L+T ++ ++ A+
Sbjct: 20 ALSGVNNGLVRTLVQGEVAVLAVAAVIATFLNINPVAGFAPSLEGISSAIAYAIPIFVGSVVLERSNIKLFKEIDRDTQLFVVQIFGAKRSLSNILPAAAIMAASAGIAEEILFRGIIQNGLSN-YIGDVPALLVASLLFGLAHNPVPGASSLVEAIYGFTFGSLYIATGGNLFAPILSHFLYDLATFVEVHFRATSRIGVA---AAGVPPQPAAASQASGMAARVLQDKRVQDVIKRYGLPAPFVKNAIGVFGMLDLDKNGTLDRRELQLGVRTFGRFTNDEQLDAIYKRADLNQDGEISFDEFLKLLTDAVLQQQRLAAE 337
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: A0A0G4EAR4_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EAR4_VITBC) HSP 1 Score: 187 bits (474), Expect = 1.500e-48 Identity = 114/305 (37.38%), Postives = 162/305 (53.11%), Query Frame = 2
Query: 185 NLELMRILVTGEIAVGVAAAVLSAILK-VDPATNLDLSPFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGVLALNASLFEELLFRGVIQQFLSTTFLGAVPS-LLVTSALFGLAHSPVPGASTYTEALYGLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAVQPLNDAFPDPPTVARRVRALMSEFKLDPKFVDMNRAVFVQLDLDNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLITLNYI 1093
NL+L+ V GE + A + + +DP L A+ GV+ +LP LL+ F+KID+DTK VL +FG + N+P VA A LA A EE LFRG + + G PS LL++S LFG+AHSPVPGA + EA+YGL FG++Y GN+ VP++AH YD +TFL VH+RAT ++ + + P R + + E L +F +A F LDLD SG I + EL+LGLR F L + + + D DG+G++ F+EFL +T +
Sbjct: 89 NLQLVASFVIGEALLAAATFGTAYFVPFLDPFFGSHLDQEAVVQGVLWSLPLVAFGFLLDNLPWKIFKKIDRDTKFLVLALFGKEANLPTVALLAATLAGAAGFAEEALFRGTLLPLFNLPLFGGFPSGLLISSFLFGVAHSPVPGADAFLEAVYGLWFGVIYYMADGNIWVPMIAHAFYDFVTFLWVHVRATSRVKQLTESVS------------PEALREMEMQVRE-SLPAEFARFAKATFQMLDLDGSGGITKEELRLGLRVFSNRLRDEDVDNLFAAMDRDGSGQIDFNEFLSFVTKRLV 380
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: A0A7S0GK01_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GK01_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.040e-21 Identity = 87/284 (30.63%), Postives = 140/284 (49.30%), Query Frame = 2
Query: 296 PFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGVLALNASL---FEELLFRGVIQQFLST------------TFLGAVPSLLVTSALFGLAHSPVPGASTYTEA--LYGLN------FGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAVQPLNDAFPDPPTVARRVRALMSEFKLDPKFVDMNRAVFVQLDLDNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLI 1078
P+ +G++G LP + S +E S P ++ T + VL++FGAK +P+V G+ AL A L EE +FRG L++ F+GA+ S ++ + L S + G +A L+GL F LLYL T +LAVP+VAH +YDL TF H+ + +L A+ P T+ + R + +F++ + F +D + G + + EL++G+ +FG LSE E+ V + AD+D +G + FDEFL +
Sbjct: 97 PYVYLIGILGVLPLILLSRQIETSESPIVANLNLSTNMLVLRLFGAK-QLPIVGF--GISALLAGLTGIVEETIFRGEALPGLASWSKVTLGAGENGIFIGAILSTMLFAILHVNPKSFISGKEAIVDAGVLFGLQLCTGGTFCLLYLVTR-DLAVPIVAHTLYDLYTFYGTHLEVSSQLEYA--DAQAILPQGTTT----TIESKWRKERGD-----EFIESTKQCFYLMDTNRDGVLTRSELRVGMYSFGIRLSEVESERVTQGADIDESGAIDFDEFLEFV 365
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: A0A7S1YIE3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YIE3_9STRA) HSP 1 Score: 107 bits (268), Expect = 2.640e-21 Identity = 100/346 (28.90%), Postives = 161/346 (46.53%), Query Frame = 2
Query: 104 PLSMSRTPTPGPSDT-SKRRGGEALGGVNLELMRILVTGEIAVGVAAAVLSAILKVDPATNLDLSPFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGV-LALNASLFEELLFRG----VIQQFLSTTF-------LGAVPSLLVTSALFGLAHSPVPGASTYTEALY--------GLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAVQPLNDAFPDPPTVARRVRALMSEFKLDPKFVDMNRAVFVQLDLDNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLI 1078
P+SMSR+PT T S + G+ VN+ L+ L + +G A L+ D P +LALGV+G P + S +E S P ++ T + VL++FG K P++A + V L L EE+ FRG + Q+ +T F G S L+ +AL + G + + L G F LYL+T NLAVP++AH +YD +TF + H+ G++ ++ P T R +E +FV+ R F +D + G + ++EL++ L ++G LS+ E+ + + AD+D +G + F EFL +
Sbjct: 39 PMSMSRSPTKLYMATESNKNEGKKGPPVNIGLIGQLAANQALIGSTIWTGGAGLQ-TLTQYADFGPISLALGVLGLAPLLLFSRQVETSESPLAAGLNLSTNMAVLRLFGDKPQ-PILAFFVSVFLGGITGLVEEVTFRGQLLPALAQWSTTAFGVDDGTLFGVALSTLIFAALHANPSGLLKGGDAFLDNLVLLGFQIVTGAIFATLYLSTQ-NLAVPIIAHSLYDFVTFYKTHLDIAGQMEYASNEKLM----------PSTEFREEGKWKTE--RSEEFVEGARETFYLMDTNKDGVLSRKELRVALFSYGINLSKMESEMIRKVADLDESGAIDFGEFLEFV 369
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: A0A7S2E028_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E028_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.790e-19 Identity = 97/324 (29.94%), Postives = 145/324 (44.75%), Query Frame = 2
Query: 182 VNLELMRILVTGEIAVGVAAAVLSAILKVDPA-----TNLDLSPFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGV-LALNASLFEELLFRGVIQQFLST-----------TFLGAVPSLLVTSALFGLAHSPVPGASTYTEALY--------GLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAVQPLNDAFPDPPTVARRVRALMSEFKLDPKFVDMNRAVFVQLDLDNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLI 1078
VNL L+ L G+ VG S IL P N P A+ LGV G+ L+E S P I+ T + VL++FG+K PV A + L + EE+ FRG + LS+ GA S L+ + L +S + G + L G+ F +L+L T NLAVP+VAH +YD TF + H+ T ++ + + N A + R+ E KFV R +F +D + G + ++EL++ L ++G LS+ +A V R AD+D +G + F EFL I
Sbjct: 86 VNLGLVGQLALGQAIVG------STILFGGPGYQALIENASFGPLAILLGVAGSALLISFGSLVENSEAPQLAGINLSTNMVVLRLFGSKPQ-PVAAFFVSAFLGGLTGIVEEVTFRGQLLPTLSSWSSTMGMGDKGVIFGAALSTLIFALLHTNPNSLLKGGEASQDNLVLLVFQLITGIIFAILFLTTE-NLAVPIVAHALYDFWTFFKTHLNITSQIDYARKEVN-MPSANFAG------EAKWRSQRGE-----KFVQEAREMFYLMDTNQDGVLSRKELRVALYSYGMNLSKMGSAKVARVADMDRSGSIDFGEFLEFI 389
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: A0A7S4JRQ3_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JRQ3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.330e-15 Identity = 78/282 (27.66%), Postives = 134/282 (47.52%), Query Frame = 2
Query: 275 ATNLDLSPFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGVLALNASLFEELLFRGVIQQFLSTTFLGAVP-SLLVTSALFGLAH-SPVP----GASTYTEA--------LYGLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAVQPLNDAFPDPPTVARRVRALMSEFKLDPKFVDMNRAVFVQLDLDNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLI 1078
A +P ++ +GV + S ++E S ++ +T L VL++FG + + ++A L EE +FRG I Q L G+V ++ +++ LF + H +P+ GA +A + GL F ++ L TG NLAVP+VAH ++D H+ T +++ VL ++ P+ P R V A + D F+ + + F D + G + ++EL++ L ++G LS E+ V ADVD +G + F EFL +
Sbjct: 118 AAEASFTPASILVGVAATVLLVAFSRVIETSESRSVADLNLNTNLLVLRLFGTEPQPFAAFVVSALVAGLTGLVEETVFRGEILQRLLAWSDGSVTVAVALSTILFAVLHVNPIGIFKGGAQDVQDAAVLVAYQIVTGLAFAIMLLLTG-NLAVPIVAHSLFDFYILFFTHLSITSQMQYVLQES--------LMPEAP---RGVEAKWRSRRGDD-FLMVCKETFYLADSNRDGLLSRQELRIALYSYGIRLSRGESEIVATAADVDRSGAIDFSEFLEFV 386
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: R1BUJ6_EMIHU (Putative abortive infection protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BUJ6_EMIHU) HSP 1 Score: 86.7 bits (213), Expect = 2.920e-14 Identity = 99/347 (28.53%), Postives = 149/347 (42.94%), Query Frame = 2
Query: 182 VNLELMRILVTGEIAVG-------VAAAVLSAILKVDPATNLDLSPFALALGVVGALPPFVGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGV-LALNASLFEELLFRGVIQQFLSTTFLGAVPSLLVTSALFGLAH----SPVPGASTYTE---------------------ALYGLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVHMRATGELRMVLDKTGAV--------QPLNDAFPDPPTVARRVRALMSEFKLDPKFVDMNRAVFVQLDL-------DNSGTIDQRELQLGLRTFGKFLSESETAAVMREADVDGNGELSFDEFLRLI 1078
VN+ L+R L ++ +G AAVL+ D S AL LGV+G LP S +ERS ++ T L VL++FG++ PV+A A + LA L EE FRG I L+ G + +++ALF H +P+ G++ G F LLY+ +G NLAVP++AH +YD TF H+ E + + Q L + P A R R + + + A L L +G + ++EL++ L ++G LS E+AAV+R AD D +G + F EFL +
Sbjct: 40 VNVGLVRQLTLNQLLIGWTIWSGGEGAAVLARDAHFD-------SLLALPLGVLGVLPLIFISRKIERSESGVVADLNLSTNLLVLRLFGSEKQ-PVLALAASLFLACLTGLVEETTFRGEILPSLAQGN-GLAGGVSLSTALFAALHVNPKAPLEGSAPSRRLPRNLAPSLAAGAARGRAEHRGRSGATFALLYVMSG-NLAVPILAHSLYDCYTFYGTHLEIQLECTFLGPSSSVAGQMEYAKAQALMPSLPGSSGAAWRQRRGEAFLQSAAESAPALPAASPPLSLLPPHPAPACTGVVSRKELRIALYSYGVRLSGGESAAVLRAADADESGGVDFSEFLEFV 376
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: K0TIM6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TIM6_THAOC) HSP 1 Score: 77.4 bits (189), Expect = 2.130e-11 Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 2
Query: 281 NLDLSPFALALGVVGALPPF--VGSVLLERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGVLALNASLFEELLFRGVIQQFLSTTFLGAVPSLLVTSALFGLAHSPVPGASTYTEALYGLNFGLLYLATGGNLAVPLVAHFVYDLLTFLEVH 745
++P A+ G+ +P F G + + P Q + + T+ VL V G K + A++ +L L A + EELLFRGV Q LST + +L ++ +FGL H+ P + A + FG +Y+ TG NLA+P+VAH +YD+ + H
Sbjct: 192 GFSVNPAAILQGLQYCVPLFGLAGIMRVIEPYSPALQGVTKATERTVLFVMGKKRRLGFALAFSILLGLCAGVGEELLFRGVFQTLLSTKLGSSNSALCISGVVFGLLHAVTPLYALLAGAA-SVFFGYIYITTG-NLAIPMVAHTIYDVGALIWAH 346
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Match: A0A7S1B4M4_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B4M4_9STRA) HSP 1 Score: 74.7 bits (182), Expect = 1.600e-10 Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 2
Query: 359 ERSGVPFFQKIDQDTKLYVLQVFGAKTNIPVVAAWAGV-LALNASLFEELLFRGVIQQFLSTTF-LGAVPSLLVTSALFGLAHSPVPGASTYTEALYGLNFGLLYLATG-GNLAVPLVAHFVYDLLTFLEVHMRATG 760
E S + F+K+ + T+ VL G++ + A V L L A + EELLFRGV+Q ++ +G +PSL +TS +FGL H P + L L FG +Y+ NL +P+V H +YD++ + H TG
Sbjct: 204 ENSIIASFKKVTEATQTSVLSFLGSERKLFPEAFITSVGLGLAAGVGEELLFRGVLQSAITENIGVGPIPSLFLTSIIFGLLHFATP-LYAFLAFLASLYFGSMYMDPNVDNLIIPMVCHTLYDVVALMYAHYAVTG 339 The following BLAST results are available for this feature:
BLAST of mRNA_S-ischiensis_contig9.20413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_S-ischiensis_contig9.20413.1 >prot_S-ischiensis_contig9.20413.1 ID=prot_S-ischiensis_contig9.20413.1|Name=mRNA_S-ischiensis_contig9.20413.1|organism=Schizocladia ischiensis KU_0333|type=polypeptide|length=348bp MSRTPTPGPSDTSKRRGGEALGGVNLELMRILVTGEIAVGVAAAVLSAILback to top mRNA from alignment at S-ischiensis_contig9:278041..288886+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_S-ischiensis_contig9.20413.1 ID=mRNA_S-ischiensis_contig9.20413.1|Name=mRNA_S-ischiensis_contig9.20413.1|organism=Schizocladia ischiensis KU_0333|type=mRNA|length=10846bp|location=Sequence derived from alignment at S-ischiensis_contig9:278041..288886+ (Schizocladia ischiensis KU_0333)back to top Coding sequence (CDS) from alignment at S-ischiensis_contig9:278041..288886+ >mRNA_S-ischiensis_contig9.20413.1 ID=mRNA_S-ischiensis_contig9.20413.1|Name=mRNA_S-ischiensis_contig9.20413.1|organism=Schizocladia ischiensis KU_0333|type=CDS|length=2088bp|location=Sequence derived from alignment at S-ischiensis_contig9:278041..288886+ (Schizocladia ischiensis KU_0333)back to top |